RNA–Protein interactions for RNA: ENST00000424846.3

TPM3P9-201, Transcript of tropomyosin 3 pseudogene 9, humanhuman

TSL 1 (best) BASIC

Gene TPM3P9, Length 2,920 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3P9-201ENST00000424846 GTF3C5Q9Y5Q8 519 aaPredicted RBP14.35□□□□□ -0.11
TPM3P9-201ENST00000424846 NRCAMQ92823 1304 aa14.35□□□□□ -0.11
TPM3P9-201ENST00000424846 PDCD11Q14690 1871 aaKnown RBP14.35□□□□□ -0.11
TPM3P9-201ENST00000424846 ATP6AP2A0A1C7CYW4 349 aa14.35□□□□□ -0.11
TPM3P9-201ENST00000424846 TADA2AO75478 443 aa14.35□□□□□ -0.11
TPM3P9-201ENST00000424846 ATP6AP2O75787 350 aa14.35□□□□□ -0.11
TPM3P9-201ENST00000424846 SNAI1O95863 264 aaPredicted RBP14.35□□□□□ -0.11
TPM3P9-201ENST00000424846 CDK4P11802 303 aa14.35□□□□□ -0.11
TPM3P9-201ENST00000424846 ARCN1P48444 511 aaKnown RBP14.35□□□□□ -0.11
TPM3P9-201ENST00000424846 CDH15P55291 814 aa14.35□□□□□ -0.11
TPM3P9-201ENST00000424846 CDH17Q12864 832 aa14.35□□□□□ -0.11
TPM3P9-201ENST00000424846 MAP7Q14244 749 aa14.35□□□□□ -0.11
TPM3P9-201ENST00000424846 HMBOX1Q6NT76 420 aa14.35□□□□□ -0.11
TPM3P9-201ENST00000424846 TRIM67Q6ZTA4 783 aa14.35□□□□□ -0.11
TPM3P9-201ENST00000424846 NUP93Q8N1F7 819 aa14.35□□□□□ -0.11
TPM3P9-201ENST00000424846 PELI3Q8N2H9 469 aa14.35□□□□□ -0.11
TPM3P9-201ENST00000424846 LPGAT1Q92604 370 aa14.35□□□□□ -0.11
TPM3P9-201ENST00000424846 ELMO2Q96JJ3 720 aa14.35□□□□□ -0.11
TPM3P9-201ENST00000424846 TNIP3Q96KP6 325 aa14.35□□□□□ -0.11
TPM3P9-201ENST00000424846 CIB1Q99828 191 aa14.35□□□□□ -0.11
TPM3P9-201ENST00000424846 COLEC11Q9BWP8 271 aa14.35□□□□□ -0.11
TPM3P9-201ENST00000424846 Q9H521 79 aa14.35□□□□□ -0.11
TPM3P9-201ENST00000424846 FBRSL1Q9HCM7 1045 aaKnown RBP14.35□□□□□ -0.11
TPM3P9-201ENST00000424846 EPS15L1Q9UBC2 864 aa14.35□□□□□ -0.11
TPM3P9-201ENST00000424846 SFMBT1Q9UHJ3 866 aa14.35□□□□□ -0.11
TPM3P9-201ENST00000424846 CEPT1Q9Y6K0 416 aa14.35□□□□□ -0.11
TPM3P9-201ENST00000424846 ASB14A6NK59 587 aa14.34□□□□□ -0.11
TPM3P9-201ENST00000424846 DDNO94850 711 aaPredicted RBP14.34□□□□□ -0.11
TPM3P9-201ENST00000424846 CKMT2P17540 419 aa14.34□□□□□ -0.11
TPM3P9-201ENST00000424846 YWHAQP27348 245 aa14.34□□□□□ -0.11
TPM3P9-201ENST00000424846 RAB10P61026 200 aa14.34□□□□□ -0.11
TPM3P9-201ENST00000424846 FRG1Q14331 258 aaKnown RBP14.34□□□□□ -0.11
TPM3P9-201ENST00000424846 CSHL1Q14406 222 aa14.34□□□□□ -0.11
TPM3P9-201ENST00000424846 UBXN11Q5T124 520 aa14.34□□□□□ -0.11
TPM3P9-201ENST00000424846 BHLHA9Q7RTU4 235 aa14.34□□□□□ -0.11
TPM3P9-201ENST00000424846 SPPL2BQ8TCT7 592 aa14.34□□□□□ -0.11
TPM3P9-201ENST00000424846 LRCH3Q96II8 777 aa14.34□□□□□ -0.11
TPM3P9-201ENST00000424846 MAELQ96JY0 434 aaKnown RBP14.34□□□□□ -0.11
TPM3P9-201ENST00000424846 NDFIP2Q9NV92 336 aa14.34□□□□□ -0.11
TPM3P9-201ENST00000424846 COL1A2P08123 1366 aa14.34□□□□□ -0.11
TPM3P9-201ENST00000424846 C9JVG2 144 aa14.34□□□□□ -0.11
TPM3P9-201ENST00000424846 DFFAO00273 331 aa14.34□□□□□ -0.11
TPM3P9-201ENST00000424846 TRIM38O00635 465 aa14.34□□□□□ -0.11
TPM3P9-201ENST00000424846 MMP3P08254 477 aa14.34□□□□□ -0.11
TPM3P9-201ENST00000424846 RDH11Q8TC12 318 aa14.34□□□□□ -0.11
TPM3P9-201ENST00000424846 DNAJB3Q8WWF6 145 aa14.34□□□□□ -0.11
TPM3P9-201ENST00000424846 OLFM1Q99784 485 aa14.34□□□□□ -0.11
TPM3P9-201ENST00000424846 FICDQ9BVA6 458 aa14.34□□□□□ -0.11
TPM3P9-201ENST00000424846 SIK2Q9H0K1 926 aa14.34□□□□□ -0.11
TPM3P9-201ENST00000424846 CDKN2AIPQ9NXV6 580 aaPredicted RBP14.34□□□□□ -0.11
TPM3P9-201ENST00000424846 GALNT8Q9NY28 637 aa14.34□□□□□ -0.11
TPM3P9-201ENST00000424846 CACNA2D2Q9NY47 1150 aa14.34□□□□□ -0.11
TPM3P9-201ENST00000424846 NDUFA13Q9P0J0 144 aa14.34□□□□□ -0.11
TPM3P9-201ENST00000424846 SNX13Q9Y5W8 968 aa14.34□□□□□ -0.11
TPM3P9-201ENST00000424846 APOA4P06727 396 aa14.33□□□□□ -0.12
TPM3P9-201ENST00000424846 DARSP14868 501 aaKnown RBP14.33□□□□□ -0.12
TPM3P9-201ENST00000424846 LRP8Q14114 963 aa14.33□□□□□ -0.12
TPM3P9-201ENST00000424846 IKBKEQ14164 716 aa14.33□□□□□ -0.12
TPM3P9-201ENST00000424846 HERC3Q15034 1050 aa14.33□□□□□ -0.12
TPM3P9-201ENST00000424846 ZNF792Q3KQV3 632 aa14.33□□□□□ -0.12
TPM3P9-201ENST00000424846 AGKQ53H12 422 aa14.33□□□□□ -0.12
TPM3P9-201ENST00000424846 PKN3Q6P5Z2 889 aa14.33□□□□□ -0.12
TPM3P9-201ENST00000424846 CYHR1Q6ZMK1 362 aa14.33□□□□□ -0.12
TPM3P9-201ENST00000424846 PHF21BQ96EK2 531 aa14.33□□□□□ -0.12
TPM3P9-201ENST00000424846 TSNARE1Q96NA8 513 aa14.33□□□□□ -0.12
TPM3P9-201ENST00000424846 VTI1BQ9UEU0 232 aa14.33□□□□□ -0.12
TPM3P9-201ENST00000424846 GIMAP2Q9UG22 337 aa14.33□□□□□ -0.12
TPM3P9-201ENST00000424846 ANKRD6Q9Y2G4 727 aa14.33□□□□□ -0.12
TPM3P9-201ENST00000424846 AP4S1Q9Y587 144 aa14.33□□□□□ -0.12
TPM3P9-201ENST00000424846 TTC3P53804 2025 aa14.33□□□□□ -0.12
TPM3P9-201ENST00000424846 CCL22O00626 93 aa14.33□□□□□ -0.12
TPM3P9-201ENST00000424846 PTGESO14684 152 aa14.33□□□□□ -0.12
TPM3P9-201ENST00000424846 PMPCBO75439 489 aa14.33□□□□□ -0.12
TPM3P9-201ENST00000424846 STMN1P16949 149 aa14.33□□□□□ -0.12
TPM3P9-201ENST00000424846 PSMC3P17980 439 aa14.33□□□□□ -0.12
TPM3P9-201ENST00000424846 CDH2P19022 906 aaPredicted RBP14.33□□□□□ -0.12
TPM3P9-201ENST00000424846 UGT1A6P19224 532 aa14.33□□□□□ -0.12
TPM3P9-201ENST00000424846 TRIM25Q14258 630 aaKnown RBP14.33□□□□□ -0.12
TPM3P9-201ENST00000424846 USP41Q3LFD5 358 aa14.33□□□□□ -0.12
TPM3P9-201ENST00000424846 REP15Q6BDI9 236 aa14.33□□□□□ -0.12
TPM3P9-201ENST00000424846 ZNF470Q6ECI4 717 aa14.33□□□□□ -0.12
TPM3P9-201ENST00000424846 CLEC6AQ6EIG7 209 aa14.33□□□□□ -0.12
TPM3P9-201ENST00000424846 RWDD4Q6NW29 188 aaKnown RBP14.33□□□□□ -0.12
TPM3P9-201ENST00000424846 ERO1BQ86YB8 467 aa14.33□□□□□ -0.12
TPM3P9-201ENST00000424846 NTAN1Q96AB6 310 aa14.33□□□□□ -0.12
TPM3P9-201ENST00000424846 PCED1BQ96HM7 432 aa14.33□□□□□ -0.12
TPM3P9-201ENST00000424846 ZNF560Q96MR9 790 aa14.33□□□□□ -0.12
TPM3P9-201ENST00000424846 MROH8Q9H579 483 aa14.33□□□□□ -0.12
TPM3P9-201ENST00000424846 NOL11Q9H8H0 719 aaKnown RBP14.33□□□□□ -0.12
TPM3P9-201ENST00000424846 MAGEB16A2A368 324 aa14.32□□□□□ -0.12
TPM3P9-201ENST00000424846 CD4P01730 458 aa14.32□□□□□ -0.12
TPM3P9-201ENST00000424846 FAM200BP0CF97 657 aa14.32□□□□□ -0.12
TPM3P9-201ENST00000424846 WARSP23381 471 aaKnown RBP14.32□□□□□ -0.12
TPM3P9-201ENST00000424846 GJA5P36382 358 aa14.32□□□□□ -0.12
TPM3P9-201ENST00000424846 NME5P56597 212 aa14.32□□□□□ -0.12
TPM3P9-201ENST00000424846 HPCAP84074 193 aa14.32□□□□□ -0.12
TPM3P9-201ENST00000424846 SCAPQ12770 1279 aa14.32□□□□□ -0.12
TPM3P9-201ENST00000424846 RFTN1Q14699 578 aaPredicted RBP14.32□□□□□ -0.12
TPM3P9-201ENST00000424846 C6orf10Q5SRN2 563 aa14.32□□□□□ -0.12
TPM3P9-201ENST00000424846 SETD3Q86TU7 594 aaPredicted RBP14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms