RNA–Protein interactions for RNA: ENST00000456367.5

PCDH9-203, Transcript of protocadherin 9, humanhuman

TSL 1 (best) BASIC

Gene PCDH9, Length 5,072 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-203ENST00000456367 MROH2AA6NES4 1674 aa5.05□□□□□ -1.6
PCDH9-203ENST00000456367 PCP4L1A6NKN8 68 aa5.04□□□□□ -1.6
PCDH9-203ENST00000456367 H3BMM5 538 aa5.04□□□□□ -1.6
PCDH9-203ENST00000456367 UBXN8O00124 270 aa5.04□□□□□ -1.6
PCDH9-203ENST00000456367 DYRK3O43781 588 aa5.04□□□□□ -1.6
PCDH9-203ENST00000456367 NPHS1O60500 1241 aa5.04□□□□□ -1.6
PCDH9-203ENST00000456367 HMGCRP04035 888 aa5.04□□□□□ -1.6
PCDH9-203ENST00000456367 RPLP0P05388 317 aaKnown RBP5.04□□□□□ -1.6
PCDH9-203ENST00000456367 FYNP06241 537 aa5.04□□□□□ -1.6
PCDH9-203ENST00000456367 CYP3A4P08684 503 aa5.04□□□□□ -1.6
PCDH9-203ENST00000456367 CYP19A1P11511 503 aaPredicted RBP5.04□□□□□ -1.6
PCDH9-203ENST00000456367 PPIBP23284 216 aaKnown RBP5.04□□□□□ -1.6
PCDH9-203ENST00000456367 GLDCP23378 1020 aa5.04□□□□□ -1.6
PCDH9-203ENST00000456367 RXRBP28702 533 aa5.04□□□□□ -1.6
PCDH9-203ENST00000456367 ADORA2BP29275 332 aa5.04□□□□□ -1.6
PCDH9-203ENST00000456367 MIPP30301 263 aa5.04□□□□□ -1.6
PCDH9-203ENST00000456367 SSTR3P32745 418 aaPredicted RBP5.04□□□□□ -1.6
PCDH9-203ENST00000456367 AVPR1AP37288 418 aa5.04□□□□□ -1.6
PCDH9-203ENST00000456367 NPTX2P47972 431 aa5.04□□□□□ -1.6
PCDH9-203ENST00000456367 RHDQ02161 417 aa5.04□□□□□ -1.6
PCDH9-203ENST00000456367 SLC18A2Q05940 514 aa5.04□□□□□ -1.6
PCDH9-203ENST00000456367 PTPN11Q06124 597 aaPredicted RBP5.04□□□□□ -1.6
PCDH9-203ENST00000456367 FOXM1Q08050 763 aa5.04□□□□□ -1.6
PCDH9-203ENST00000456367 CNTN1Q12860 1018 aa5.04□□□□□ -1.6
PCDH9-203ENST00000456367 OGFRL1Q5TC84 451 aaPredicted RBP5.04□□□□□ -1.6
PCDH9-203ENST00000456367 BTBD8Q5XKL5 378 aa5.04□□□□□ -1.6
PCDH9-203ENST00000456367 TYW3Q6IPR3 259 aaKnown RBP5.04□□□□□ -1.6
PCDH9-203ENST00000456367 CATSPER4Q7RTX7 472 aa5.04□□□□□ -1.6
PCDH9-203ENST00000456367 FGD2Q7Z6J4 655 aa5.04□□□□□ -1.6
PCDH9-203ENST00000456367 RASAL3Q86YV0 1011 aa5.04□□□□□ -1.6
PCDH9-203ENST00000456367 LRTOMTQ8WZ04 291 aa5.04□□□□□ -1.6
PCDH9-203ENST00000456367 PIGBQ92521 554 aa5.04□□□□□ -1.6
PCDH9-203ENST00000456367 GPRASP2Q96D09 838 aa5.04□□□□□ -1.6
PCDH9-203ENST00000456367 KIF12Q96FN5 646 aa5.04□□□□□ -1.6
PCDH9-203ENST00000456367 NGLY1Q96IV0 654 aa5.04□□□□□ -1.6
PCDH9-203ENST00000456367 FAM84AQ96KN4 292 aa5.04□□□□□ -1.6
PCDH9-203ENST00000456367 MAGEB10Q96LZ2 347 aaPredicted RBP5.04□□□□□ -1.6
PCDH9-203ENST00000456367 PPP3R2Q96LZ3 170 aa5.04□□□□□ -1.6
PCDH9-203ENST00000456367 MED28Q9H204 178 aa5.04□□□□□ -1.6
PCDH9-203ENST00000456367 SLC6A15Q9H2J7 730 aa5.04□□□□□ -1.6
PCDH9-203ENST00000456367 PRDM8Q9NQV8 689 aa5.04□□□□□ -1.6
PCDH9-203ENST00000456367 SNX15Q9NRS6 342 aa5.04□□□□□ -1.6
PCDH9-203ENST00000456367 ZNF222Q9UK12 451 aa5.04□□□□□ -1.6
PCDH9-203ENST00000456367 ZNF232Q9UNY5 417 aa5.04□□□□□ -1.6
PCDH9-203ENST00000456367 SAMD4AQ9UPU9 718 aaKnown RBP5.04□□□□□ -1.6
PCDH9-203ENST00000456367 CLRN2A0PK11 232 aa5.04□□□□□ -1.6
PCDH9-203ENST00000456367 FAM92AA1XBS5 289 aa5.04□□□□□ -1.6
PCDH9-203ENST00000456367 H0YAE9 185 aa5.04□□□□□ -1.6
PCDH9-203ENST00000456367 BCKDKO14874 412 aa5.04□□□□□ -1.6
PCDH9-203ENST00000456367 PMM2O15305 246 aa5.04□□□□□ -1.6
PCDH9-203ENST00000456367 SSNA1O43805 119 aa5.04□□□□□ -1.6
PCDH9-203ENST00000456367 ABCB7O75027 752 aa5.04□□□□□ -1.6
PCDH9-203ENST00000456367 SLC2A3P11169 496 aa5.04□□□□□ -1.6
PCDH9-203ENST00000456367 PEPDP12955 493 aa5.04□□□□□ -1.6
PCDH9-203ENST00000456367 F8A1P23610 371 aa5.04□□□□□ -1.6
PCDH9-203ENST00000456367 EPHA3P29320 983 aa5.04□□□□□ -1.6
PCDH9-203ENST00000456367 RGS7P49802 495 aa5.04□□□□□ -1.6
PCDH9-203ENST00000456367 SEPHS1P49903 392 aa5.04□□□□□ -1.6
PCDH9-203ENST00000456367 LSM3P62310 102 aaKnown RBP5.04□□□□□ -1.6
PCDH9-203ENST00000456367 TSTA3Q13630 321 aaPredicted RBP5.04□□□□□ -1.6
PCDH9-203ENST00000456367 HNRNPDQ14103 355 aaKnown RBP5.04□□□□□ -1.6
PCDH9-203ENST00000456367 RFTN1Q14699 578 aaPredicted RBP5.04□□□□□ -1.6
PCDH9-203ENST00000456367 PCID2Q5JVF3 399 aa5.04□□□□□ -1.6
PCDH9-203ENST00000456367 TXNDC11Q6PKC3 985 aa5.04□□□□□ -1.6
PCDH9-203ENST00000456367 ARHGAP36Q6ZRI8 547 aa5.04□□□□□ -1.6
PCDH9-203ENST00000456367 ANKS3Q6ZW76 656 aa5.04□□□□□ -1.6
PCDH9-203ENST00000456367 ZNF767PQ75MW2 155 aa5.04□□□□□ -1.6
PCDH9-203ENST00000456367 DDX51Q8N8A6 666 aaKnown RBP eCLIP5.04□□□□□ -1.6
PCDH9-203ENST00000456367 TMEM176AQ96HP8 235 aa5.04□□□□□ -1.6
PCDH9-203ENST00000456367 FOPNLQ96NB1 174 aa5.04□□□□□ -1.6
PCDH9-203ENST00000456367 ERMAPQ96PL5 475 aaPredicted RBP5.04□□□□□ -1.6
PCDH9-203ENST00000456367 RNF157Q96PX1 679 aa5.04□□□□□ -1.6
PCDH9-203ENST00000456367 TDRD1Q9BXT4 1180 aaKnown RBP5.04□□□□□ -1.6
PCDH9-203ENST00000456367 TOR4AQ9NXH8 423 aa5.04□□□□□ -1.6
PCDH9-203ENST00000456367 C10orf71Q711Q0 1435 aa5.04□□□□□ -1.6
PCDH9-203ENST00000456367 CASZ1Q86V15 1759 aa5.04□□□□□ -1.6
PCDH9-203ENST00000456367 FAM95CA0A1B0GW59 222 aa5.04□□□□□ -1.6
PCDH9-203ENST00000456367 BOLA2-SMG1P6H3BVE0 249 aa5.04□□□□□ -1.6
PCDH9-203ENST00000456367 TSPAN4O14817 238 aa5.04□□□□□ -1.6
PCDH9-203ENST00000456367 FANCGO15287 622 aa5.04□□□□□ -1.6
PCDH9-203ENST00000456367 SCELO95171 688 aa5.04□□□□□ -1.6
PCDH9-203ENST00000456367 GLP2RO95838 553 aa5.04□□□□□ -1.6
PCDH9-203ENST00000456367 GUCA1CO95843 209 aa5.04□□□□□ -1.6
PCDH9-203ENST00000456367 NDUFB10O96000 172 aa5.04□□□□□ -1.6
PCDH9-203ENST00000456367 SERPINF2P08697 491 aa5.04□□□□□ -1.6
PCDH9-203ENST00000456367 NAT1P18440 290 aa5.04□□□□□ -1.6
PCDH9-203ENST00000456367 ACO1P21399 889 aaKnown RBP5.04□□□□□ -1.6
PCDH9-203ENST00000456367 SOX11P35716 441 aa5.04□□□□□ -1.6
PCDH9-203ENST00000456367 MAPK12P53778 367 aa5.04□□□□□ -1.6
PCDH9-203ENST00000456367 RAB10P61026 200 aa5.04□□□□□ -1.6
PCDH9-203ENST00000456367 HSF2Q03933 536 aa5.04□□□□□ -1.6
PCDH9-203ENST00000456367 SMAD1Q15797 465 aaKnown RBP5.04□□□□□ -1.6
PCDH9-203ENST00000456367 MYLK3Q32MK0 819 aa5.04□□□□□ -1.6
PCDH9-203ENST00000456367 TBC1D25Q3MII6 688 aa5.04□□□□□ -1.6
PCDH9-203ENST00000456367 SPDYE7PQ495Y7 208 aa5.04□□□□□ -1.6
PCDH9-203ENST00000456367 RALGPS1Q5JS13 557 aa5.04□□□□□ -1.6
PCDH9-203ENST00000456367 PTRHD1Q6GMV3 140 aaKnown RBP5.04□□□□□ -1.6
PCDH9-203ENST00000456367 PMF1Q6P1K2 205 aa5.04□□□□□ -1.6
PCDH9-203ENST00000456367 FAM131AQ6UXB0 335 aa5.04□□□□□ -1.6
PCDH9-203ENST00000456367 MAP4K3Q8IVH8 894 aa5.04□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms