RNA–Protein interactions for RNA: ENST00000428626.5

SEC13-210, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 3

Gene SEC13, Length 567 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-210ENST00000428626 CKMT1AP12532 417 aa15.75■□□□□ 0.11
SEC13-210ENST00000428626 ATP1A3P13637 1013 aa15.75■□□□□ 0.11
SEC13-210ENST00000428626 NME1P15531 152 aaKnown RBP15.75■□□□□ 0.11
SEC13-210ENST00000428626 ETFBP38117 255 aa15.75■□□□□ 0.11
SEC13-210ENST00000428626 EIF2S3P41091 472 aaKnown RBP15.75■□□□□ 0.11
SEC13-210ENST00000428626 DAB2P98082 770 aa15.75■□□□□ 0.11
SEC13-210ENST00000428626 MYL5Q02045 173 aa15.75■□□□□ 0.11
SEC13-210ENST00000428626 C1QBPQ07021 282 aaKnown RBP15.75■□□□□ 0.11
SEC13-210ENST00000428626 EIF2B5Q13144 721 aaKnown RBP15.75■□□□□ 0.11
SEC13-210ENST00000428626 CDCP2Q5VXM1 449 aa15.75■□□□□ 0.11
SEC13-210ENST00000428626 SLFN11Q7Z7L1 901 aa15.75■□□□□ 0.11
SEC13-210ENST00000428626 CACTIN-AS1Q8N1I8 211 aa15.75■□□□□ 0.11
SEC13-210ENST00000428626 RTL3Q8N8U3 475 aaKnown RBP15.75■□□□□ 0.11
SEC13-210ENST00000428626 ZNF548Q8NEK5 533 aaPredicted RBP15.75■□□□□ 0.11
SEC13-210ENST00000428626 NEK11Q8NG66 645 aa15.75■□□□□ 0.11
SEC13-210ENST00000428626 HMCESQ96FZ2 354 aa15.75■□□□□ 0.11
SEC13-210ENST00000428626 MCEEQ96PE7 176 aa15.75■□□□□ 0.11
SEC13-210ENST00000428626 LENG8Q96PV6 779 aaPredicted RBP15.75■□□□□ 0.11
SEC13-210ENST00000428626 AGPAT1Q99943 283 aa15.75■□□□□ 0.11
SEC13-210ENST00000428626 SYT11Q9BT88 431 aa15.75■□□□□ 0.11
SEC13-210ENST00000428626 TCEAL2Q9H3H9 227 aaPredicted RBP15.75■□□□□ 0.11
SEC13-210ENST00000428626 RETREG1Q9H6L5 497 aa15.75■□□□□ 0.11
SEC13-210ENST00000428626 TAS2R14Q9NYV8 317 aa15.75■□□□□ 0.11
SEC13-210ENST00000428626 NLGN3Q9NZ94 848 aa15.75■□□□□ 0.11
SEC13-210ENST00000428626 FZD10Q9ULW2 581 aa15.75■□□□□ 0.11
SEC13-210ENST00000428626 DAAM1Q9Y4D1 1078 aa15.75■□□□□ 0.11
SEC13-210ENST00000428626 AK5Q9Y6K8 562 aa15.75■□□□□ 0.11
SEC13-210ENST00000428626 CASC3O15234 703 aaKnown RBP15.74■□□□□ 0.11
SEC13-210ENST00000428626 TSPAN6O43657 245 aa15.74■□□□□ 0.11
SEC13-210ENST00000428626 BUB1O43683 1085 aa15.74■□□□□ 0.11
SEC13-210ENST00000428626 BRINP1O60477 761 aa15.74■□□□□ 0.11
SEC13-210ENST00000428626 POP4O95707 220 aaKnown RBP15.74■□□□□ 0.11
SEC13-210ENST00000428626 CALB1P05937 261 aa15.74■□□□□ 0.11
SEC13-210ENST00000428626 EPHB2P29323 1055 aa15.74■□□□□ 0.11
SEC13-210ENST00000428626 IGFALSP35858 605 aa15.74■□□□□ 0.11
SEC13-210ENST00000428626 ZNF143P52747 638 aaPredicted RBP15.74■□□□□ 0.11
SEC13-210ENST00000428626 PFN3P60673 137 aa15.74■□□□□ 0.11
SEC13-210ENST00000428626 SNRPD1P62314 119 aaKnown RBP15.74■□□□□ 0.11
SEC13-210ENST00000428626 UBXN1Q04323 297 aa15.74■□□□□ 0.11
SEC13-210ENST00000428626 PDE1CQ14123 709 aaPredicted RBP15.74■□□□□ 0.11
SEC13-210ENST00000428626 SCYL2Q6P3W7 929 aa15.74■□□□□ 0.11
SEC13-210ENST00000428626 DNAAF5Q86Y56 855 aa15.74■□□□□ 0.11
SEC13-210ENST00000428626 DCP2Q8IU60 420 aaKnown RBP15.74■□□□□ 0.11
SEC13-210ENST00000428626 RBFAQ8N0V3 343 aa15.74■□□□□ 0.11
SEC13-210ENST00000428626 CENPTQ96BT3 561 aa15.74■□□□□ 0.11
SEC13-210ENST00000428626 PCMTD1Q96MG8 357 aaPredicted RBP15.74■□□□□ 0.11
SEC13-210ENST00000428626 SEPT11Q9NVA2 429 aaKnown RBP15.74■□□□□ 0.11
SEC13-210ENST00000428626 LHX3Q9UBR4 397 aa15.74■□□□□ 0.11
SEC13-210ENST00000428626 RAI2Q9Y5P3 530 aa15.74■□□□□ 0.11
SEC13-210ENST00000428626 RASA4BC9J798 803 aa15.73■□□□□ 0.11
SEC13-210ENST00000428626 RASA4O43374 803 aa15.73■□□□□ 0.11
SEC13-210ENST00000428626 CREB3O43889 395 aa15.73■□□□□ 0.11
SEC13-210ENST00000428626 OPA1O60313 960 aa15.73■□□□□ 0.11
SEC13-210ENST00000428626 MMP20O60882 483 aa15.73■□□□□ 0.11
SEC13-210ENST00000428626 TPM2P07951 284 aa15.73■□□□□ 0.11
SEC13-210ENST00000428626 TIMP2P16035 220 aa15.73■□□□□ 0.11
SEC13-210ENST00000428626 RABIFP47224 123 aa15.73■□□□□ 0.11
SEC13-210ENST00000428626 GEMIN4P57678 1058 aaKnown RBP15.73■□□□□ 0.11
SEC13-210ENST00000428626 HNRNPKP61978 463 aaKnown RBP eCLIP15.73■□□□□ 0.11
SEC13-210ENST00000428626 E2F1Q01094 437 aa15.73■□□□□ 0.11
SEC13-210ENST00000428626 SGCGQ13326 291 aa15.73■□□□□ 0.11
SEC13-210ENST00000428626 CYTH1Q15438 398 aa15.73■□□□□ 0.11
SEC13-210ENST00000428626 DNAJC24Q6P3W2 148 aa15.73■□□□□ 0.11
SEC13-210ENST00000428626 GDPD4Q6W3E5 623 aa15.73■□□□□ 0.11
SEC13-210ENST00000428626 NYAP1Q6ZVC0 841 aa15.73■□□□□ 0.11
SEC13-210ENST00000428626 IRF2BP2Q7Z5L9 587 aa15.73■□□□□ 0.11
SEC13-210ENST00000428626 PARGQ86W56 976 aa15.73■□□□□ 0.11
SEC13-210ENST00000428626 MCOLN2Q8IZK6 566 aa15.73■□□□□ 0.11
SEC13-210ENST00000428626 ARFGAP1Q8N6T3 406 aa15.73■□□□□ 0.11
SEC13-210ENST00000428626 FAM181AQ8N9Y4 354 aa15.73■□□□□ 0.11
SEC13-210ENST00000428626 FAM174AQ8TBP5 190 aa15.73■□□□□ 0.11
SEC13-210ENST00000428626 ASB12Q8WXK4 309 aa15.73■□□□□ 0.11
SEC13-210ENST00000428626 RAB7BQ96AH8 199 aa15.73■□□□□ 0.11
SEC13-210ENST00000428626 EXOC2Q96KP1 924 aa15.73■□□□□ 0.11
SEC13-210ENST00000428626 TTYH3Q9C0H2 523 aa15.73■□□□□ 0.11
SEC13-210ENST00000428626 MBNL1Q9NR56 388 aaKnown RBP15.73■□□□□ 0.11
SEC13-210ENST00000428626 GPATCH2LQ9NWQ4 482 aa15.73■□□□□ 0.11
SEC13-210ENST00000428626 HPCAL4Q9UM19 191 aa15.73■□□□□ 0.11
SEC13-210ENST00000428626 MGAQ8IWI9 3026 aa15.72■□□□□ 0.11
SEC13-210ENST00000428626 WASH4PA8MWX3 477 aa15.72■□□□□ 0.11
SEC13-210ENST00000428626 NEMP1O14524 444 aa15.72■□□□□ 0.11
SEC13-210ENST00000428626 FPGTO14772 594 aa15.72■□□□□ 0.11
SEC13-210ENST00000428626 TEX33O43247 280 aa15.72■□□□□ 0.11
SEC13-210ENST00000428626 GCATO75600 419 aa15.72■□□□□ 0.11
SEC13-210ENST00000428626 ABCG1P45844 678 aa15.72■□□□□ 0.11
SEC13-210ENST00000428626 SERINC3Q13530 473 aa15.72■□□□□ 0.11
SEC13-210ENST00000428626 STX1AQ16623 288 aa15.72■□□□□ 0.11
SEC13-210ENST00000428626 CA9Q16790 459 aa15.72■□□□□ 0.11
SEC13-210ENST00000428626 EFHC2Q5JST6 749 aa15.72■□□□□ 0.11
SEC13-210ENST00000428626 TTC7BQ86TV6 843 aa15.72■□□□□ 0.11
SEC13-210ENST00000428626 VPS36Q86VN1 386 aa15.72■□□□□ 0.11
SEC13-210ENST00000428626 ZNF354CQ86Y25 554 aa15.72■□□□□ 0.11
SEC13-210ENST00000428626 UMODL1-AS1Q8N2C9 162 aa15.72■□□□□ 0.11
SEC13-210ENST00000428626 DENND6BQ8NEG7 585 aa15.72■□□□□ 0.11
SEC13-210ENST00000428626 SNIP1Q8TAD8 396 aaKnown RBP15.72■□□□□ 0.11
SEC13-210ENST00000428626 GDAP1L1Q96MZ0 367 aa15.72■□□□□ 0.11
SEC13-210ENST00000428626 CNPY3Q9BT09 278 aa15.72■□□□□ 0.11
SEC13-210ENST00000428626 ANO10Q9NW15 660 aa15.72■□□□□ 0.11
SEC13-210ENST00000428626 MFHAS1Q9Y4C4 1052 aa15.72■□□□□ 0.11
SEC13-210ENST00000428626 SHROOM3Q8TF72 1996 aa15.72■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms