RNA–Protein interactions for RNA: ENST00000467326.5

VPS50-209, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 4

Gene VPS50, Length 574 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-209ENST00000467326 LINS1Q8NG48 757 aa4.01□□□□□ -1.77
VPS50-209ENST00000467326 ADAMTS15Q8TE58 950 aa4.01□□□□□ -1.77
VPS50-209ENST00000467326 SDCCAG3Q96C92 435 aa4.01□□□□□ -1.77
VPS50-209ENST00000467326 URB1-AS1Q96HZ7 61 aa4.01□□□□□ -1.77
VPS50-209ENST00000467326 RBM17Q96I25 401 aaKnown RBP4.01□□□□□ -1.77
VPS50-209ENST00000467326 ZMAT2Q96NC0 199 aaKnown RBP4.01□□□□□ -1.77
VPS50-209ENST00000467326 TEFMQ96QE5 360 aaKnown RBP4.01□□□□□ -1.77
VPS50-209ENST00000467326 POLDIP3Q9BY77 421 aaKnown RBP4.01□□□□□ -1.77
VPS50-209ENST00000467326 MRPL9Q9BYD2 267 aaKnown RBP4.01□□□□□ -1.77
VPS50-209ENST00000467326 DCLK3Q9C098 648 aa4.01□□□□□ -1.77
VPS50-209ENST00000467326 RMI1Q9H9A7 625 aa4.01□□□□□ -1.77
VPS50-209ENST00000467326 ANKEF1Q9NU02 776 aa4.01□□□□□ -1.77
VPS50-209ENST00000467326 NSMCE4AQ9NXX6 385 aa4.01□□□□□ -1.77
VPS50-209ENST00000467326 PLK2Q9NYY3 685 aa4.01□□□□□ -1.77
VPS50-209ENST00000467326 KIF17Q9P2E2 1029 aa4.01□□□□□ -1.77
VPS50-209ENST00000467326 ZNF580Q9UK33 172 aa4.01□□□□□ -1.77
VPS50-209ENST00000467326 TMCC3Q9ULS5 477 aa4.01□□□□□ -1.77
VPS50-209ENST00000467326 PCDHA7Q9UN72 937 aa4.01□□□□□ -1.77
VPS50-209ENST00000467326 SNX5Q9Y5X3 404 aa4.01□□□□□ -1.77
VPS50-209ENST00000467326 SYNDIG1LA6NDD5 238 aa4□□□□□ -1.77
VPS50-209ENST00000467326 TSPY2A6NKD2 308 aa4□□□□□ -1.77
VPS50-209ENST00000467326 C17orf100A8MU93 164 aa4□□□□□ -1.77
VPS50-209ENST00000467326 B4DLN1 442 aa4□□□□□ -1.77
VPS50-209ENST00000467326 STMND1H3BQB6 276 aa4□□□□□ -1.77
VPS50-209ENST00000467326 EIF3FO00303 357 aaPredicted RBP4□□□□□ -1.77
VPS50-209ENST00000467326 RGS14O43566 566 aa4□□□□□ -1.77
VPS50-209ENST00000467326 SPRY3O43610 288 aa4□□□□□ -1.77
VPS50-209ENST00000467326 HBP1O60381 514 aa4□□□□□ -1.77
VPS50-209ENST00000467326 MYZAPP0CAP1 466 aa4□□□□□ -1.77
VPS50-209ENST00000467326 TSPY3P0CV98 308 aa4□□□□□ -1.77
VPS50-209ENST00000467326 TSPY8P0CW00 308 aa4□□□□□ -1.77
VPS50-209ENST00000467326 ARSAP15289 507 aa4□□□□□ -1.77
VPS50-209ENST00000467326 AVPR1AP37288 418 aa4□□□□□ -1.77
VPS50-209ENST00000467326 SKIV2L2P42285 1042 aaKnown RBP4□□□□□ -1.77
VPS50-209ENST00000467326 MMP14P50281 582 aa4□□□□□ -1.77
VPS50-209ENST00000467326 MVDP53602 400 aa4□□□□□ -1.77
VPS50-209ENST00000467326 SNX16P57768 344 aa4□□□□□ -1.77
VPS50-209ENST00000467326 ZP1P60852 638 aa4□□□□□ -1.77
VPS50-209ENST00000467326 ACTR2P61160 394 aa4□□□□□ -1.77
VPS50-209ENST00000467326 TSPY1Q01534 308 aa4□□□□□ -1.77
VPS50-209ENST00000467326 NEXNQ0ZGT2 675 aa4□□□□□ -1.77
VPS50-209ENST00000467326 PKP1Q13835 747 aa4□□□□□ -1.77
VPS50-209ENST00000467326 AP5B1Q2VPB7 878 aa4□□□□□ -1.77
VPS50-209ENST00000467326 RILPL1Q5EBL4 403 aa4□□□□□ -1.77
VPS50-209ENST00000467326 CCDC158Q5M9N0 1113 aa4□□□□□ -1.77
VPS50-209ENST00000467326 CCDC30Q5VVM6 783 aa4□□□□□ -1.77
VPS50-209ENST00000467326 DCAF12L2Q5VW00 463 aa4□□□□□ -1.77
VPS50-209ENST00000467326 TMEM268Q5VZI3 342 aa4□□□□□ -1.77
VPS50-209ENST00000467326 HEPHL1Q6MZM0 1159 aa4□□□□□ -1.77
VPS50-209ENST00000467326 CRELD2Q6UXH1 353 aaPredicted RBP4□□□□□ -1.77
VPS50-209ENST00000467326 FTSJ3Q8IY81 847 aaKnown RBP4□□□□□ -1.77
VPS50-209ENST00000467326 TMEM57Q8N5G2 664 aa4□□□□□ -1.77
VPS50-209ENST00000467326 AFG1LQ8WV93 481 aa4□□□□□ -1.77
VPS50-209ENST00000467326 RSRC1Q96IZ7 334 aaKnown RBP4□□□□□ -1.77
VPS50-209ENST00000467326 ZNF333Q96JL9 665 aa4□□□□□ -1.77
VPS50-209ENST00000467326 APOLD1Q96LR9 279 aa4□□□□□ -1.77
VPS50-209ENST00000467326 BARD1Q99728 777 aaKnown RBP4□□□□□ -1.77
VPS50-209ENST00000467326 TREX2Q9BQ50 279 aaPredicted RBP4□□□□□ -1.77
VPS50-209ENST00000467326 ZPBPQ9BS86 351 aa4□□□□□ -1.77
VPS50-209ENST00000467326 FAM167BQ9BTA0 163 aa4□□□□□ -1.77
VPS50-209ENST00000467326 CENPOQ9BU64 300 aa4□□□□□ -1.77
VPS50-209ENST00000467326 CCDC68Q9H2F9 335 aa4□□□□□ -1.77
VPS50-209ENST00000467326 TSPY26PQ9H489 355 aa4□□□□□ -1.77
VPS50-209ENST00000467326 CHODLQ9H9P2 273 aa4□□□□□ -1.77
VPS50-209ENST00000467326 HIF1ANQ9NWT6 349 aa4□□□□□ -1.77
VPS50-209ENST00000467326 IFT80Q9P2H3 777 aaPredicted RBP4□□□□□ -1.77
VPS50-209ENST00000467326 FRMD4AQ9P2Q2 1039 aaPredicted RBP4□□□□□ -1.77
VPS50-209ENST00000467326 CFDP1Q9UEE9 299 aaPredicted RBP4□□□□□ -1.77
VPS50-209ENST00000467326 PLEKHB1Q9UF11 243 aaPredicted RBP4□□□□□ -1.77
VPS50-209ENST00000467326 CDH22Q9UJ99 828 aa4□□□□□ -1.77
VPS50-209ENST00000467326 FEM1BQ9UK73 627 aa4□□□□□ -1.77
VPS50-209ENST00000467326 ICKQ9UPZ9 632 aa4□□□□□ -1.77
VPS50-209ENST00000467326 DHDHQ9UQ10 334 aa4□□□□□ -1.77
VPS50-209ENST00000467326 RRP7AQ9Y3A4 280 aaKnown RBP4□□□□□ -1.77
VPS50-209ENST00000467326 FSD2A1L4K1 749 aa3.99□□□□□ -1.77
VPS50-209ENST00000467326 C17orf102A2RUQ5 167 aa3.99□□□□□ -1.77
VPS50-209ENST00000467326 OR6C75A6NL08 312 aa3.99□□□□□ -1.77
VPS50-209ENST00000467326 BECN2A8MW95 431 aa3.99□□□□□ -1.77
VPS50-209ENST00000467326 B4E171 279 aa3.99□□□□□ -1.77
VPS50-209ENST00000467326 INAFM1C9JVW0 142 aa3.99□□□□□ -1.77
VPS50-209ENST00000467326 MS4A18H0YCH9 400 aa3.99□□□□□ -1.77
VPS50-209ENST00000467326 STX16-NPEPL1H3BU86 382 aa3.99□□□□□ -1.77
VPS50-209ENST00000467326 STX16O14662 325 aa3.99□□□□□ -1.77
VPS50-209ENST00000467326 RNMTO43148 476 aaKnown RBP3.99□□□□□ -1.77
VPS50-209ENST00000467326 DKC1O60832 514 aaKnown RBP eCLIP3.99□□□□□ -1.77
VPS50-209ENST00000467326 CLDN7O95471 211 aa3.99□□□□□ -1.77
VPS50-209ENST00000467326 LCATP04180 440 aa3.99□□□□□ -1.77
VPS50-209ENST00000467326 MMP3P08254 477 aa3.99□□□□□ -1.77
VPS50-209ENST00000467326 TNNT1P13805 278 aa3.99□□□□□ -1.77
VPS50-209ENST00000467326 CCKBRP32239 447 aa3.99□□□□□ -1.77
VPS50-209ENST00000467326 GJC1P36383 396 aa3.99□□□□□ -1.77
VPS50-209ENST00000467326 PPP3CCP48454 512 aa3.99□□□□□ -1.77
VPS50-209ENST00000467326 EGR4Q05215 589 aa3.99□□□□□ -1.77
VPS50-209ENST00000467326 TRAF1Q13077 416 aa3.99□□□□□ -1.77
VPS50-209ENST00000467326 GPS2Q13227 327 aa3.99□□□□□ -1.77
VPS50-209ENST00000467326 BYSLQ13895 437 aaKnown RBP3.99□□□□□ -1.77
VPS50-209ENST00000467326 IL13RA2Q14627 380 aa3.99□□□□□ -1.77
VPS50-209ENST00000467326 DUSP6Q16828 381 aa3.99□□□□□ -1.77
VPS50-209ENST00000467326 SLC45A4Q5BKX6 768 aa3.99□□□□□ -1.77
VPS50-209ENST00000467326 DNTTIP2Q5QJE6 756 aaKnown RBP3.99□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms