RNA–Protein interactions for RNA: ENST00000464628.1

SCAF8-205, Transcript of SR-related CTD associated factor 8, humanhuman

TSL 5

Gene SCAF8, Length 468 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF8-205ENST00000464628 CCDC65Q8IXS2 484 aa11.55□□□□□ -0.56
SCAF8-205ENST00000464628 DQX1Q8TE96 717 aaKnown RBP11.55□□□□□ -0.56
SCAF8-205ENST00000464628 KCTD13Q8WZ19 329 aa11.55□□□□□ -0.56
SCAF8-205ENST00000464628 TSACCQ96A04 125 aaPredicted RBP11.55□□□□□ -0.56
SCAF8-205ENST00000464628 RTP4Q96DX8 246 aa11.55□□□□□ -0.56
SCAF8-205ENST00000464628 PPP1R16AQ96I34 528 aa11.55□□□□□ -0.56
SCAF8-205ENST00000464628 IPO9Q96P70 1041 aaKnown RBP11.55□□□□□ -0.56
SCAF8-205ENST00000464628 FEM1AQ9BSK4 669 aa11.55□□□□□ -0.56
SCAF8-205ENST00000464628 TRIM55Q9BYV6 548 aa11.55□□□□□ -0.56
SCAF8-205ENST00000464628 BACH2Q9BYV9 841 aa11.55□□□□□ -0.56
SCAF8-205ENST00000464628 ASPSCR1Q9BZE9 553 aa11.55□□□□□ -0.56
SCAF8-205ENST00000464628 NIF3L1Q9GZT8 377 aa11.55□□□□□ -0.56
SCAF8-205ENST00000464628 CNGB3Q9NQW8 809 aa11.55□□□□□ -0.56
SCAF8-205ENST00000464628 SLC39A1Q9NY26 324 aa11.55□□□□□ -0.56
SCAF8-205ENST00000464628 CCDC39Q9UFE4 941 aa11.55□□□□□ -0.56
SCAF8-205ENST00000464628 IL36AQ9UHA7 158 aa11.55□□□□□ -0.56
SCAF8-205ENST00000464628 TSPAN16Q9UKR8 245 aa11.55□□□□□ -0.56
SCAF8-205ENST00000464628 TLR6Q9Y2C9 796 aa11.55□□□□□ -0.56
SCAF8-205ENST00000464628 ANKHD1Q8IWZ3 2542 aaKnown RBP11.55□□□□□ -0.56
SCAF8-205ENST00000464628 TCAF2A6NFQ2 919 aa11.54□□□□□ -0.56
SCAF8-205ENST00000464628 B4E171 279 aa11.54□□□□□ -0.56
SCAF8-205ENST00000464628 K7ERQ8 282 aa11.54□□□□□ -0.56
SCAF8-205ENST00000464628 SPTLC2O15270 562 aa11.54□□□□□ -0.56
SCAF8-205ENST00000464628 SMAD6O43541 496 aaKnown RBP11.54□□□□□ -0.56
SCAF8-205ENST00000464628 NUDT21O43809 227 aaKnown RBP11.54□□□□□ -0.56
SCAF8-205ENST00000464628 EXOC3O60645 756 aa11.54□□□□□ -0.56
SCAF8-205ENST00000464628 CBX6O95503 412 aa11.54□□□□□ -0.56
SCAF8-205ENST00000464628 FYNP06241 537 aa11.54□□□□□ -0.56
SCAF8-205ENST00000464628 THRAP10827 490 aa11.54□□□□□ -0.56
SCAF8-205ENST00000464628 CTSEP14091 401 aa11.54□□□□□ -0.56
SCAF8-205ENST00000464628 TSPAN7P41732 249 aa11.54□□□□□ -0.56
SCAF8-205ENST00000464628 STAT5AP42229 794 aa11.54□□□□□ -0.56
SCAF8-205ENST00000464628 LIMK2P53671 638 aa11.54□□□□□ -0.56
SCAF8-205ENST00000464628 RAD23BP54727 409 aa11.54□□□□□ -0.56
SCAF8-205ENST00000464628 SGCGQ13326 291 aa11.54□□□□□ -0.56
SCAF8-205ENST00000464628 TRA2AQ13595 282 aaKnown RBP eCLIP11.54□□□□□ -0.56
SCAF8-205ENST00000464628 NR1D2Q14995 579 aa11.54□□□□□ -0.56
SCAF8-205ENST00000464628 NR6A1Q15406 480 aa11.54□□□□□ -0.56
SCAF8-205ENST00000464628 GOLGA7BQ2TAP0 167 aa11.54□□□□□ -0.56
SCAF8-205ENST00000464628 ZRANB3Q5FWF4 1079 aa11.54□□□□□ -0.56
SCAF8-205ENST00000464628 DCAF12Q5T6F0 453 aa11.54□□□□□ -0.56
SCAF8-205ENST00000464628 SP5Q6BEB4 398 aaPredicted RBP11.54□□□□□ -0.56
SCAF8-205ENST00000464628 ZNF438Q7Z4V0 828 aa11.54□□□□□ -0.56
SCAF8-205ENST00000464628 HID1Q8IV36 788 aa11.54□□□□□ -0.56
SCAF8-205ENST00000464628 SIX6OS1Q8N1H7 587 aa11.54□□□□□ -0.56
SCAF8-205ENST00000464628 AGBL5Q8NDL9 886 aa11.54□□□□□ -0.56
SCAF8-205ENST00000464628 CCDC112Q8NEF3 446 aa11.54□□□□□ -0.56
SCAF8-205ENST00000464628 RNF34Q969K3 372 aa11.54□□□□□ -0.56
SCAF8-205ENST00000464628 CCDC114Q96M63 670 aa11.54□□□□□ -0.56
SCAF8-205ENST00000464628 SERPINB11Q96P15 392 aa11.54□□□□□ -0.56
SCAF8-205ENST00000464628 RBM15Q96T37 977 aaKnown RBP eCLIP11.54□□□□□ -0.56
SCAF8-205ENST00000464628 PRMT1Q99873 361 aaKnown RBP11.54□□□□□ -0.56
SCAF8-205ENST00000464628 MBNL1Q9NR56 388 aaKnown RBP11.54□□□□□ -0.56
SCAF8-205ENST00000464628 LIMCH1Q9UPQ0 1083 aa11.54□□□□□ -0.56
SCAF8-205ENST00000464628 POLHQ9Y253 713 aa11.54□□□□□ -0.56
SCAF8-205ENST00000464628 ITM2BQ9Y287 266 aa11.54□□□□□ -0.56
SCAF8-205ENST00000464628 TMEM184BQ9Y519 407 aaPredicted RBP11.54□□□□□ -0.56
SCAF8-205ENST00000464628 ZNF821O75541 412 aaPredicted RBP11.53□□□□□ -0.56
SCAF8-205ENST00000464628 RASGRP1O95267 797 aa11.53□□□□□ -0.56
SCAF8-205ENST00000464628 DLGAP3O95886 979 aa11.53□□□□□ -0.56
SCAF8-205ENST00000464628 L1CAMP32004 1257 aa11.53□□□□□ -0.56
SCAF8-205ENST00000464628 IRAK1P51617 712 aa11.53□□□□□ -0.56
SCAF8-205ENST00000464628 OR1D5P58170 312 aa11.53□□□□□ -0.56
SCAF8-205ENST00000464628 RAB15P59190 212 aa11.53□□□□□ -0.56
SCAF8-205ENST00000464628 BST2Q10589 180 aaKnown RBP11.53□□□□□ -0.56
SCAF8-205ENST00000464628 ARHGEF7Q14155 803 aa11.53□□□□□ -0.56
SCAF8-205ENST00000464628 CLPPQ16740 277 aaPredicted RBP11.53□□□□□ -0.56
SCAF8-205ENST00000464628 EDRF1Q3B7T1 1238 aa11.53□□□□□ -0.56
SCAF8-205ENST00000464628 LINGO4Q6UY18 593 aa11.53□□□□□ -0.56
SCAF8-205ENST00000464628 VPS36Q86VN1 386 aa11.53□□□□□ -0.56
SCAF8-205ENST00000464628 APLFQ8IW19 511 aaPredicted RBP11.53□□□□□ -0.56
SCAF8-205ENST00000464628 TP53I13Q8NBR0 393 aaPredicted RBP11.53□□□□□ -0.56
SCAF8-205ENST00000464628 CLEC4CQ8WTT0 213 aa11.53□□□□□ -0.56
SCAF8-205ENST00000464628 TEFMQ96QE5 360 aaKnown RBP11.53□□□□□ -0.56
SCAF8-205ENST00000464628 PSMB7Q99436 277 aa11.53□□□□□ -0.56
SCAF8-205ENST00000464628 MLXIPLQ9NP71 852 aa11.53□□□□□ -0.56
SCAF8-205ENST00000464628 RCOR3Q9P2K3 495 aaPredicted RBP11.53□□□□□ -0.56
SCAF8-205ENST00000464628 TFIP11Q9UBB9 837 aaKnown RBP11.53□□□□□ -0.56
SCAF8-205ENST00000464628 HEATR9A2RTY3 570 aa11.52□□□□□ -0.57
SCAF8-205ENST00000464628 TOR1BO14657 336 aa11.52□□□□□ -0.57
SCAF8-205ENST00000464628 TSPAN6O43657 245 aa11.52□□□□□ -0.57
SCAF8-205ENST00000464628 LTFP02788 710 aa11.52□□□□□ -0.57
SCAF8-205ENST00000464628 LCP1P13796 627 aa11.52□□□□□ -0.57
SCAF8-205ENST00000464628 RRM1P23921 792 aa11.52□□□□□ -0.57
SCAF8-205ENST00000464628 CD1CP29017 333 aa11.52□□□□□ -0.57
SCAF8-205ENST00000464628 CSF2RBP32927 897 aa11.52□□□□□ -0.57
SCAF8-205ENST00000464628 SLC8A3P57103 927 aa11.52□□□□□ -0.57
SCAF8-205ENST00000464628 CENPCQ03188 943 aa11.52□□□□□ -0.57
SCAF8-205ENST00000464628 DPYDQ12882 1025 aa11.52□□□□□ -0.57
SCAF8-205ENST00000464628 AMZ1Q400G9 498 aa11.52□□□□□ -0.57
SCAF8-205ENST00000464628 PAPD7Q5XG87 772 aaKnown RBP11.52□□□□□ -0.57
SCAF8-205ENST00000464628 CEP135Q66GS9 1140 aa11.52□□□□□ -0.57
SCAF8-205ENST00000464628 C22orf39Q6P5X5 142 aa11.52□□□□□ -0.57
SCAF8-205ENST00000464628 DPY19L3Q6ZPD9 716 aa11.52□□□□□ -0.57
SCAF8-205ENST00000464628 TAC4Q86UU9 113 aa11.52□□□□□ -0.57
SCAF8-205ENST00000464628 TAS1R2Q8TE23 839 aa11.52□□□□□ -0.57
SCAF8-205ENST00000464628 IRGQQ8WZA9 623 aa11.52□□□□□ -0.57
SCAF8-205ENST00000464628 C19orf60Q96EN9 201 aa11.52□□□□□ -0.57
SCAF8-205ENST00000464628 PDXPQ96GD0 296 aa11.52□□□□□ -0.57
SCAF8-205ENST00000464628 TNKS2Q9H2K2 1166 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms