RNA–Protein interactions for RNA: ENST00000466032.1

CHMP3-206, Transcript of charged multivesicular body protein 3, humanhuman

TSL 2

Gene CHMP3, Length 436 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-206ENST00000466032 JCHAINP01591 159 aa6.1□□□□□ -1.43
CHMP3-206ENST00000466032 FCARP24071 287 aa6.1□□□□□ -1.43
CHMP3-206ENST00000466032 PHBP35232 272 aa6.1□□□□□ -1.43
CHMP3-206ENST00000466032 TNFRSF4P43489 277 aa6.1□□□□□ -1.43
CHMP3-206ENST00000466032 RECQLP46063 649 aaPredicted RBP6.1□□□□□ -1.43
CHMP3-206ENST00000466032 RPL21P46778 160 aaKnown RBP6.1□□□□□ -1.43
CHMP3-206ENST00000466032 NPY2RP49146 381 aa6.1□□□□□ -1.43
CHMP3-206ENST00000466032 DGKGP49619 791 aa6.1□□□□□ -1.43
CHMP3-206ENST00000466032 ITGA8P53708 1063 aa6.1□□□□□ -1.43
CHMP3-206ENST00000466032 PLTPP55058 493 aa6.1□□□□□ -1.43
CHMP3-206ENST00000466032 EIF3BP55884 814 aaKnown RBP6.1□□□□□ -1.43
CHMP3-206ENST00000466032 RPL26P61254 145 aaKnown RBP6.1□□□□□ -1.43
CHMP3-206ENST00000466032 IRX1P78414 480 aaPredicted RBP6.1□□□□□ -1.43
CHMP3-206ENST00000466032 ECT2LQ008S8 904 aa6.1□□□□□ -1.43
CHMP3-206ENST00000466032 PDE1BQ01064 536 aa6.1□□□□□ -1.43
CHMP3-206ENST00000466032 SLC7A5Q01650 507 aa6.1□□□□□ -1.43
CHMP3-206ENST00000466032 WASHC5Q12768 1159 aa6.1□□□□□ -1.43
CHMP3-206ENST00000466032 CDH17Q12864 832 aa6.1□□□□□ -1.43
CHMP3-206ENST00000466032 SFSWAPQ12872 951 aaKnown RBP6.1□□□□□ -1.43
CHMP3-206ENST00000466032 SETDB1Q15047 1291 aa6.1□□□□□ -1.43
CHMP3-206ENST00000466032 SKIV2LQ15477 1246 aaKnown RBP6.1□□□□□ -1.43
CHMP3-206ENST00000466032 HIF1AQ16665 826 aa6.1□□□□□ -1.43
CHMP3-206ENST00000466032 TTC31Q49AM3 519 aaPredicted RBP6.1□□□□□ -1.43
CHMP3-206ENST00000466032 HSF5Q4G112 596 aaPredicted RBP6.1□□□□□ -1.43
CHMP3-206ENST00000466032 HABP4Q5JVS0 413 aaKnown RBP6.1□□□□□ -1.43
CHMP3-206ENST00000466032 LY6G5CQ5SRR4 150 aa6.1□□□□□ -1.43
CHMP3-206ENST00000466032 RNASEH2BQ5TBB1 312 aaKnown RBP6.1□□□□□ -1.43
CHMP3-206ENST00000466032 GRAMD4Q6IC98 578 aa6.1□□□□□ -1.43
CHMP3-206ENST00000466032 TANGO2Q6ICL3 276 aa6.1□□□□□ -1.43
CHMP3-206ENST00000466032 PTCRAQ6ISU1 281 aaPredicted RBP6.1□□□□□ -1.43
CHMP3-206ENST00000466032 ZNF449Q6P9G9 518 aa6.1□□□□□ -1.43
CHMP3-206ENST00000466032 TPGS1Q6ZTW0 290 aa6.1□□□□□ -1.43
CHMP3-206ENST00000466032 CYS1Q717R9 158 aa6.1□□□□□ -1.43
CHMP3-206ENST00000466032 NLRP9Q7RTR0 991 aa6.1□□□□□ -1.43
CHMP3-206ENST00000466032 TRMT11Q7Z4G4 463 aaKnown RBP6.1□□□□□ -1.43
CHMP3-206ENST00000466032 TMEM25Q86YD3 366 aa6.1□□□□□ -1.43
CHMP3-206ENST00000466032 ZNF567Q8N184 647 aa6.1□□□□□ -1.43
CHMP3-206ENST00000466032 CFAP52Q8N1V2 620 aa6.1□□□□□ -1.43
CHMP3-206ENST00000466032 MREGQ8N565 214 aa6.1□□□□□ -1.43
CHMP3-206ENST00000466032 DEFB123Q8N688 67 aa6.1□□□□□ -1.43
CHMP3-206ENST00000466032 OTUD6BQ8N6M0 293 aa6.1□□□□□ -1.43
CHMP3-206ENST00000466032 NAT8LQ8N9F0 302 aa6.1□□□□□ -1.43
CHMP3-206ENST00000466032 HCAR2Q8TDS4 363 aa6.1□□□□□ -1.43
CHMP3-206ENST00000466032 IFT81Q8WYA0 676 aa6.1□□□□□ -1.43
CHMP3-206ENST00000466032 PEX13Q92968 403 aa6.1□□□□□ -1.43
CHMP3-206ENST00000466032 ITFG2Q969R8 447 aa6.1□□□□□ -1.43
CHMP3-206ENST00000466032 CELF6Q96J87 481 aaKnown RBP6.1□□□□□ -1.43
CHMP3-206ENST00000466032 NUDCD1Q96RS6 583 aa6.1□□□□□ -1.43
CHMP3-206ENST00000466032 TUBGCP5Q96RT8 1024 aa6.1□□□□□ -1.43
CHMP3-206ENST00000466032 MYADMQ96S97 322 aa6.1□□□□□ -1.43
CHMP3-206ENST00000466032 CDX2Q99626 313 aaPredicted RBP6.1□□□□□ -1.43
CHMP3-206ENST00000466032 MGME1Q9BQP7 344 aa6.1□□□□□ -1.43
CHMP3-206ENST00000466032 CCDC77Q9BR77 488 aa6.1□□□□□ -1.43
CHMP3-206ENST00000466032 SPON2Q9BUD6 331 aa6.1□□□□□ -1.43
CHMP3-206ENST00000466032 FSD1LQ9BXM9 530 aa6.1□□□□□ -1.43
CHMP3-206ENST00000466032 ADGRE3Q9BY15 652 aa6.1□□□□□ -1.43
CHMP3-206ENST00000466032 MAGEB5Q9BZ81 275 aa6.1□□□□□ -1.43
CHMP3-206ENST00000466032 POMKQ9H5K3 350 aa6.1□□□□□ -1.43
CHMP3-206ENST00000466032 CXorf56Q9H5V9 222 aa6.1□□□□□ -1.43
CHMP3-206ENST00000466032 NOL6Q9H6R4 1146 aaKnown RBP6.1□□□□□ -1.43
CHMP3-206ENST00000466032 BRD9Q9H8M2 597 aa6.1□□□□□ -1.43
CHMP3-206ENST00000466032 FBRSQ9HAH7 460 aa6.1□□□□□ -1.43
CHMP3-206ENST00000466032 PDFQ9HBH1 243 aa6.1□□□□□ -1.43
CHMP3-206ENST00000466032 ARNT2Q9HBZ2 717 aa6.1□□□□□ -1.43
CHMP3-206ENST00000466032 GLOD4Q9HC38 313 aa6.1□□□□□ -1.43
CHMP3-206ENST00000466032 BFARQ9NZS9 450 aa6.1□□□□□ -1.43
CHMP3-206ENST00000466032 SEPT10Q9P0V9 454 aa6.1□□□□□ -1.43
CHMP3-206ENST00000466032 GGA2Q9UJY4 613 aa6.1□□□□□ -1.43
CHMP3-206ENST00000466032 RPL26L1Q9UNX3 145 aaKnown RBP6.1□□□□□ -1.43
CHMP3-206ENST00000466032 SNX24Q9Y343 169 aa6.1□□□□□ -1.43
CHMP3-206ENST00000466032 OR51B4Q9Y5P0 310 aa6.1□□□□□ -1.43
CHMP3-206ENST00000466032 SNX10Q9Y5X0 201 aa6.1□□□□□ -1.43
CHMP3-206ENST00000466032 TRANK1O15050 2925 aa6.09□□□□□ -1.43
CHMP3-206ENST00000466032 ATG2AQ2TAZ0 1938 aa6.09□□□□□ -1.43
CHMP3-206ENST00000466032 PRRC2BQ5JSZ5 2229 aaKnown RBP6.09□□□□□ -1.43
CHMP3-206ENST00000466032 A0A0D9SEW6 157 aa6.09□□□□□ -1.43
CHMP3-206ENST00000466032 CCDC189A1A4V9 331 aa6.09□□□□□ -1.43
CHMP3-206ENST00000466032 E7ESA3 106 aa6.09□□□□□ -1.43
CHMP3-206ENST00000466032 KCNK1O00180 336 aa6.09□□□□□ -1.43
CHMP3-206ENST00000466032 TRDMT1O14717 391 aaKnown RBP6.09□□□□□ -1.43
CHMP3-206ENST00000466032 ALOX15BO15296 676 aa6.09□□□□□ -1.43
CHMP3-206ENST00000466032 INSIG1O15503 277 aa6.09□□□□□ -1.43
CHMP3-206ENST00000466032 ATP9BO43861 1147 aa6.09□□□□□ -1.43
CHMP3-206ENST00000466032 SOCS5O75159 536 aa6.09□□□□□ -1.43
CHMP3-206ENST00000466032 ZMPSTE24O75844 475 aa6.09□□□□□ -1.43
CHMP3-206ENST00000466032 POP4O95707 220 aaKnown RBP6.09□□□□□ -1.43
CHMP3-206ENST00000466032 IGSF6O95976 241 aa6.09□□□□□ -1.43
CHMP3-206ENST00000466032 PEX11BO96011 259 aa6.09□□□□□ -1.43
CHMP3-206ENST00000466032 APODP05090 189 aa6.09□□□□□ -1.43
CHMP3-206ENST00000466032 CYP17A1P05093 508 aa6.09□□□□□ -1.43
CHMP3-206ENST00000466032 FGF1P05230 155 aa6.09□□□□□ -1.43
CHMP3-206ENST00000466032 APRTP07741 180 aa6.09□□□□□ -1.43
CHMP3-206ENST00000466032 DLDP09622 509 aaKnown RBP6.09□□□□□ -1.43
CHMP3-206ENST00000466032 VAV1P15498 845 aa6.09□□□□□ -1.43
CHMP3-206ENST00000466032 HLA-DPA1P20036 260 aa6.09□□□□□ -1.43
CHMP3-206ENST00000466032 KCNA5P22460 613 aa6.09□□□□□ -1.43
CHMP3-206ENST00000466032 GDI1P31150 447 aa6.09□□□□□ -1.43
CHMP3-206ENST00000466032 CSKP41240 450 aa6.09□□□□□ -1.43
CHMP3-206ENST00000466032 VIPR2P41587 438 aa6.09□□□□□ -1.43
CHMP3-206ENST00000466032 GRIA2P42262 883 aa6.09□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms