RNA–Protein interactions for RNA: ENST00000453441.1

COL28A1-205, Transcript of collagen type XXVIII alpha 1 chain, humanhuman

TSL 2

Gene COL28A1, Length 700 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL28A1-205ENST00000453441 PRCCQ92733 491 aaPredicted RBP8.85□□□□□ -0.99
COL28A1-205ENST00000453441 PTPRN2Q92932 1015 aa8.85□□□□□ -0.99
COL28A1-205ENST00000453441 PPP1R16AQ96I34 528 aa8.85□□□□□ -0.99
COL28A1-205ENST00000453441 PBKQ96KB5 322 aa8.85□□□□□ -0.99
COL28A1-205ENST00000453441 SPACA7Q96KW9 195 aa8.85□□□□□ -0.99
COL28A1-205ENST00000453441 RPL10LQ96L21 214 aaKnown RBP8.85□□□□□ -0.99
COL28A1-205ENST00000453441 OLFM3Q96PB7 478 aa8.85□□□□□ -0.99
COL28A1-205ENST00000453441 PSKH2Q96QS6 385 aa8.85□□□□□ -0.99
COL28A1-205ENST00000453441 TUBGCP5Q96RT8 1024 aa8.85□□□□□ -0.99
COL28A1-205ENST00000453441 NAP1L3Q99457 506 aaPredicted RBP8.85□□□□□ -0.99
COL28A1-205ENST00000453441 VAT1Q99536 393 aa8.85□□□□□ -0.99
COL28A1-205ENST00000453441 CINPQ9BW66 212 aaPredicted RBP8.85□□□□□ -0.99
COL28A1-205ENST00000453441 ETNK2Q9NVF9 386 aa8.85□□□□□ -0.99
COL28A1-205ENST00000453441 ZSCAN32Q9NX65 697 aa8.85□□□□□ -0.99
COL28A1-205ENST00000453441 TRMT1Q9NXH9 659 aaKnown RBP8.85□□□□□ -0.99
COL28A1-205ENST00000453441 BCCIPQ9P287 314 aaKnown RBP eCLIP8.85□□□□□ -0.99
COL28A1-205ENST00000453441 TPX2Q9ULW0 747 aaKnown RBP8.85□□□□□ -0.99
COL28A1-205ENST00000453441 PYCARDQ9ULZ3 195 aa8.85□□□□□ -0.99
COL28A1-205ENST00000453441 ZKSCAN5Q9Y2L8 839 aa8.85□□□□□ -0.99
COL28A1-205ENST00000453441 MFHAS1Q9Y4C4 1052 aa8.85□□□□□ -0.99
COL28A1-205ENST00000453441 HEY1Q9Y5J3 304 aa8.85□□□□□ -0.99
COL28A1-205ENST00000453441 NYNRINQ9P2P1 1898 aaKnown RBP8.85□□□□□ -0.99
COL28A1-205ENST00000453441 MUC6Q6W4X9 2439 aa8.84□□□□□ -0.99
COL28A1-205ENST00000453441 PLXND1Q9Y4D7 1925 aa8.84□□□□□ -0.99
COL28A1-205ENST00000453441 A0A1W2PQ67 120 aa8.84□□□□□ -0.99
COL28A1-205ENST00000453441 SLC35F4A4IF30 521 aa8.84□□□□□ -0.99
COL28A1-205ENST00000453441 WASH3PC4AMC7 463 aa8.84□□□□□ -0.99
COL28A1-205ENST00000453441 J3KR12 359 aa8.84□□□□□ -0.99
COL28A1-205ENST00000453441 KCNK3O14649 394 aa8.84□□□□□ -0.99
COL28A1-205ENST00000453441 SLC7A4O43246 635 aa8.84□□□□□ -0.99
COL28A1-205ENST00000453441 NEBLO76041 1014 aa8.84□□□□□ -0.99
COL28A1-205ENST00000453441 POP4O95707 220 aaKnown RBP8.84□□□□□ -0.99
COL28A1-205ENST00000453441 CD160O95971 181 aa8.84□□□□□ -0.99
COL28A1-205ENST00000453441 MT-CO1P00395 513 aa8.84□□□□□ -0.99
COL28A1-205ENST00000453441 IGLV3-19P01714 112 aa8.84□□□□□ -0.99
COL28A1-205ENST00000453441 DNTTP04053 509 aa8.84□□□□□ -0.99
COL28A1-205ENST00000453441 TUBB4AP04350 444 aa8.84□□□□□ -0.99
COL28A1-205ENST00000453441 VSIG8P0DPA2 414 aa8.84□□□□□ -0.99
COL28A1-205ENST00000453441 ACADMP11310 421 aa8.84□□□□□ -0.99
COL28A1-205ENST00000453441 KRT10P13645 584 aa8.84□□□□□ -0.99
COL28A1-205ENST00000453441 HLA-EP13747 358 aa8.84□□□□□ -0.99
COL28A1-205ENST00000453441 TCP1P17987 556 aaKnown RBP8.84□□□□□ -0.99
COL28A1-205ENST00000453441 GABRG2P18507 467 aa8.84□□□□□ -0.99
COL28A1-205ENST00000453441 C5AR1P21730 350 aa8.84□□□□□ -0.99
COL28A1-205ENST00000453441 WASP42768 502 aa8.84□□□□□ -0.99
COL28A1-205ENST00000453441 SUOXP51687 545 aa8.84□□□□□ -0.99
COL28A1-205ENST00000453441 COPAP53621 1224 aa8.84□□□□□ -0.99
COL28A1-205ENST00000453441 AP1S1P61966 158 aa8.84□□□□□ -0.99
COL28A1-205ENST00000453441 DYNLT1P63172 113 aa8.84□□□□□ -0.99
COL28A1-205ENST00000453441 IFI35P80217 286 aaPredicted RBP8.84□□□□□ -0.99
COL28A1-205ENST00000453441 CSTF1Q05048 431 aaKnown RBP8.84□□□□□ -0.99
COL28A1-205ENST00000453441 NOMO1Q15155 1222 aa8.84□□□□□ -0.99
COL28A1-205ENST00000453441 MARC1Q5VT66 337 aa8.84□□□□□ -0.99
COL28A1-205ENST00000453441 KAZNQ674X7 775 aa8.84□□□□□ -0.99
COL28A1-205ENST00000453441 ANO7Q6IWH7 933 aa8.84□□□□□ -0.99
COL28A1-205ENST00000453441 KIAA1211LQ6NV74 962 aa8.84□□□□□ -0.99
COL28A1-205ENST00000453441 LINGO4Q6UY18 593 aa8.84□□□□□ -0.99
COL28A1-205ENST00000453441 SLC36A4Q6YBV0 504 aa8.84□□□□□ -0.99
COL28A1-205ENST00000453441 TMPRSS6Q8IU80 811 aa8.84□□□□□ -0.99
COL28A1-205ENST00000453441 CDKL3Q8IVW4 592 aaPredicted RBP8.84□□□□□ -0.99
COL28A1-205ENST00000453441 MAML2Q8IZL2 1156 aaPredicted RBP8.84□□□□□ -0.99
COL28A1-205ENST00000453441 TEX26Q8N6G2 289 aa8.84□□□□□ -0.99
COL28A1-205ENST00000453441 OR2A12Q8NGT7 310 aa8.84□□□□□ -0.99
COL28A1-205ENST00000453441 HCAR2Q8TDS4 363 aa8.84□□□□□ -0.99
COL28A1-205ENST00000453441 TFB1MQ8WVM0 346 aaKnown RBP8.84□□□□□ -0.99
COL28A1-205ENST00000453441 SIPA1Q96FS4 1042 aa8.84□□□□□ -0.99
COL28A1-205ENST00000453441 MRGPRX1Q96LB2 322 aa8.84□□□□□ -0.99
COL28A1-205ENST00000453441 HHIPQ96QV1 700 aa8.84□□□□□ -0.99
COL28A1-205ENST00000453441 HEPHQ9BQS7 1158 aa8.84□□□□□ -0.99
COL28A1-205ENST00000453441 TLR10Q9BXR5 811 aa8.84□□□□□ -0.99
COL28A1-205ENST00000453441 CPEB1Q9BZB8 566 aaKnown RBP8.84□□□□□ -0.99
COL28A1-205ENST00000453441 POLR1EQ9GZS1 481 aaKnown RBP8.84□□□□□ -0.99
COL28A1-205ENST00000453441 PCED1AQ9H1Q7 454 aa8.84□□□□□ -0.99
COL28A1-205ENST00000453441 SEMA4AQ9H3S1 761 aa8.84□□□□□ -0.99
COL28A1-205ENST00000453441 HOMER3Q9NSC5 361 aa8.84□□□□□ -0.99
COL28A1-205ENST00000453441 FZD4Q9ULV1 537 aa8.84□□□□□ -0.99
COL28A1-205ENST00000453441 PACSIN2Q9UNF0 486 aaPredicted RBP8.84□□□□□ -0.99
COL28A1-205ENST00000453441 NCKAP1Q9Y2A7 1128 aa8.84□□□□□ -0.99
COL28A1-205ENST00000453441 FANCMQ8IYD8 2048 aa8.83□□□□□ -1
COL28A1-205ENST00000453441 SHROOM3Q8TF72 1996 aa8.83□□□□□ -1
COL28A1-205ENST00000453441 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP8.83□□□□□ -1
COL28A1-205ENST00000453441 CFAP69A5D8W1 941 aa8.83□□□□□ -1
COL28A1-205ENST00000453441 SMAD6O43541 496 aaKnown RBP8.83□□□□□ -1
COL28A1-205ENST00000453441 STK10O94804 968 aaKnown RBP8.83□□□□□ -1
COL28A1-205ENST00000453441 PEX11BO96011 259 aa8.83□□□□□ -1
COL28A1-205ENST00000453441 SP9P0CG40 484 aa8.83□□□□□ -1
COL28A1-205ENST00000453441 CCNB1P14635 433 aa8.83□□□□□ -1
COL28A1-205ENST00000453441 PRLRP16471 622 aa8.83□□□□□ -1
COL28A1-205ENST00000453441 CA4P22748 312 aa8.83□□□□□ -1
COL28A1-205ENST00000453441 NFKBIAP25963 317 aa8.83□□□□□ -1
COL28A1-205ENST00000453441 CHRNA3P32297 505 aa8.83□□□□□ -1
COL28A1-205ENST00000453441 MMP13P45452 471 aa8.83□□□□□ -1
COL28A1-205ENST00000453441 CCNHP51946 323 aaPredicted RBP8.83□□□□□ -1
COL28A1-205ENST00000453441 GNG11P61952 73 aa8.83□□□□□ -1
COL28A1-205ENST00000453441 RPS14P62263 151 aaKnown RBP8.83□□□□□ -1
COL28A1-205ENST00000453441 KLF1Q13351 362 aaPredicted RBP8.83□□□□□ -1
COL28A1-205ENST00000453441 PRKD1Q15139 912 aaPredicted RBP8.83□□□□□ -1
COL28A1-205ENST00000453441 CST6Q15828 149 aa8.83□□□□□ -1
COL28A1-205ENST00000453441 SLC14A2Q15849 920 aa8.83□□□□□ -1
COL28A1-205ENST00000453441 MYLK3Q32MK0 819 aa8.83□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms