RNA–Protein interactions for RNA: ENST00000423982.6

MSH5-206, Transcript of mutS homolog 5, humanhuman

TSL 5

Gene MSH5, Length 2,706 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-206ENST00000423982 MPP3Q13368 585 aa14.51□□□□□ -0.09
MSH5-206ENST00000423982 LPIN1Q14693 890 aa14.51□□□□□ -0.09
MSH5-206ENST00000423982 ISL2Q96A47 359 aa14.51□□□□□ -0.09
MSH5-206ENST00000423982 FAM149B1Q96BN6 582 aa14.51□□□□□ -0.09
MSH5-206ENST00000423982 TMEM79Q9BSE2 394 aa14.51□□□□□ -0.09
MSH5-206ENST00000423982 ANLNQ9NQW6 1124 aa14.51□□□□□ -0.09
MSH5-206ENST00000423982 RSL24D1Q9UHA3 163 aaKnown RBP14.51□□□□□ -0.09
MSH5-206ENST00000423982 CDYLQ9Y232 598 aa14.51□□□□□ -0.09
MSH5-206ENST00000423982 GTF3C5Q9Y5Q8 519 aaPredicted RBP14.51□□□□□ -0.09
MSH5-206ENST00000423982 SHROOM3Q8TF72 1996 aa14.51□□□□□ -0.09
MSH5-206ENST00000423982 FAM72CH0Y354 149 aa14.5□□□□□ -0.09
MSH5-206ENST00000423982 HNRNPCP07910 306 aaKnown RBP eCLIP14.5□□□□□ -0.09
MSH5-206ENST00000423982 NMBRP28336 390 aa14.5□□□□□ -0.09
MSH5-206ENST00000423982 PTPN9P43378 593 aa14.5□□□□□ -0.09
MSH5-206ENST00000423982 RBP5P82980 135 aa14.5□□□□□ -0.09
MSH5-206ENST00000423982 NAB1Q13506 487 aa14.5□□□□□ -0.09
MSH5-206ENST00000423982 IKBKEQ14164 716 aa14.5□□□□□ -0.09
MSH5-206ENST00000423982 PITRM1Q5JRX3 1037 aa14.5□□□□□ -0.09
MSH5-206ENST00000423982 FAM72AQ5TYM5 149 aa14.5□□□□□ -0.09
MSH5-206ENST00000423982 FAM72DQ6L9T8 149 aa14.5□□□□□ -0.09
MSH5-206ENST00000423982 LPCAT2Q7L5N7 544 aa14.5□□□□□ -0.09
MSH5-206ENST00000423982 KCNMB4Q86W47 210 aa14.5□□□□□ -0.09
MSH5-206ENST00000423982 FAM72BQ86X60 149 aa14.5□□□□□ -0.09
MSH5-206ENST00000423982 DEFB106AQ8N104 65 aa14.5□□□□□ -0.09
MSH5-206ENST00000423982 CATSPER1Q8NEC5 780 aa14.5□□□□□ -0.09
MSH5-206ENST00000423982 RNF139Q8WU17 664 aa14.5□□□□□ -0.09
MSH5-206ENST00000423982 SLCO4A1Q96BD0 722 aa14.5□□□□□ -0.09
MSH5-206ENST00000423982 EFCAB1Q9HAE3 211 aa14.5□□□□□ -0.09
MSH5-206ENST00000423982 RUVBL2Q9Y230 463 aaKnown RBP14.5□□□□□ -0.09
MSH5-206ENST00000423982 ZNF510Q9Y2H8 683 aa14.5□□□□□ -0.09
MSH5-206ENST00000423982 CITO14578 2027 aa14.5□□□□□ -0.09
MSH5-206ENST00000423982 NEMP2A6NFY4 417 aa14.5□□□□□ -0.09
MSH5-206ENST00000423982 C9IYK1 514 aa14.5□□□□□ -0.09
MSH5-206ENST00000423982 M0QZ92 97 aa14.5□□□□□ -0.09
MSH5-206ENST00000423982 ATP6V1G1O75348 118 aa14.5□□□□□ -0.09
MSH5-206ENST00000423982 HNRNPLP14866 589 aaKnown RBP eCLIP14.5□□□□□ -0.098e-8■■■□□ 16.1
MSH5-206ENST00000423982 LMO2P25791 158 aa14.5□□□□□ -0.09
MSH5-206ENST00000423982 CST5P28325 142 aaPredicted RBP14.5□□□□□ -0.09
MSH5-206ENST00000423982 HOXA11P31270 313 aaPredicted RBP14.5□□□□□ -0.09
MSH5-206ENST00000423982 SULT1E1P49888 294 aa14.5□□□□□ -0.09
MSH5-206ENST00000423982 PRMT2P55345 433 aa14.5□□□□□ -0.09
MSH5-206ENST00000423982 PRAMEP78395 509 aa14.5□□□□□ -0.09
MSH5-206ENST00000423982 CTBSQ01459 385 aa14.5□□□□□ -0.09
MSH5-206ENST00000423982 ZNF618Q5T7W0 954 aa14.5□□□□□ -0.09
MSH5-206ENST00000423982 LIPMQ5VYY2 423 aa14.5□□□□□ -0.09
MSH5-206ENST00000423982 ZNF280DQ6N043 979 aa14.5□□□□□ -0.09
MSH5-206ENST00000423982 FSTL5Q8N475 847 aaPredicted RBP14.5□□□□□ -0.09
MSH5-206ENST00000423982 HMGCLL1Q8TB92 370 aa14.5□□□□□ -0.09
MSH5-206ENST00000423982 DDI1Q8WTU0 396 aa14.5□□□□□ -0.09
MSH5-206ENST00000423982 ZMAT2Q96NC0 199 aaKnown RBP14.5□□□□□ -0.09
MSH5-206ENST00000423982 SLC39A3Q9BRY0 314 aa14.5□□□□□ -0.09
MSH5-206ENST00000423982 C1QTNF1Q9BXJ1 281 aa14.5□□□□□ -0.09
MSH5-206ENST00000423982 NOL11Q9H8H0 719 aaKnown RBP14.5□□□□□ -0.09
MSH5-206ENST00000423982 LRRC40Q9H9A6 602 aa14.5□□□□□ -0.09
MSH5-206ENST00000423982 TIMMDC1Q9NPL8 285 aa14.5□□□□□ -0.09
MSH5-206ENST00000423982 EIF2B3Q9NR50 452 aaKnown RBP14.5□□□□□ -0.09
MSH5-206ENST00000423982 TUBGCP4Q9UGJ1 667 aa14.5□□□□□ -0.09
MSH5-206ENST00000423982 FZD10Q9ULW2 581 aa14.5□□□□□ -0.09
MSH5-206ENST00000423982 PCDHGA7Q9Y5G6 932 aa14.5□□□□□ -0.09
MSH5-206ENST00000423982 MT-CO1P00395 513 aa14.5□□□□□ -0.09
MSH5-206ENST00000423982 CHRNA1P02708 482 aa14.5□□□□□ -0.09
MSH5-206ENST00000423982 TFPTP0C1Z6 253 aa14.5□□□□□ -0.09
MSH5-206ENST00000423982 CCDC166P0CW27 439 aa14.5□□□□□ -0.09
MSH5-206ENST00000423982 AKAP5P24588 427 aa14.5□□□□□ -0.09
MSH5-206ENST00000423982 HOXC8P31273 242 aa14.5□□□□□ -0.09
MSH5-206ENST00000423982 ENTPD1P49961 510 aa14.5□□□□□ -0.09
MSH5-206ENST00000423982 NME3Q13232 169 aa14.5□□□□□ -0.09
MSH5-206ENST00000423982 ANKDD1AQ495B1 522 aa14.5□□□□□ -0.09
MSH5-206ENST00000423982 DCAF6Q58WW2 860 aa14.5□□□□□ -0.09
MSH5-206ENST00000423982 TAF2Q6P1X5 1199 aa14.5□□□□□ -0.09
MSH5-206ENST00000423982 TMEM135Q86UB9 458 aa14.5□□□□□ -0.09
MSH5-206ENST00000423982 SERINC5Q86VE9 423 aa14.5□□□□□ -0.09
MSH5-206ENST00000423982 SLC41A1Q8IVJ1 513 aa14.5□□□□□ -0.09
MSH5-206ENST00000423982 CPSF7Q8N684 471 aaKnown RBP14.5□□□□□ -0.09
MSH5-206ENST00000423982 PNPLA1Q8N8W4 532 aa14.5□□□□□ -0.09
MSH5-206ENST00000423982 C18orf25Q96B23 403 aaPredicted RBP14.5□□□□□ -0.09
MSH5-206ENST00000423982 PLEKHG4BQ96PX9 1271 aa14.5□□□□□ -0.09
MSH5-206ENST00000423982 NAT9Q9BTE0 207 aa14.5□□□□□ -0.09
MSH5-206ENST00000423982 DCUN1D5Q9BTE7 237 aa14.5□□□□□ -0.09
MSH5-206ENST00000423982 NFKBIZQ9BYH8 718 aa14.5□□□□□ -0.09
MSH5-206ENST00000423982 NXF3Q9H4D5 531 aaKnown RBP14.5□□□□□ -0.09
MSH5-206ENST00000423982 OLAHQ9NV23 265 aa14.5□□□□□ -0.09
MSH5-206ENST00000423982 EBF1Q9UH73 591 aa14.5□□□□□ -0.09
MSH5-206ENST00000423982 SFMBT1Q9UHJ3 866 aa14.5□□□□□ -0.09
MSH5-206ENST00000423982 VPS28Q9UK41 221 aa14.5□□□□□ -0.09
MSH5-206ENST00000423982 AP4S1Q9Y587 144 aa14.5□□□□□ -0.09
MSH5-206ENST00000423982 ZBTB24O43167 697 aaPredicted RBP14.49□□□□□ -0.09
MSH5-206ENST00000423982 DLX3O60479 287 aa14.49□□□□□ -0.09
MSH5-206ENST00000423982 PQBP1O60828 265 aaKnown RBP14.49□□□□□ -0.09
MSH5-206ENST00000423982 MPOP05164 745 aa14.49□□□□□ -0.09
MSH5-206ENST00000423982 DESP17661 470 aa14.49□□□□□ -0.09
MSH5-206ENST00000423982 PSME3P61289 254 aa14.49□□□□□ -0.09
MSH5-206ENST00000423982 MRPS6P82932 125 aaKnown RBP14.49□□□□□ -0.09
MSH5-206ENST00000423982 OTUD1Q5VV17 481 aaPredicted RBP14.49□□□□□ -0.09
MSH5-206ENST00000423982 ITPRIPL1Q6GPH6 555 aa14.49□□□□□ -0.09
MSH5-206ENST00000423982 HMBOX1Q6NT76 420 aa14.49□□□□□ -0.09
MSH5-206ENST00000423982 ZYG11AQ6WRX3 759 aa14.49□□□□□ -0.09
MSH5-206ENST00000423982 SLC26A9Q7LBE3 791 aa14.49□□□□□ -0.09
MSH5-206ENST00000423982 ASB7Q9H672 318 aa14.49□□□□□ -0.09
MSH5-206ENST00000423982 TNFRSF12AQ9NP84 129 aa14.49□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms