RNA–Protein interactions for RNA: ENST00000430547.5

NUP50-208, Transcript of nucleoporin 50, humanhuman

TSL 4

Gene NUP50, Length 537 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-208ENST00000430547 CALN1Q9BXU9 219 aa17.84■□□□□ 0.45
NUP50-208ENST00000430547 SLC17A9Q9BYT1 436 aa17.84■□□□□ 0.45
NUP50-208ENST00000430547 THAP2Q9H0W7 228 aa17.84■□□□□ 0.45
NUP50-208ENST00000430547 LRRC19Q9H756 370 aa17.84■□□□□ 0.45
NUP50-208ENST00000430547 ZFR2Q9UPR6 939 aaKnown RBP17.84■□□□□ 0.45
NUP50-208ENST00000430547 ERCC2P18074 760 aa17.83■□□□□ 0.44
NUP50-208ENST00000430547 XPAP23025 273 aaPredicted RBP17.83■□□□□ 0.44
NUP50-208ENST00000430547 ARL4AP40617 200 aa17.83■□□□□ 0.44
NUP50-208ENST00000430547 SGCGQ13326 291 aa17.83■□□□□ 0.44
NUP50-208ENST00000430547 TMEM259Q4ZIN3 620 aa17.83■□□□□ 0.44
NUP50-208ENST00000430547 SPATS2Q86XZ4 545 aaKnown RBP17.83■□□□□ 0.44
NUP50-208ENST00000430547 FAM174AQ8TBP5 190 aa17.83■□□□□ 0.44
NUP50-208ENST00000430547 SAP25Q8TEE9 199 aa17.83■□□□□ 0.44
NUP50-208ENST00000430547 EXOC2Q96KP1 924 aa17.83■□□□□ 0.44
NUP50-208ENST00000430547 NUP85Q9BW27 656 aa17.83■□□□□ 0.44
NUP50-208ENST00000430547 TSPY26PQ9H489 355 aa17.83■□□□□ 0.44
NUP50-208ENST00000430547 SP110Q9HB58 689 aa17.83■□□□□ 0.44
NUP50-208ENST00000430547 ANAPC7Q9UJX3 599 aa17.83■□□□□ 0.44
NUP50-208ENST00000430547 MSRB2Q9Y3D2 182 aa17.83■□□□□ 0.44
NUP50-208ENST00000430547 EPG5Q9HCE0 2579 aa17.83■□□□□ 0.44
NUP50-208ENST00000430547 SHROOM3Q8TF72 1996 aa17.82■□□□□ 0.44
NUP50-208ENST00000430547 A0A087X0T9 212 aa17.82■□□□□ 0.44
NUP50-208ENST00000430547 A6NNZ2 444 aa17.82■□□□□ 0.44
NUP50-208ENST00000430547 C1QTNF9BB2RNN3 333 aa17.82■□□□□ 0.44
NUP50-208ENST00000430547 H3BRJ5 948 aa17.82■□□□□ 0.44
NUP50-208ENST00000430547 DFFAO00273 331 aa17.82■□□□□ 0.44
NUP50-208ENST00000430547 TPM1P09493 284 aa17.82■□□□□ 0.44
NUP50-208ENST00000430547 ATXN1LP0C7T5 689 aaKnown RBP17.82■□□□□ 0.44
NUP50-208ENST00000430547 C1QTNF9P0C862 333 aa17.82■□□□□ 0.44
NUP50-208ENST00000430547 FAM228BP0C875 321 aa17.82■□□□□ 0.44
NUP50-208ENST00000430547 ABL2P42684 1182 aa17.82■□□□□ 0.44
NUP50-208ENST00000430547 RXRGP48443 463 aa17.82■□□□□ 0.44
NUP50-208ENST00000430547 PAPOLAP51003 745 aaKnown RBP17.82■□□□□ 0.44
NUP50-208ENST00000430547 TRIM14Q14142 442 aa17.82■□□□□ 0.44
NUP50-208ENST00000430547 GRM3Q14832 879 aa17.82■□□□□ 0.44
NUP50-208ENST00000430547 SHBQ15464 509 aa17.82■□□□□ 0.44
NUP50-208ENST00000430547 SMTNL2Q2TAL5 461 aa17.82■□□□□ 0.44
NUP50-208ENST00000430547 BOLA3Q53S33 107 aa17.82■□□□□ 0.44
NUP50-208ENST00000430547 CCDC157Q569K6 752 aa17.82■□□□□ 0.44
NUP50-208ENST00000430547 CCDC122Q5T0U0 273 aa17.82■□□□□ 0.44
NUP50-208ENST00000430547 CFAP58Q5T655 872 aa17.82■□□□□ 0.44
NUP50-208ENST00000430547 ALKBH5Q6P6C2 394 aaKnown RBP17.82■□□□□ 0.44
NUP50-208ENST00000430547 PTAR1Q7Z6K3 402 aaPredicted RBP17.82■□□□□ 0.44
NUP50-208ENST00000430547 TTC7BQ86TV6 843 aa17.82■□□□□ 0.44
NUP50-208ENST00000430547 SLCO6A1Q86UG4 719 aa17.82■□□□□ 0.44
NUP50-208ENST00000430547 NETO2Q8NC67 525 aa17.82■□□□□ 0.44
NUP50-208ENST00000430547 HSPH1Q92598 858 aa17.82■□□□□ 0.44
NUP50-208ENST00000430547 SLC39A8Q9C0K1 460 aa17.82■□□□□ 0.44
NUP50-208ENST00000430547 LHX3Q9UBR4 397 aa17.82■□□□□ 0.44
NUP50-208ENST00000430547 IP6K2Q9UHH9 426 aa17.82■□□□□ 0.44
NUP50-208ENST00000430547 J3KR12 359 aa17.81■□□□□ 0.44
NUP50-208ENST00000430547 PRAMEF11O60813 436 aa17.81■□□□□ 0.44
NUP50-208ENST00000430547 PALMO75781 387 aa17.81■□□□□ 0.44
NUP50-208ENST00000430547 PAK4O96013 591 aaPredicted RBP17.81■□□□□ 0.44
NUP50-208ENST00000430547 PROS1P07225 676 aa17.81■□□□□ 0.44
NUP50-208ENST00000430547 SSR1P43307 286 aaKnown RBP17.81■□□□□ 0.44
NUP50-208ENST00000430547 HCAR3P49019 387 aa17.81■□□□□ 0.44
NUP50-208ENST00000430547 CLDN2P57739 230 aa17.81■□□□□ 0.44
NUP50-208ENST00000430547 TSR1Q2NL82 804 aaKnown RBP17.81■□□□□ 0.44
NUP50-208ENST00000430547 SPECC1LQ69YQ0 1117 aa17.81■□□□□ 0.44
NUP50-208ENST00000430547 GCNT7Q6ZNI0 430 aa17.81■□□□□ 0.44
NUP50-208ENST00000430547 CYP4V2Q6ZWL3 525 aaPredicted RBP17.81■□□□□ 0.44
NUP50-208ENST00000430547 LZTR1Q8N653 840 aa17.81■□□□□ 0.44
NUP50-208ENST00000430547 EID2Q8N6I1 236 aa17.81■□□□□ 0.44
NUP50-208ENST00000430547 PAF1Q8N7H5 531 aa17.81■□□□□ 0.44
NUP50-208ENST00000430547 OR13H1Q8NG92 308 aa17.81■□□□□ 0.44
NUP50-208ENST00000430547 CNDP2Q96KP4 475 aaKnown RBP17.81■□□□□ 0.44
NUP50-208ENST00000430547 DEF6Q9H4E7 631 aa17.81■□□□□ 0.44
NUP50-208ENST00000430547 PDFQ9HBH1 243 aa17.81■□□□□ 0.44
NUP50-208ENST00000430547 STAU2Q9NUL3 570 aaKnown RBP eCLIP17.81■□□□□ 0.44
NUP50-208ENST00000430547 ZNHIT6Q9NWK9 470 aaKnown RBP17.81■□□□□ 0.44
NUP50-208ENST00000430547 CWC15Q9P013 229 aaKnown RBP17.81■□□□□ 0.44
NUP50-208ENST00000430547 ITM2BQ9Y287 266 aa17.81■□□□□ 0.44
NUP50-208ENST00000430547 MFHAS1Q9Y4C4 1052 aa17.81■□□□□ 0.44
NUP50-208ENST00000430547 FRYQ5TBA9 3013 aa17.81■□□□□ 0.44
NUP50-208ENST00000430547 CACNA1BQ00975 2339 aa17.8■□□□□ 0.44
NUP50-208ENST00000430547 TMEM8BA6NDV4 472 aa17.8■□□□□ 0.44
NUP50-208ENST00000430547 IGLON5A6NGN9 336 aa17.8■□□□□ 0.44
NUP50-208ENST00000430547 MYO1FO00160 1098 aa17.8■□□□□ 0.44
NUP50-208ENST00000430547 FPGTO14772 594 aa17.8■□□□□ 0.44
NUP50-208ENST00000430547 SDC3O75056 442 aa17.8■□□□□ 0.44
NUP50-208ENST00000430547 LDOC1O95751 146 aaPredicted RBP17.8■□□□□ 0.44
NUP50-208ENST00000430547 BNIP3Q12983 259 aa17.8■□□□□ 0.44
NUP50-208ENST00000430547 CYTH1Q15438 398 aa17.8■□□□□ 0.44
NUP50-208ENST00000430547 DPYSL2Q16555 572 aa17.8■□□□□ 0.44
NUP50-208ENST00000430547 HS1BP3Q53T59 392 aa17.8■□□□□ 0.44
NUP50-208ENST00000430547 LRRC73Q5JTD7 316 aa17.8■□□□□ 0.44
NUP50-208ENST00000430547 TMCO3Q6UWJ1 677 aa17.8■□□□□ 0.44
NUP50-208ENST00000430547 ABI3BPQ7Z7G0 1075 aa17.8■□□□□ 0.44
NUP50-208ENST00000430547 DCP2Q8IU60 420 aaKnown RBP17.8■□□□□ 0.44
NUP50-208ENST00000430547 NIPA2Q8N8Q9 360 aa17.8■□□□□ 0.44
NUP50-208ENST00000430547 CXorf40AQ8TE69 158 aa17.8■□□□□ 0.44
NUP50-208ENST00000430547 CINPQ9BW66 212 aaPredicted RBP17.8■□□□□ 0.44
NUP50-208ENST00000430547 C1QTNF7Q9BXJ2 289 aa17.8■□□□□ 0.44
NUP50-208ENST00000430547 CPEB1Q9BZB8 566 aaKnown RBP17.8■□□□□ 0.44
NUP50-208ENST00000430547 TOR4AQ9NXH8 423 aa17.8■□□□□ 0.44
NUP50-208ENST00000430547 DKK3Q9UBP4 350 aa17.8■□□□□ 0.44
NUP50-208ENST00000430547 GGT7Q9UJ14 662 aa17.8■□□□□ 0.44
NUP50-208ENST00000430547 HS3ST3A1Q9Y663 406 aa17.8■□□□□ 0.44
NUP50-208ENST00000430547 LRRK1Q38SD2 2015 aa17.8■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms