RNA–Protein interactions for RNA: ENST00000445866.6

SGCE-206, Transcript of sarcoglycan epsilon, humanhuman

TSL 5 BASIC

Gene SGCE, Length 1,666 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-206ENST00000445866 M0R296 226 aa17.61■□□□□ 0.41
SGCE-206ENST00000445866 RIOK3O14730 519 aaKnown RBP17.61■□□□□ 0.41
SGCE-206ENST00000445866 PMPCBO75439 489 aa17.61■□□□□ 0.41
SGCE-206ENST00000445866 ANXA9O76027 345 aa17.61■□□□□ 0.41
SGCE-206ENST00000445866 MT-CYBP00156 380 aaPredicted RBP17.61■□□□□ 0.41
SGCE-206ENST00000445866 MMP2P08253 660 aa17.61■□□□□ 0.41
SGCE-206ENST00000445866 LMAN1P49257 510 aa17.61■□□□□ 0.41
SGCE-206ENST00000445866 SKOR1P84550 965 aa17.61■□□□□ 0.41
SGCE-206ENST00000445866 BCL2L1Q07817 233 aa17.61■□□□□ 0.41
SGCE-206ENST00000445866 CAMK2GQ13555 558 aaPredicted RBP17.61■□□□□ 0.41
SGCE-206ENST00000445866 KDELC2Q7Z4H8 507 aa17.61■□□□□ 0.41
SGCE-206ENST00000445866 OXNAD1Q96HP4 312 aaPredicted RBP17.61■□□□□ 0.41
SGCE-206ENST00000445866 NSMCE3Q96MG7 304 aa17.61■□□□□ 0.41
SGCE-206ENST00000445866 ATP13A3Q9H7F0 1226 aa17.61■□□□□ 0.41
SGCE-206ENST00000445866 IL36AQ9UHA7 158 aa17.61■□□□□ 0.41
SGCE-206ENST00000445866 MMP17Q9ULZ9 603 aa17.61■□□□□ 0.41
SGCE-206ENST00000445866 AAR2Q9Y312 384 aaKnown RBP17.61■□□□□ 0.41
SGCE-206ENST00000445866 MYOFQ9NZM1 2061 aa17.61■□□□□ 0.41
SGCE-206ENST00000445866 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP17.61■□□□□ 0.41
SGCE-206ENST00000445866 A0A1W2PQF6 199 aa17.61■□□□□ 0.41
SGCE-206ENST00000445866 EFCAB8A8MWE9 144 aa17.61■□□□□ 0.41
SGCE-206ENST00000445866 CHURC1-FNTBB4DL54 471 aa17.61■□□□□ 0.41
SGCE-206ENST00000445866 RNASEH1O60930 286 aaKnown RBP17.61■□□□□ 0.41
SGCE-206ENST00000445866 GEMP55040 296 aa17.61■□□□□ 0.41
SGCE-206ENST00000445866 BASP1P80723 227 aaKnown RBP17.61■□□□□ 0.41
SGCE-206ENST00000445866 GAS6Q14393 721 aa17.61■□□□□ 0.41
SGCE-206ENST00000445866 ELAVL3Q14576 367 aaKnown RBP17.61■□□□□ 0.41
SGCE-206ENST00000445866 IHHQ14623 411 aa17.61■□□□□ 0.41
SGCE-206ENST00000445866 SYCP2LQ5T4T6 812 aa17.61■□□□□ 0.41
SGCE-206ENST00000445866 KIAA1211LQ6NV74 962 aa17.61■□□□□ 0.41
SGCE-206ENST00000445866 DSG4Q86SJ6 1040 aa17.61■□□□□ 0.41
SGCE-206ENST00000445866 CAMK1DQ8IU85 385 aa17.61■□□□□ 0.41
SGCE-206ENST00000445866 GRIN3AQ8TCU5 1115 aa17.61■□□□□ 0.41
SGCE-206ENST00000445866 PPP1R2P1Q96PQ5 205 aa17.61■□□□□ 0.41
SGCE-206ENST00000445866 CPEB1Q9BZB8 566 aaKnown RBP17.61■□□□□ 0.41
SGCE-206ENST00000445866 SNX24Q9Y343 169 aa17.61■□□□□ 0.41
SGCE-206ENST00000445866 RAI2Q9Y5P3 530 aa17.61■□□□□ 0.41
SGCE-206ENST00000445866 GOLGA6CA6NDK9 693 aa17.6■□□□□ 0.41
SGCE-206ENST00000445866 GOLGA6BA6NDN3 693 aa17.6■□□□□ 0.41
SGCE-206ENST00000445866 PSMD3O43242 534 aa17.6■□□□□ 0.41
SGCE-206ENST00000445866 LEFTY1O75610 366 aa17.6■□□□□ 0.41
SGCE-206ENST00000445866 IL1BP01584 269 aa17.6■□□□□ 0.41
SGCE-206ENST00000445866 PRNPP04156 253 aa17.6■□□□□ 0.41
SGCE-206ENST00000445866 GOLGA6DP0CG33 693 aa17.6■□□□□ 0.41
SGCE-206ENST00000445866 RPS9P46781 194 aaKnown RBP17.6■□□□□ 0.41
SGCE-206ENST00000445866 TUBB4BP68371 445 aa17.6■□□□□ 0.41
SGCE-206ENST00000445866 GRM3Q14832 879 aa17.6■□□□□ 0.41
SGCE-206ENST00000445866 PCSK7Q16549 785 aa17.6■□□□□ 0.41
SGCE-206ENST00000445866 TEX35Q5T0J7 233 aa17.6■□□□□ 0.41
SGCE-206ENST00000445866 TMEM92Q6UXU6 159 aa17.6■□□□□ 0.41
SGCE-206ENST00000445866 GDPD4Q6W3E5 623 aa17.6■□□□□ 0.41
SGCE-206ENST00000445866 MMAAQ8IVH4 418 aaKnown RBP17.6■□□□□ 0.41
SGCE-206ENST00000445866 PAF1Q8N7H5 531 aa17.6■□□□□ 0.41
SGCE-206ENST00000445866 PDCD7Q8N8D1 485 aaKnown RBP17.6■□□□□ 0.41
SGCE-206ENST00000445866 SUV39H2Q9H5I1 410 aa17.6■□□□□ 0.41
SGCE-206ENST00000445866 VPS45Q9NRW7 570 aa17.6■□□□□ 0.41
SGCE-206ENST00000445866 GOLGA6AQ9NYA3 693 aa17.6■□□□□ 0.41
SGCE-206ENST00000445866 PPM1HQ9ULR3 514 aa17.6■□□□□ 0.41
SGCE-206ENST00000445866 TCF20Q9UGU0 1960 aaKnown RBP17.6■□□□□ 0.41
SGCE-206ENST00000445866 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP17.59■□□□□ 0.41
SGCE-206ENST00000445866 PI15O43692 258 aa17.59■□□□□ 0.41
SGCE-206ENST00000445866 PIGNO95427 931 aa17.59■□□□□ 0.41
SGCE-206ENST00000445866 UGT2B4P06133 528 aa17.59■□□□□ 0.41
SGCE-206ENST00000445866 APRTP07741 180 aa17.59■□□□□ 0.41
SGCE-206ENST00000445866 RHOXF2BP0C7M4 288 aa17.59■□□□□ 0.41
SGCE-206ENST00000445866 IVDP26440 423 aa17.59■□□□□ 0.41
SGCE-206ENST00000445866 WNT3AP56704 352 aa17.59■□□□□ 0.41
SGCE-206ENST00000445866 MPP3Q13368 585 aa17.59■□□□□ 0.41
SGCE-206ENST00000445866 CRY1Q16526 586 aa17.59■□□□□ 0.41
SGCE-206ENST00000445866 SYT13Q7L8C5 426 aa17.59■□□□□ 0.41
SGCE-206ENST00000445866 TMIEQ8NEW7 156 aa17.59■□□□□ 0.41
SGCE-206ENST00000445866 IPMKQ8NFU5 416 aa17.59■□□□□ 0.41
SGCE-206ENST00000445866 OR2T3Q8NH03 318 aa17.59■□□□□ 0.41
SGCE-206ENST00000445866 PDCD6IPQ8WUM4 868 aaKnown RBP17.59■□□□□ 0.41
SGCE-206ENST00000445866 TADA1Q96BN2 335 aa17.59■□□□□ 0.41
SGCE-206ENST00000445866 LRIG1Q96JA1 1093 aa17.59■□□□□ 0.41
SGCE-206ENST00000445866 ZNF641Q96N77 438 aaPredicted RBP17.59■□□□□ 0.41
SGCE-206ENST00000445866 TUBGCP5Q96RT8 1024 aa17.59■□□□□ 0.41
SGCE-206ENST00000445866 GORASP1Q9BQQ3 440 aa17.59■□□□□ 0.41
SGCE-206ENST00000445866 RHOXF2Q9BQY4 288 aa17.59■□□□□ 0.41
SGCE-206ENST00000445866 MLPHQ9BV36 600 aaPredicted RBP17.59■□□□□ 0.41
SGCE-206ENST00000445866 RAB17Q9H0T7 212 aa17.59■□□□□ 0.41
SGCE-206ENST00000445866 DPH5Q9H2P9 285 aa17.59■□□□□ 0.41
SGCE-206ENST00000445866 CHRDQ9H2X0 955 aa17.59■□□□□ 0.41
SGCE-206ENST00000445866 TPX2Q9ULW0 747 aaKnown RBP17.59■□□□□ 0.41
SGCE-206ENST00000445866 WASF2Q9Y6W5 498 aa17.59■□□□□ 0.41
SGCE-206ENST00000445866 ALOX15BO15296 676 aa17.58■□□□□ 0.41
SGCE-206ENST00000445866 HEXIM1O94992 359 aaKnown RBP17.58■□□□□ 0.41
SGCE-206ENST00000445866 CTSLP07711 333 aa17.58■□□□□ 0.41
SGCE-206ENST00000445866 COL9A1P20849 921 aa17.58■□□□□ 0.41
SGCE-206ENST00000445866 SERPINA4P29622 427 aa17.58■□□□□ 0.41
SGCE-206ENST00000445866 TNNT3P45378 269 aaPredicted RBP17.58■□□□□ 0.41
SGCE-206ENST00000445866 GUCY2DQ02846 1103 aa17.58■□□□□ 0.41
SGCE-206ENST00000445866 SEMA5AQ13591 1074 aa17.58■□□□□ 0.41
SGCE-206ENST00000445866 SPARCL1Q14515 664 aa17.58■□□□□ 0.41
SGCE-206ENST00000445866 POM121L1PQ3SYA9 428 aa17.58■□□□□ 0.41
SGCE-206ENST00000445866 DUPD1Q68J44 220 aa17.58■□□□□ 0.41
SGCE-206ENST00000445866 TMPRSS6Q8IU80 811 aa17.58■□□□□ 0.41
SGCE-206ENST00000445866 SPEM1Q8N4L4 309 aa17.58■□□□□ 0.41
SGCE-206ENST00000445866 PIP4K2CQ8TBX8 421 aa17.58■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms