RNA–Protein interactions for RNA: ENST00000443727.1

LRCH3-208, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 4

Gene LRCH3, Length 611 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-208ENST00000443727 LRCH4O75427 683 aa20.36■□□□□ 0.85
LRCH3-208ENST00000443727 LDOC1O95751 146 aaPredicted RBP20.36■□□□□ 0.85
LRCH3-208ENST00000443727 CLDN2P57739 230 aa20.36■□□□□ 0.85
LRCH3-208ENST00000443727 BNIP3Q12983 259 aa20.36■□□□□ 0.85
LRCH3-208ENST00000443727 PTAR1Q7Z6K3 402 aaPredicted RBP20.36■□□□□ 0.85
LRCH3-208ENST00000443727 TTC7BQ86TV6 843 aa20.36■□□□□ 0.85
LRCH3-208ENST00000443727 ZSCAN30Q86W11 494 aa20.36■□□□□ 0.85
LRCH3-208ENST00000443727 GATA6Q92908 595 aa20.36■□□□□ 0.85
LRCH3-208ENST00000443727 EXOC2Q96KP1 924 aa20.36■□□□□ 0.85
LRCH3-208ENST00000443727 CNDP2Q96KP4 475 aaKnown RBP20.36■□□□□ 0.85
LRCH3-208ENST00000443727 LRRC19Q9H756 370 aa20.36■□□□□ 0.85
LRCH3-208ENST00000443727 A6NNZ2 444 aa20.35■□□□□ 0.85
LRCH3-208ENST00000443727 DFFAO00273 331 aa20.35■□□□□ 0.85
LRCH3-208ENST00000443727 SDC3O75056 442 aa20.35■□□□□ 0.85
LRCH3-208ENST00000443727 PAK4O96013 591 aaPredicted RBP20.35■□□□□ 0.85
LRCH3-208ENST00000443727 ERCC2P18074 760 aa20.35■□□□□ 0.85
LRCH3-208ENST00000443727 XPAP23025 273 aaPredicted RBP20.35■□□□□ 0.85
LRCH3-208ENST00000443727 PCK1P35558 622 aa20.35■□□□□ 0.85
LRCH3-208ENST00000443727 ABL2P42684 1182 aa20.35■□□□□ 0.85
LRCH3-208ENST00000443727 PAPOLAP51003 745 aaKnown RBP20.35■□□□□ 0.85
LRCH3-208ENST00000443727 ZNF135P52742 658 aaPredicted RBP20.35■□□□□ 0.85
LRCH3-208ENST00000443727 ACAP1Q15027 740 aa20.35■□□□□ 0.85
LRCH3-208ENST00000443727 OR13H1Q8NG92 308 aa20.35■□□□□ 0.85
LRCH3-208ENST00000443727 SLC39A8Q9C0K1 460 aa20.35■□□□□ 0.85
LRCH3-208ENST00000443727 THAP2Q9H0W7 228 aa20.35■□□□□ 0.85
LRCH3-208ENST00000443727 ZWILCHQ9H900 591 aa20.35■□□□□ 0.85
LRCH3-208ENST00000443727 TOR4AQ9NXH8 423 aa20.35■□□□□ 0.85
LRCH3-208ENST00000443727 ITM2BQ9Y287 266 aa20.35■□□□□ 0.85
LRCH3-208ENST00000443727 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP20.35■□□□□ 0.85
LRCH3-208ENST00000443727 CHD5Q8TDI0 1954 aa20.35■□□□□ 0.85
LRCH3-208ENST00000443727 TMEM8BA6NDV4 472 aa20.34■□□□□ 0.85
LRCH3-208ENST00000443727 IGLON5A6NGN9 336 aa20.34■□□□□ 0.85
LRCH3-208ENST00000443727 H3BRJ5 948 aa20.34■□□□□ 0.85
LRCH3-208ENST00000443727 J3KR12 359 aa20.34■□□□□ 0.85
LRCH3-208ENST00000443727 ENC1O14682 589 aa20.34■□□□□ 0.85
LRCH3-208ENST00000443727 PRAMEF11O60813 436 aa20.34■□□□□ 0.85
LRCH3-208ENST00000443727 GYPCP04921 128 aa20.34■□□□□ 0.85
LRCH3-208ENST00000443727 CASP14P31944 242 aa20.34■□□□□ 0.85
LRCH3-208ENST00000443727 PIGHQ14442 188 aaPredicted RBP20.34■□□□□ 0.85
LRCH3-208ENST00000443727 CYTH1Q15438 398 aa20.34■□□□□ 0.85
LRCH3-208ENST00000443727 LRRC73Q5JTD7 316 aa20.34■□□□□ 0.85
LRCH3-208ENST00000443727 CFAP58Q5T655 872 aa20.34■□□□□ 0.85
LRCH3-208ENST00000443727 GCNT7Q6ZNI0 430 aa20.34■□□□□ 0.85
LRCH3-208ENST00000443727 Q6ZSR6 202 aa20.34■□□□□ 0.85
LRCH3-208ENST00000443727 FAM174AQ8TBP5 190 aa20.34■□□□□ 0.85
LRCH3-208ENST00000443727 HSPH1Q92598 858 aa20.34■□□□□ 0.85
LRCH3-208ENST00000443727 XPO4Q9C0E2 1151 aaKnown RBP20.34■□□□□ 0.85
LRCH3-208ENST00000443727 SP110Q9HB58 689 aa20.34■□□□□ 0.85
LRCH3-208ENST00000443727 KLHL11Q9NVR0 708 aa20.34■□□□□ 0.85
LRCH3-208ENST00000443727 LHX3Q9UBR4 397 aa20.34■□□□□ 0.85
LRCH3-208ENST00000443727 GGT7Q9UJ14 662 aa20.34■□□□□ 0.85
LRCH3-208ENST00000443727 MFHAS1Q9Y4C4 1052 aa20.34■□□□□ 0.85
LRCH3-208ENST00000443727 HS3ST3A1Q9Y663 406 aa20.34■□□□□ 0.85
LRCH3-208ENST00000443727 FRYQ5TBA9 3013 aa20.33■□□□□ 0.85
LRCH3-208ENST00000443727 A0A087X0T9 212 aa20.33■□□□□ 0.85
LRCH3-208ENST00000443727 FAM221BA6H8Z2 402 aa20.33■□□□□ 0.85
LRCH3-208ENST00000443727 FPGTO14772 594 aa20.33■□□□□ 0.85
LRCH3-208ENST00000443727 INSIG1O15503 277 aa20.33■□□□□ 0.85
LRCH3-208ENST00000443727 PALMO75781 387 aa20.33■□□□□ 0.85
LRCH3-208ENST00000443727 FAM228BP0C875 321 aa20.33■□□□□ 0.85
LRCH3-208ENST00000443727 ARL4AP40617 200 aa20.33■□□□□ 0.85
LRCH3-208ENST00000443727 HCAR3P49019 387 aa20.33■□□□□ 0.85
LRCH3-208ENST00000443727 FGL2Q14314 439 aa20.33■□□□□ 0.85
LRCH3-208ENST00000443727 SMTNL2Q2TAL5 461 aa20.33■□□□□ 0.85
LRCH3-208ENST00000443727 BOLA3Q53S33 107 aa20.33■□□□□ 0.85
LRCH3-208ENST00000443727 HS1BP3Q53T59 392 aa20.33■□□□□ 0.85
LRCH3-208ENST00000443727 CCDC122Q5T0U0 273 aa20.33■□□□□ 0.85
LRCH3-208ENST00000443727 ALKBH5Q6P6C2 394 aaKnown RBP20.33■□□□□ 0.85
LRCH3-208ENST00000443727 CYP4V2Q6ZWL3 525 aaPredicted RBP20.33■□□□□ 0.85
LRCH3-208ENST00000443727 ABI3BPQ7Z7G0 1075 aa20.33■□□□□ 0.85
LRCH3-208ENST00000443727 DCP2Q8IU60 420 aaKnown RBP20.33■□□□□ 0.85
LRCH3-208ENST00000443727 PAF1Q8N7H5 531 aa20.33■□□□□ 0.85
LRCH3-208ENST00000443727 ZCCHC14Q8WYQ9 949 aaKnown RBP20.33■□□□□ 0.85
LRCH3-208ENST00000443727 NUP85Q9BW27 656 aa20.33■□□□□ 0.85
LRCH3-208ENST00000443727 C1QTNF2Q9BXJ5 285 aa20.33■□□□□ 0.85
LRCH3-208ENST00000443727 TMEM121BQ9BXQ6 578 aaPredicted RBP20.33■□□□□ 0.85
LRCH3-208ENST00000443727 CPEB1Q9BZB8 566 aaKnown RBP20.33■□□□□ 0.85
LRCH3-208ENST00000443727 PDFQ9HBH1 243 aa20.33■□□□□ 0.85
LRCH3-208ENST00000443727 CWC15Q9P013 229 aaKnown RBP20.33■□□□□ 0.85
LRCH3-208ENST00000443727 IP6K2Q9UHH9 426 aa20.33■□□□□ 0.85
LRCH3-208ENST00000443727 IPO11Q9UI26 975 aaKnown RBP20.33■□□□□ 0.85
LRCH3-208ENST00000443727 ANAPC7Q9UJX3 599 aa20.33■□□□□ 0.85
LRCH3-208ENST00000443727 TP53BP1Q12888 1972 aaPredicted RBP20.33■□□□□ 0.84
LRCH3-208ENST00000443727 IGF2RP11717 2491 aa20.32■□□□□ 0.84
LRCH3-208ENST00000443727 USP24Q9UPU5 2620 aa20.32■□□□□ 0.84
LRCH3-208ENST00000443727 DOCK9Q9BZ29 2069 aa20.32■□□□□ 0.84
LRCH3-208ENST00000443727 CBFA2T2O43439 604 aa20.32■□□□□ 0.84
LRCH3-208ENST00000443727 SSR1P43307 286 aaKnown RBP20.32■□□□□ 0.84
LRCH3-208ENST00000443727 GRM3Q14832 879 aa20.32■□□□□ 0.84
LRCH3-208ENST00000443727 GALNT15Q8N3T1 639 aa20.32■□□□□ 0.84
LRCH3-208ENST00000443727 KDF1Q8NAX2 398 aaPredicted RBP20.32■□□□□ 0.84
LRCH3-208ENST00000443727 CXorf40AQ8TE69 158 aa20.32■□□□□ 0.84
LRCH3-208ENST00000443727 CINPQ9BW66 212 aaPredicted RBP20.32■□□□□ 0.84
LRCH3-208ENST00000443727 STAU2Q9NUL3 570 aaKnown RBP eCLIP20.32■□□□□ 0.84
LRCH3-208ENST00000443727 DNAJC28Q9NX36 388 aa20.32■□□□□ 0.84
LRCH3-208ENST00000443727 DKK3Q9UBP4 350 aa20.32■□□□□ 0.84
LRCH3-208ENST00000443727 AKAP13Q12802 2813 aa20.31■□□□□ 0.84
LRCH3-208ENST00000443727 AREL1O15033 823 aa20.31■□□□□ 0.84
LRCH3-208ENST00000443727 RAD51BO15315 384 aa20.31■□□□□ 0.84
LRCH3-208ENST00000443727 MMP20O60882 483 aa20.31■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms