RNA–Protein interactions for RNA: ENST00000453453.1

SNX17-204, Transcript of sorting nexin 17, humanhuman

TSL 1 (best)

Gene SNX17, Length 1,638 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-204ENST00000453453 HTR3CQ8WXA8 447 aa16.1■□□□□ 0.17
SNX17-204ENST00000453453 FGF13Q92913 245 aa16.1■□□□□ 0.17
SNX17-204ENST00000453453 SMARCD2Q92925 531 aa16.1■□□□□ 0.17
SNX17-204ENST00000453453 FAM161BQ96MY7 647 aa16.1■□□□□ 0.17
SNX17-204ENST00000453453 LGMNQ99538 433 aa16.1■□□□□ 0.17
SNX17-204ENST00000453453 KLC2Q9H0B6 622 aa16.1■□□□□ 0.17
SNX17-204ENST00000453453 DENND2DQ9H6A0 471 aaPredicted RBP16.1■□□□□ 0.17
SNX17-204ENST00000453453 C10orf88Q9H8K7 445 aa16.1■□□□□ 0.17
SNX17-204ENST00000453453 PAPOLBQ9NRJ5 636 aaKnown RBP16.1■□□□□ 0.17
SNX17-204ENST00000453453 SCOCQ9UIL1 159 aa16.1■□□□□ 0.17
SNX17-204ENST00000453453 CDH7Q9ULB5 785 aa16.1■□□□□ 0.17
SNX17-204ENST00000453453 SMAPO00193 183 aa16.09■□□□□ 0.17
SNX17-204ENST00000453453 SOX1O00570 391 aaPredicted RBP16.09■□□□□ 0.17
SNX17-204ENST00000453453 TGDSO95455 350 aa16.09■□□□□ 0.17
SNX17-204ENST00000453453 GM2AP17900 193 aa16.09■□□□□ 0.17
SNX17-204ENST00000453453 SP100P23497 879 aaPredicted RBP16.09■□□□□ 0.17
SNX17-204ENST00000453453 ETFBP38117 255 aa16.09■□□□□ 0.17
SNX17-204ENST00000453453 PEX19P40855 299 aa16.09■□□□□ 0.17
SNX17-204ENST00000453453 VPS41P49754 854 aa16.09■□□□□ 0.17
SNX17-204ENST00000453453 TIGD7Q6NT04 549 aaPredicted RBP16.09■□□□□ 0.17
SNX17-204ENST00000453453 SETD3Q86TU7 594 aaPredicted RBP16.09■□□□□ 0.17
SNX17-204ENST00000453453 ARHGAP12Q8IWW6 846 aa16.09■□□□□ 0.17
SNX17-204ENST00000453453 NETO2Q8NC67 525 aa16.09■□□□□ 0.17
SNX17-204ENST00000453453 RTP4Q96DX8 246 aa16.09■□□□□ 0.17
SNX17-204ENST00000453453 MYEOVQ96EZ4 313 aa16.09■□□□□ 0.17
SNX17-204ENST00000453453 IFT43Q96FT9 208 aa16.09■□□□□ 0.17
SNX17-204ENST00000453453 NECTIN4Q96NY8 510 aa16.09■□□□□ 0.17
SNX17-204ENST00000453453 SLC39A8Q9C0K1 460 aa16.09■□□□□ 0.17
SNX17-204ENST00000453453 MAGEH1Q9H213 219 aa16.09■□□□□ 0.17
SNX17-204ENST00000453453 S1PR5Q9H228 398 aa16.09■□□□□ 0.17
SNX17-204ENST00000453453 NDFIP2Q9NV92 336 aa16.09■□□□□ 0.17
SNX17-204ENST00000453453 SEPT10Q9P0V9 454 aa16.09■□□□□ 0.17
SNX17-204ENST00000453453 PAK5Q9P286 719 aa16.09■□□□□ 0.17
SNX17-204ENST00000453453 PDP2Q9P2J9 529 aa16.09■□□□□ 0.17
SNX17-204ENST00000453453 ZNF212Q9UDV6 495 aa16.09■□□□□ 0.17
SNX17-204ENST00000453453 TBK1Q9UHD2 729 aa16.09■□□□□ 0.17
SNX17-204ENST00000453453 NYNRINQ9P2P1 1898 aaKnown RBP16.09■□□□□ 0.17
SNX17-204ENST00000453453 EME2A4GXA9 379 aaPredicted RBP16.08■□□□□ 0.17
SNX17-204ENST00000453453 H0Y626 953 aa16.08■□□□□ 0.17
SNX17-204ENST00000453453 ALOX15BO15296 676 aa16.08■□□□□ 0.17
SNX17-204ENST00000453453 SMIM24O75264 130 aa16.08■□□□□ 0.17
SNX17-204ENST00000453453 ATP5BP06576 529 aaKnown RBP16.08■□□□□ 0.17
SNX17-204ENST00000453453 RHOCP08134 193 aa16.08■□□□□ 0.17
SNX17-204ENST00000453453 CCNCP24863 283 aa16.08■□□□□ 0.17
SNX17-204ENST00000453453 GDF10P55107 478 aa16.08■□□□□ 0.17
SNX17-204ENST00000453453 SH3BGRP55822 239 aaPredicted RBP16.08■□□□□ 0.17
SNX17-204ENST00000453453 GPS1Q13098 491 aa16.08■□□□□ 0.17
SNX17-204ENST00000453453 ANO4Q32M45 955 aa16.08■□□□□ 0.17
SNX17-204ENST00000453453 P3H1Q32P28 736 aa16.08■□□□□ 0.17
SNX17-204ENST00000453453 FAM78AQ5JUQ0 283 aa16.08■□□□□ 0.17
SNX17-204ENST00000453453 MPP7Q5T2T1 576 aa16.08■□□□□ 0.17
SNX17-204ENST00000453453 TRIM68Q6AZZ1 485 aa16.08■□□□□ 0.17
SNX17-204ENST00000453453 CLNKQ7Z7G1 428 aa16.08■□□□□ 0.17
SNX17-204ENST00000453453 PCGF5Q86SE9 256 aa16.08■□□□□ 0.17
SNX17-204ENST00000453453 CARNMT1Q8N4J0 409 aa16.08■□□□□ 0.17
SNX17-204ENST00000453453 ZNF75CPQ92670 426 aaPredicted RBP16.08■□□□□ 0.17
SNX17-204ENST00000453453 E2F7Q96AV8 911 aa16.08■□□□□ 0.17
SNX17-204ENST00000453453 P2RY11Q96G91 374 aa16.08■□□□□ 0.17
SNX17-204ENST00000453453 LRCH3Q96II8 777 aa16.08■□□□□ 0.17
SNX17-204ENST00000453453 ASB16Q96NS5 453 aa16.08■□□□□ 0.17
SNX17-204ENST00000453453 TSGA13Q96PP4 275 aa16.08■□□□□ 0.17
SNX17-204ENST00000453453 BTBD10Q9BSF8 475 aa16.08■□□□□ 0.17
SNX17-204ENST00000453453 VPS11Q9H270 941 aa16.08■□□□□ 0.17
SNX17-204ENST00000453453 USP29Q9HBJ7 922 aa16.08■□□□□ 0.17
SNX17-204ENST00000453453 SAYSD1Q9NPB0 183 aa16.08■□□□□ 0.17
SNX17-204ENST00000453453 OBP2AQ9NY56 170 aa16.08■□□□□ 0.17
SNX17-204ENST00000453453 DENND4AQ7Z401 1863 aa16.08■□□□□ 0.16
SNX17-204ENST00000453453 ILVBLA1L0T0 632 aa16.08■□□□□ 0.16
SNX17-204ENST00000453453 HAUS5O94927 633 aa16.08■□□□□ 0.16
SNX17-204ENST00000453453 VAV1P15498 845 aa16.08■□□□□ 0.16
SNX17-204ENST00000453453 KRT15P19012 456 aa16.08■□□□□ 0.16
SNX17-204ENST00000453453 CA4P22748 312 aa16.08■□□□□ 0.16
SNX17-204ENST00000453453 PHBP35232 272 aa16.08■□□□□ 0.16
SNX17-204ENST00000453453 SGSHP51688 502 aa16.08■□□□□ 0.16
SNX17-204ENST00000453453 GNA12Q03113 381 aa16.08■□□□□ 0.16
SNX17-204ENST00000453453 DYNC1I2Q13409 638 aaKnown RBP16.08■□□□□ 0.16
SNX17-204ENST00000453453 CDH18Q13634 790 aa16.08■□□□□ 0.16
SNX17-204ENST00000453453 KPNB1Q14974 876 aaKnown RBP16.08■□□□□ 0.16
SNX17-204ENST00000453453 COL19A1Q14993 1142 aa16.08■□□□□ 0.16
SNX17-204ENST00000453453 TMEM154Q6P9G4 183 aa16.08■□□□□ 0.16
SNX17-204ENST00000453453 ZNF783Q6ZMS7 281 aa16.08■□□□□ 0.16
SNX17-204ENST00000453453 TPGS1Q6ZTW0 290 aa16.08■□□□□ 0.16
SNX17-204ENST00000453453 OTOAQ7RTW8 1153 aa16.08■□□□□ 0.16
SNX17-204ENST00000453453 EGFL6Q8IUX8 553 aa16.08■□□□□ 0.16
SNX17-204ENST00000453453 TP53INP2Q8IXH6 220 aa16.08■□□□□ 0.16
SNX17-204ENST00000453453 PPFIBP2Q8ND30 876 aa16.08■□□□□ 0.16
SNX17-204ENST00000453453 DTNBP1Q96EV8 351 aa16.08■□□□□ 0.16
SNX17-204ENST00000453453 HMCESQ96FZ2 354 aa16.08■□□□□ 0.16
SNX17-204ENST00000453453 C9orf72Q96LT7 481 aa16.08■□□□□ 0.16
SNX17-204ENST00000453453 NR1H4Q96RI1 486 aaPredicted RBP16.08■□□□□ 0.16
SNX17-204ENST00000453453 VAT1Q99536 393 aa16.08■□□□□ 0.16
SNX17-204ENST00000453453 PAIP2Q9BPZ3 127 aaKnown RBP16.08■□□□□ 0.16
SNX17-204ENST00000453453 SP110Q9HB58 689 aa16.08■□□□□ 0.16
SNX17-204ENST00000453453 TRPV4Q9HBA0 871 aa16.08■□□□□ 0.16
SNX17-204ENST00000453453 NMRK1Q9NWW6 199 aa16.08■□□□□ 0.16
SNX17-204ENST00000453453 CDH22Q9UJ99 828 aa16.08■□□□□ 0.16
SNX17-204ENST00000453453 MTO1Q9Y2Z2 717 aaKnown RBP16.08■□□□□ 0.16
SNX17-204ENST00000453453 LAMA3Q16787 3333 aa16.07■□□□□ 0.16
SNX17-204ENST00000453453 MAGEA13PA6NCF6 341 aa16.07■□□□□ 0.16
SNX17-204ENST00000453453 ENO4A6NNW6 628 aa16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms