RNA–Protein interactions for RNA: ENST00000464187.1

COL5A1-205, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 2

Gene COL5A1, Length 1,830 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-205ENST00000464187 PSAT1Q9Y617 370 aa14.73□□□□□ -0.05
COL5A1-205ENST00000464187 NUMBLQ9Y6R0 609 aa14.73□□□□□ -0.05
COL5A1-205ENST00000464187 LEFTY2O00292 366 aa14.72□□□□□ -0.05
COL5A1-205ENST00000464187 TSPAN3O60637 253 aa14.72□□□□□ -0.05
COL5A1-205ENST00000464187 MAFKO60675 156 aa14.72□□□□□ -0.05
COL5A1-205ENST00000464187 KRT16P08779 473 aa14.72□□□□□ -0.05
COL5A1-205ENST00000464187 NFKB1P19838 968 aa14.72□□□□□ -0.05
COL5A1-205ENST00000464187 CCNCP24863 283 aa14.72□□□□□ -0.05
COL5A1-205ENST00000464187 MAPKAPK2P49137 400 aa14.72□□□□□ -0.05
COL5A1-205ENST00000464187 PAPOLAP51003 745 aaKnown RBP14.72□□□□□ -0.05
COL5A1-205ENST00000464187 CDH4P55283 916 aa14.72□□□□□ -0.05
COL5A1-205ENST00000464187 SMAD1Q15797 465 aaKnown RBP14.72□□□□□ -0.05
COL5A1-205ENST00000464187 SNCBQ16143 134 aa14.72□□□□□ -0.05
COL5A1-205ENST00000464187 SPANXN3Q5MJ09 141 aa14.72□□□□□ -0.05
COL5A1-205ENST00000464187 HTR3DQ70Z44 454 aa14.72□□□□□ -0.05
COL5A1-205ENST00000464187 FCRL3Q96P31 734 aaPredicted RBP14.72□□□□□ -0.05
COL5A1-205ENST00000464187 TSGA13Q96PP4 275 aa14.72□□□□□ -0.05
COL5A1-205ENST00000464187 PRO3102Q9H379 93 aa14.72□□□□□ -0.05
COL5A1-205ENST00000464187 IL1RAPL1Q9NZN1 696 aa14.72□□□□□ -0.05
COL5A1-205ENST00000464187 SIRPGQ9P1W8 387 aa14.72□□□□□ -0.05
COL5A1-205ENST00000464187 TRHDEQ9UKU6 1024 aa14.72□□□□□ -0.05
COL5A1-205ENST00000464187 MRPS23Q9Y3D9 190 aaKnown RBP14.72□□□□□ -0.05
COL5A1-205ENST00000464187 REV3LO60673 3130 aa14.72□□□□□ -0.05
COL5A1-205ENST00000464187 MIA3Q5JRA6 1907 aa14.72□□□□□ -0.05
COL5A1-205ENST00000464187 SOBPA7XYQ1 873 aa14.71□□□□□ -0.05
COL5A1-205ENST00000464187 RAMP2O60895 175 aa14.71□□□□□ -0.05
COL5A1-205ENST00000464187 PAPLNO95428 1278 aa14.71□□□□□ -0.05
COL5A1-205ENST00000464187 TGDSO95455 350 aa14.71□□□□□ -0.05
COL5A1-205ENST00000464187 ATP6V1G2O95670 118 aa14.71□□□□□ -0.05
COL5A1-205ENST00000464187 ALDOAP04075 364 aaKnown RBP14.71□□□□□ -0.05
COL5A1-205ENST00000464187 POLBP06746 335 aa14.71□□□□□ -0.05
COL5A1-205ENST00000464187 CBX2Q14781 532 aaPredicted RBP14.71□□□□□ -0.05
COL5A1-205ENST00000464187 TEX44Q53QW1 395 aa14.71□□□□□ -0.05
COL5A1-205ENST00000464187 CES4AQ5XG92 561 aa14.71□□□□□ -0.05
COL5A1-205ENST00000464187 ITPRIPL1Q6GPH6 555 aa14.71□□□□□ -0.05
COL5A1-205ENST00000464187 LRRC49Q8IUZ0 686 aa14.71□□□□□ -0.05
COL5A1-205ENST00000464187 BBS7Q8IWZ6 715 aa14.71□□□□□ -0.05
COL5A1-205ENST00000464187 ZSCAN18Q8TBC5 510 aaPredicted RBP14.71□□□□□ -0.05
COL5A1-205ENST00000464187 SH3RF2Q8TEC5 729 aa14.71□□□□□ -0.05
COL5A1-205ENST00000464187 ING5Q8WYH8 240 aa14.71□□□□□ -0.05
COL5A1-205ENST00000464187 HMCESQ96FZ2 354 aa14.71□□□□□ -0.05
COL5A1-205ENST00000464187 CERS2Q96G23 380 aa14.71□□□□□ -0.05
COL5A1-205ENST00000464187 ZNF576Q9H609 170 aa14.71□□□□□ -0.05
COL5A1-205ENST00000464187 NSUN3Q9H649 340 aaKnown RBP14.71□□□□□ -0.05
COL5A1-205ENST00000464187 RETREG1Q9H6L5 497 aa14.71□□□□□ -0.05
COL5A1-205ENST00000464187 KCNK13Q9HB14 408 aa14.71□□□□□ -0.05
COL5A1-205ENST00000464187 IPO11Q9UI26 975 aaKnown RBP14.71□□□□□ -0.05
COL5A1-205ENST00000464187 ZNF510Q9Y2H8 683 aa14.71□□□□□ -0.05
COL5A1-205ENST00000464187 RPS6KL1Q9Y6S9 549 aa14.71□□□□□ -0.05
COL5A1-205ENST00000464187 PDE4DIPQ5VU43 2346 aa14.71□□□□□ -0.05
COL5A1-205ENST00000464187 MYO9BQ13459 2157 aa14.71□□□□□ -0.06
COL5A1-205ENST00000464187 A0A0G2JND7 137 aa14.71□□□□□ -0.06
COL5A1-205ENST00000464187 A0A1B0GVM2 712 aa14.71□□□□□ -0.06
COL5A1-205ENST00000464187 TCAF2A6NFQ2 919 aa14.71□□□□□ -0.06
COL5A1-205ENST00000464187 ARHGAP42A6NI28 874 aa14.71□□□□□ -0.06
COL5A1-205ENST00000464187 ERI2A8K979 691 aaKnown RBP14.71□□□□□ -0.06
COL5A1-205ENST00000464187 TPP1O14773 563 aa14.71□□□□□ -0.06
COL5A1-205ENST00000464187 CLDN11O75508 207 aa14.71□□□□□ -0.06
COL5A1-205ENST00000464187 GLP2RO95838 553 aa14.71□□□□□ -0.06
COL5A1-205ENST00000464187 ERVK-10P10266 1014 aa14.71□□□□□ -0.06
COL5A1-205ENST00000464187 CEBPBP17676 345 aa14.71□□□□□ -0.06
COL5A1-205ENST00000464187 TARSP26639 723 aaKnown RBP14.71□□□□□ -0.06
COL5A1-205ENST00000464187 POLD3Q15054 466 aaPredicted RBP14.71□□□□□ -0.06
COL5A1-205ENST00000464187 TCEAL5Q5H9L2 206 aa14.71□□□□□ -0.06
COL5A1-205ENST00000464187 SPDYAQ5MJ70 313 aa14.71□□□□□ -0.06
COL5A1-205ENST00000464187 ZNF449Q6P9G9 518 aa14.71□□□□□ -0.06
COL5A1-205ENST00000464187 TRIM42Q8IWZ5 723 aa14.71□□□□□ -0.06
COL5A1-205ENST00000464187 FAM217AQ8IXS0 508 aa14.71□□□□□ -0.06
COL5A1-205ENST00000464187 ITFG1Q8TB96 612 aa14.71□□□□□ -0.06
COL5A1-205ENST00000464187 ACMSDQ8TDX5 336 aa14.71□□□□□ -0.06
COL5A1-205ENST00000464187 USP13Q92995 863 aaPredicted RBP14.71□□□□□ -0.06
COL5A1-205ENST00000464187 TEKT5Q96M29 485 aa14.71□□□□□ -0.06
COL5A1-205ENST00000464187 ZSWIM3Q96MP5 696 aa14.71□□□□□ -0.06
COL5A1-205ENST00000464187 VAT1Q99536 393 aa14.71□□□□□ -0.06
COL5A1-205ENST00000464187 LRRC40Q9H9A6 602 aa14.71□□□□□ -0.06
COL5A1-205ENST00000464187 TDP1Q9NUW8 608 aa14.71□□□□□ -0.06
COL5A1-205ENST00000464187 DZANK1Q9NVP4 752 aa14.71□□□□□ -0.06
COL5A1-205ENST00000464187 ZFP69BQ9UJL9 534 aa14.71□□□□□ -0.06
COL5A1-205ENST00000464187 ATG2AQ2TAZ0 1938 aa14.7□□□□□ -0.06
COL5A1-205ENST00000464187 MATN3O15232 486 aa14.7□□□□□ -0.06
COL5A1-205ENST00000464187 ATP5HO75947 161 aa14.7□□□□□ -0.06
COL5A1-205ENST00000464187 BPGMP07738 259 aa14.7□□□□□ -0.06
COL5A1-205ENST00000464187 DLDP09622 509 aaKnown RBP14.7□□□□□ -0.06
COL5A1-205ENST00000464187 T-ENOLP0DO92 83 aa14.7□□□□□ -0.06
COL5A1-205ENST00000464187 YBEYP58557 167 aaPredicted RBP14.7□□□□□ -0.06
COL5A1-205ENST00000464187 BST1Q10588 318 aa14.7□□□□□ -0.06
COL5A1-205ENST00000464187 HYAL1Q12794 435 aa14.7□□□□□ -0.06
COL5A1-205ENST00000464187 CHI3L2Q15782 390 aa14.7□□□□□ -0.06
COL5A1-205ENST00000464187 PARP15Q460N3 678 aa14.7□□□□□ -0.06
COL5A1-205ENST00000464187 TAF1BQ53T94 588 aaPredicted RBP14.7□□□□□ -0.06
COL5A1-205ENST00000464187 TIGD7Q6NT04 549 aaPredicted RBP14.7□□□□□ -0.06
COL5A1-205ENST00000464187 POTEHQ6S545 545 aa14.7□□□□□ -0.06
COL5A1-205ENST00000464187 CHST9Q7L1S5 443 aa14.7□□□□□ -0.06
COL5A1-205ENST00000464187 MTDHQ86UE4 582 aaKnown RBP14.7□□□□□ -0.06
COL5A1-205ENST00000464187 ZNF354CQ86Y25 554 aa14.7□□□□□ -0.06
COL5A1-205ENST00000464187 RIN3Q8TB24 985 aa14.7□□□□□ -0.06
COL5A1-205ENST00000464187 E2F7Q96AV8 911 aa14.7□□□□□ -0.06
COL5A1-205ENST00000464187 ZNF669Q96BR6 464 aaPredicted RBP14.7□□□□□ -0.06
COL5A1-205ENST00000464187 TMA16Q96EY4 203 aaKnown RBP14.7□□□□□ -0.06
COL5A1-205ENST00000464187 TMEM120AQ9BXJ8 343 aa14.7□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms