RNA–Protein interactions for RNA: ENST00000451088.6

GTF3C3-207, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 3

Gene GTF3C3, Length 488 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-207ENST00000451088 APOL1O14791 398 aa4.72□□□□□ -1.65
GTF3C3-207ENST00000451088 TLX3O43711 291 aaPredicted RBP4.72□□□□□ -1.65
GTF3C3-207ENST00000451088 HMMRO75330 724 aa4.72□□□□□ -1.65
GTF3C3-207ENST00000451088 EGR1P18146 543 aa4.72□□□□□ -1.65
GTF3C3-207ENST00000451088 TNFRSF1BP20333 461 aa4.72□□□□□ -1.65
GTF3C3-207ENST00000451088 MMP8P22894 467 aa4.72□□□□□ -1.65
GTF3C3-207ENST00000451088 NDUFS1P28331 727 aa4.72□□□□□ -1.65
GTF3C3-207ENST00000451088 STT3AP46977 705 aa4.72□□□□□ -1.65
GTF3C3-207ENST00000451088 SOX2P48431 317 aa4.72□□□□□ -1.65
GTF3C3-207ENST00000451088 ZNF84P51523 738 aa4.72□□□□□ -1.65
GTF3C3-207ENST00000451088 SLC12A2P55011 1212 aa4.72□□□□□ -1.65
GTF3C3-207ENST00000451088 RHBDL3P58872 404 aa4.72□□□□□ -1.65
GTF3C3-207ENST00000451088 KCTD2Q14681 263 aa4.72□□□□□ -1.65
GTF3C3-207ENST00000451088 EEF1AKMT2Q5JPI9 291 aaKnown RBP4.72□□□□□ -1.65
GTF3C3-207ENST00000451088 FAM57BQ71RH2 274 aa4.72□□□□□ -1.65
GTF3C3-207ENST00000451088 RFX6Q8HWS3 928 aa4.72□□□□□ -1.65
GTF3C3-207ENST00000451088 MMP21Q8N119 569 aa4.72□□□□□ -1.65
GTF3C3-207ENST00000451088 TMEM57Q8N5G2 664 aa4.72□□□□□ -1.65
GTF3C3-207ENST00000451088 CCDC33Q8N5R6 958 aa4.72□□□□□ -1.65
GTF3C3-207ENST00000451088 CCDC150Q8NCX0 1101 aa4.72□□□□□ -1.65
GTF3C3-207ENST00000451088 OR52L2PQ8NGH6 319 aa4.72□□□□□ -1.65
GTF3C3-207ENST00000451088 PIGKQ92643 395 aa4.72□□□□□ -1.65
GTF3C3-207ENST00000451088 GJA10Q969M2 543 aa4.72□□□□□ -1.65
GTF3C3-207ENST00000451088 ZNF845Q96IR2 970 aaPredicted RBP4.72□□□□□ -1.65
GTF3C3-207ENST00000451088 SENP7Q9BQF6 1050 aa4.72□□□□□ -1.65
GTF3C3-207ENST00000451088 PCDHAC1Q9H158 963 aa4.72□□□□□ -1.65
GTF3C3-207ENST00000451088 CERS4Q9HA82 394 aa4.72□□□□□ -1.65
GTF3C3-207ENST00000451088 SEMA4BQ9NPR2 832 aaPredicted RBP4.72□□□□□ -1.65
GTF3C3-207ENST00000451088 DDX4Q9NQI0 724 aaKnown RBP4.72□□□□□ -1.65
GTF3C3-207ENST00000451088 STARD7Q9NQZ5 370 aa4.72□□□□□ -1.65
GTF3C3-207ENST00000451088 TMEM45AQ9NWC5 275 aa4.72□□□□□ -1.65
GTF3C3-207ENST00000451088 ASNSD1Q9NWL6 643 aa4.72□□□□□ -1.65
GTF3C3-207ENST00000451088 FRMD4AQ9P2Q2 1039 aaPredicted RBP4.72□□□□□ -1.65
GTF3C3-207ENST00000451088 PLXNA3P51805 1871 aa4.72□□□□□ -1.65
GTF3C3-207ENST00000451088 DCHS1Q96JQ0 3298 aa4.72□□□□□ -1.65
GTF3C3-207ENST00000451088 NAV2Q8IVL1 2488 aa4.71□□□□□ -1.65
GTF3C3-207ENST00000451088 UNC79Q9P2D8 2635 aa4.71□□□□□ -1.66
GTF3C3-207ENST00000451088 CCDC187A0A096LP49 1063 aa4.71□□□□□ -1.66
GTF3C3-207ENST00000451088 PNMA6EA0A0J9YXQ4 647 aa4.71□□□□□ -1.66
GTF3C3-207ENST00000451088 EPOPA6NHQ4 379 aa4.71□□□□□ -1.66
GTF3C3-207ENST00000451088 DHHO43323 396 aa4.71□□□□□ -1.66
GTF3C3-207ENST00000451088 TULP3O75386 442 aa4.71□□□□□ -1.66
GTF3C3-207ENST00000451088 IDH1O75874 414 aaKnown RBP4.71□□□□□ -1.66
GTF3C3-207ENST00000451088 ST6GAL1P15907 406 aa4.71□□□□□ -1.66
GTF3C3-207ENST00000451088 HOXB6P17509 224 aaKnown RBP4.71□□□□□ -1.66
GTF3C3-207ENST00000451088 VPS41P49754 854 aa4.71□□□□□ -1.66
GTF3C3-207ENST00000451088 HMGCS2P54868 508 aa4.71□□□□□ -1.66
GTF3C3-207ENST00000451088 BACE1P56817 501 aa4.71□□□□□ -1.66
GTF3C3-207ENST00000451088 CCNA1P78396 465 aa4.71□□□□□ -1.66
GTF3C3-207ENST00000451088 SEMA3BQ13214 749 aa4.71□□□□□ -1.66
GTF3C3-207ENST00000451088 PRAMEF19Q5SWL8 479 aa4.71□□□□□ -1.66
GTF3C3-207ENST00000451088 CCDC144NLQ6NUI1 221 aa4.71□□□□□ -1.66
GTF3C3-207ENST00000451088 ACSM6Q6P461 480 aa4.71□□□□□ -1.66
GTF3C3-207ENST00000451088 KYAT3Q6YP21 454 aaKnown RBP4.71□□□□□ -1.66
GTF3C3-207ENST00000451088 ZNF793Q6ZN11 406 aa4.71□□□□□ -1.66
GTF3C3-207ENST00000451088 C9orf47Q6ZRZ4 202 aa4.71□□□□□ -1.66
GTF3C3-207ENST00000451088 PIK3AP1Q6ZUJ8 805 aa4.71□□□□□ -1.66
GTF3C3-207ENST00000451088 ASCL5Q7RTU5 278 aa4.71□□□□□ -1.66
GTF3C3-207ENST00000451088 ANKRD33Q7Z3H0 272 aa4.71□□□□□ -1.66
GTF3C3-207ENST00000451088 PIM3Q86V86 326 aa4.71□□□□□ -1.66
GTF3C3-207ENST00000451088 SKAP1Q86WV1 359 aa4.71□□□□□ -1.66
GTF3C3-207ENST00000451088 TMEM199Q8N511 208 aa4.71□□□□□ -1.66
GTF3C3-207ENST00000451088 GLMPQ8WWB7 406 aa4.71□□□□□ -1.66
GTF3C3-207ENST00000451088 ATOH1Q92858 354 aaPredicted RBP4.71□□□□□ -1.66
GTF3C3-207ENST00000451088 C8orf48Q96LL4 319 aa4.71□□□□□ -1.66
GTF3C3-207ENST00000451088 SCNM1Q9BWG6 230 aa4.71□□□□□ -1.66
GTF3C3-207ENST00000451088 EIF2AQ9BY44 585 aaKnown RBP4.71□□□□□ -1.66
GTF3C3-207ENST00000451088 AATFQ9NY61 560 aaKnown RBP eCLIP4.71□□□□□ -1.66
GTF3C3-207ENST00000451088 WDR87Q6ZQQ6 2873 aa4.71□□□□□ -1.66
GTF3C3-207ENST00000451088 SETXQ7Z333 2677 aaKnown RBP4.71□□□□□ -1.66
GTF3C3-207ENST00000451088 FLT1P17948 1338 aa4.71□□□□□ -1.66
GTF3C3-207ENST00000451088 ZBED9Q6R2W3 1325 aa4.71□□□□□ -1.66
GTF3C3-207ENST00000451088 MYH13Q9UKX3 1938 aa4.7□□□□□ -1.66
GTF3C3-207ENST00000451088 C5orf42Q9H799 3197 aa4.7□□□□□ -1.66
GTF3C3-207ENST00000451088 ZNF292O60281 2723 aa4.7□□□□□ -1.66
GTF3C3-207ENST00000451088 A0A0G2JMZ2 1700 aa4.7□□□□□ -1.66
GTF3C3-207ENST00000451088 SLC15A5A6NIM6 579 aa4.7□□□□□ -1.66
GTF3C3-207ENST00000451088 ZNF814B7Z6K7 855 aa4.7□□□□□ -1.66
GTF3C3-207ENST00000451088 ZSCAN9O15535 394 aaPredicted RBP4.7□□□□□ -1.66
GTF3C3-207ENST00000451088 SEPT4O43236 478 aa4.7□□□□□ -1.66
GTF3C3-207ENST00000451088 NDST3O95803 873 aa4.7□□□□□ -1.66
GTF3C3-207ENST00000451088 HOXC6P09630 235 aa4.7□□□□□ -1.66
GTF3C3-207ENST00000451088 IFIT2P09913 472 aaKnown RBP4.7□□□□□ -1.66
GTF3C3-207ENST00000451088 CYBAP13498 195 aa4.7□□□□□ -1.66
GTF3C3-207ENST00000451088 IDEP14735 1019 aa4.7□□□□□ -1.66
GTF3C3-207ENST00000451088 IL9P15248 144 aa4.7□□□□□ -1.66
GTF3C3-207ENST00000451088 PECAM1P16284 738 aaPredicted RBP4.7□□□□□ -1.66
GTF3C3-207ENST00000451088 TFEBP19484 476 aa4.7□□□□□ -1.66
GTF3C3-207ENST00000451088 SCP2P22307 547 aa4.7□□□□□ -1.66
GTF3C3-207ENST00000451088 MTA1Q13330 715 aa4.7□□□□□ -1.66
GTF3C3-207ENST00000451088 BFSP2Q13515 415 aa4.7□□□□□ -1.66
GTF3C3-207ENST00000451088 SAFBQ15424 915 aaKnown RBP eCLIP4.7□□□□□ -1.66
GTF3C3-207ENST00000451088 ELF2Q15723 593 aa4.7□□□□□ -1.66
GTF3C3-207ENST00000451088 COBLL1Q53SF7 1204 aa4.7□□□□□ -1.66
GTF3C3-207ENST00000451088 PSRC1Q6PGN9 363 aaPredicted RBP4.7□□□□□ -1.66
GTF3C3-207ENST00000451088 CRELD2Q6UXH1 353 aaPredicted RBP4.7□□□□□ -1.66
GTF3C3-207ENST00000451088 COLCA1Q6ZS62 124 aa4.7□□□□□ -1.66
GTF3C3-207ENST00000451088 UEVLDQ8IX04 471 aa4.7□□□□□ -1.66
GTF3C3-207ENST00000451088 LAS2Q8IYD9 372 aa4.7□□□□□ -1.66
GTF3C3-207ENST00000451088 GLIS1Q8NBF1 620 aa4.7□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms