RNA–Protein interactions for RNA: ENST00000431640.5

DDX56-204, Transcript of DEAD-box helicase 56, humanhuman

TSL 1 (best) BASIC

Gene DDX56, Length 1,554 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-204ENST00000431640 SLC38A8A6NNN8 435 aa12.98□□□□□ -0.33
DDX56-204ENST00000431640 FGF18O76093 207 aa12.98□□□□□ -0.33
DDX56-204ENST00000431640 KLHL2O95198 593 aa12.98□□□□□ -0.33
DDX56-204ENST00000431640 VAPBO95292 243 aa12.98□□□□□ -0.33
DDX56-204ENST00000431640 PAPSS2O95340 614 aaPredicted RBP12.98□□□□□ -0.33
DDX56-204ENST00000431640 PEX11BO96011 259 aa12.98□□□□□ -0.33
DDX56-204ENST00000431640 AHSGP02765 367 aa12.98□□□□□ -0.33
DDX56-204ENST00000431640 PRKCGP05129 697 aa12.98□□□□□ -0.33
DDX56-204ENST00000431640 SERPINA6P08185 405 aa12.98□□□□□ -0.33
DDX56-204ENST00000431640 MYL4P12829 197 aa12.98□□□□□ -0.33
DDX56-204ENST00000431640 RPL17P18621 184 aaKnown RBP12.98□□□□□ -0.33
DDX56-204ENST00000431640 KCNA4P22459 653 aa12.98□□□□□ -0.33
DDX56-204ENST00000431640 CRABP2P29373 138 aa12.98□□□□□ -0.33
DDX56-204ENST00000431640 ARCN1P48444 511 aaKnown RBP12.98□□□□□ -0.33
DDX56-204ENST00000431640 HARS2P49590 506 aaKnown RBP12.98□□□□□ -0.33
DDX56-204ENST00000431640 WNT3AP56704 352 aa12.98□□□□□ -0.33
DDX56-204ENST00000431640 ABCE1P61221 599 aaKnown RBP12.98□□□□□ -0.33
DDX56-204ENST00000431640 ITKQ08881 620 aa12.98□□□□□ -0.33
DDX56-204ENST00000431640 DUSP4Q13115 394 aa12.98□□□□□ -0.33
DDX56-204ENST00000431640 USP10Q14694 798 aaKnown RBP12.98□□□□□ -0.33
DDX56-204ENST00000431640 POU6F1Q14863 301 aa12.98□□□□□ -0.33
DDX56-204ENST00000431640 POLD3Q15054 466 aaPredicted RBP12.98□□□□□ -0.33
DDX56-204ENST00000431640 WASHC2DQ5SRD0 308 aa12.98□□□□□ -0.33
DDX56-204ENST00000431640 ICE2Q659A1 982 aa12.98□□□□□ -0.33
DDX56-204ENST00000431640 KDELC1Q6UW63 502 aa12.98□□□□□ -0.33
DDX56-204ENST00000431640 RAPH1Q70E73 1250 aa12.98□□□□□ -0.33
DDX56-204ENST00000431640 CMC1Q7Z7K0 106 aa12.98□□□□□ -0.33
DDX56-204ENST00000431640 MIB1Q86YT6 1006 aa12.98□□□□□ -0.33
DDX56-204ENST00000431640 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP12.98□□□□□ -0.33
DDX56-204ENST00000431640 OR6Y1Q8NGX8 325 aa12.98□□□□□ -0.33
DDX56-204ENST00000431640 HMCESQ96FZ2 354 aa12.98□□□□□ -0.33
DDX56-204ENST00000431640 RILPQ96NA2 401 aa12.98□□□□□ -0.33
DDX56-204ENST00000431640 TTLL2Q9BWV7 592 aa12.98□□□□□ -0.33
DDX56-204ENST00000431640 SPG21Q9NZD8 308 aa12.98□□□□□ -0.33
DDX56-204ENST00000431640 SLC39A10Q9ULF5 831 aa12.98□□□□□ -0.33
DDX56-204ENST00000431640 APOBEC2Q9Y235 224 aaKnown RBP12.98□□□□□ -0.33
DDX56-204ENST00000431640 CDY1Q9Y6F8 540 aa12.98□□□□□ -0.33
DDX56-204ENST00000431640 PDE4DIPQ5VU43 2346 aa12.97□□□□□ -0.33
DDX56-204ENST00000431640 TRIM13O60858 407 aa12.97□□□□□ -0.33
DDX56-204ENST00000431640 RAMP2O60895 175 aa12.97□□□□□ -0.33
DDX56-204ENST00000431640 TBX18O95935 607 aa12.97□□□□□ -0.33
DDX56-204ENST00000431640 TOP3BO95985 862 aaKnown RBP12.97□□□□□ -0.33
DDX56-204ENST00000431640 SOD2P04179 222 aa12.97□□□□□ -0.33
DDX56-204ENST00000431640 KITP10721 976 aa12.97□□□□□ -0.33
DDX56-204ENST00000431640 EZRP15311 586 aaKnown RBP12.97□□□□□ -0.33
DDX56-204ENST00000431640 BMP8BP34820 402 aa12.97□□□□□ -0.33
DDX56-204ENST00000431640 CTNNB1P35222 781 aa12.97□□□□□ -0.33
DDX56-204ENST00000431640 ATP5C1P36542 298 aaKnown RBP12.97□□□□□ -0.33
DDX56-204ENST00000431640 SERPINH1P50454 418 aaKnown RBP12.97□□□□□ -0.33
DDX56-204ENST00000431640 CSRP3P50461 194 aa12.97□□□□□ -0.33
DDX56-204ENST00000431640 HK2P52789 917 aa12.97□□□□□ -0.33
DDX56-204ENST00000431640 ASPHQ12797 758 aa12.97□□□□□ -0.33
DDX56-204ENST00000431640 GRM3Q14832 879 aa12.97□□□□□ -0.33
DDX56-204ENST00000431640 USP41Q3LFD5 358 aa12.97□□□□□ -0.33
DDX56-204ENST00000431640 C5orf22Q49AR2 442 aa12.97□□□□□ -0.33
DDX56-204ENST00000431640 ALFQ53S48 1182 aa12.97□□□□□ -0.33
DDX56-204ENST00000431640 CES4AQ5XG92 561 aa12.97□□□□□ -0.33
DDX56-204ENST00000431640 RAP1GAP2Q684P5 730 aa12.97□□□□□ -0.33
DDX56-204ENST00000431640 ESRP1Q6NXG1 681 aaKnown RBP12.97□□□□□ -0.33
DDX56-204ENST00000431640 ZCCHC23Q6ZST2 131 aa12.97□□□□□ -0.33
DDX56-204ENST00000431640 LMNTD2Q8IXW0 634 aa12.97□□□□□ -0.33
DDX56-204ENST00000431640 ARHGAP24Q8N264 748 aa12.97□□□□□ -0.33
DDX56-204ENST00000431640 TTC9BQ8N6N2 239 aa12.97□□□□□ -0.33
DDX56-204ENST00000431640 FBXO22Q8NEZ5 403 aa12.97□□□□□ -0.33
DDX56-204ENST00000431640 GPR152Q8TDT2 470 aa12.97□□□□□ -0.33
DDX56-204ENST00000431640 AZIN2Q96A70 460 aa12.97□□□□□ -0.33
DDX56-204ENST00000431640 ZNF599Q96NL3 588 aa12.97□□□□□ -0.33
DDX56-204ENST00000431640 RPRD1AQ96P16 312 aaPredicted RBP12.97□□□□□ -0.33
DDX56-204ENST00000431640 C20orf27Q9GZN8 174 aa12.97□□□□□ -0.33
DDX56-204ENST00000431640 ZBP1Q9H171 429 aa12.97□□□□□ -0.33
DDX56-204ENST00000431640 ATP13A1Q9HD20 1204 aa12.97□□□□□ -0.33
DDX56-204ENST00000431640 NT5MQ9NPB1 228 aa12.97□□□□□ -0.33
DDX56-204ENST00000431640 FBXO6Q9NRD1 293 aaPredicted RBP12.97□□□□□ -0.33
DDX56-204ENST00000431640 TREX1Q9NSU2 369 aa12.97□□□□□ -0.33
DDX56-204ENST00000431640 ARL8BQ9NVJ2 186 aa12.97□□□□□ -0.33
DDX56-204ENST00000431640 SDAD1Q9NVU7 687 aaKnown RBP eCLIP12.97□□□□□ -0.332e-10■□□□□ 9.7
DDX56-204ENST00000431640 DNAJC28Q9NX36 388 aa12.97□□□□□ -0.33
DDX56-204ENST00000431640 HSFX1Q9UBD0 423 aa12.97□□□□□ -0.33
DDX56-204ENST00000431640 DNMT3LQ9UJW3 386 aa12.97□□□□□ -0.33
DDX56-204ENST00000431640 DNAJC16Q9Y2G8 782 aa12.97□□□□□ -0.33
DDX56-204ENST00000431640 ACOT9Q9Y305 439 aa12.97□□□□□ -0.33
DDX56-204ENST00000431640 BACE2Q9Y5Z0 518 aa12.97□□□□□ -0.33
DDX56-204ENST00000431640 SZT2Q5T011 3432 aa12.96□□□□□ -0.33
DDX56-204ENST00000431640 EPOPA6NHQ4 379 aa12.96□□□□□ -0.33
DDX56-204ENST00000431640 F5H5T6 163 aa12.96□□□□□ -0.33
DDX56-204ENST00000431640 GYG2O15488 501 aa12.96□□□□□ -0.33
DDX56-204ENST00000431640 TLR5O60602 858 aa12.96□□□□□ -0.33
DDX56-204ENST00000431640 CNTN5O94779 1100 aa12.96□□□□□ -0.33
DDX56-204ENST00000431640 SNUPNO95149 360 aaKnown RBP12.96□□□□□ -0.33
DDX56-204ENST00000431640 CSPG5O95196 566 aa12.96□□□□□ -0.33
DDX56-204ENST00000431640 TACR2P21452 398 aa12.96□□□□□ -0.33
DDX56-204ENST00000431640 OR1E1P30953 314 aa12.96□□□□□ -0.33
DDX56-204ENST00000431640 BMPR1AP36894 532 aa12.96□□□□□ -0.33
DDX56-204ENST00000431640 KPNA2P52292 529 aaKnown RBP12.96□□□□□ -0.33
DDX56-204ENST00000431640 SERINC3Q13530 473 aa12.96□□□□□ -0.33
DDX56-204ENST00000431640 CAMK1Q14012 370 aa12.96□□□□□ -0.33
DDX56-204ENST00000431640 TSNAXIP1Q2TAA8 658 aa12.96□□□□□ -0.33
DDX56-204ENST00000431640 SNX30Q5VWJ9 437 aa12.96□□□□□ -0.33
DDX56-204ENST00000431640 SLC8B1Q6J4K2 584 aa12.96□□□□□ -0.33
DDX56-204ENST00000431640 CHRDL2Q6WN34 429 aa12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms