RNA–Protein interactions for RNA: ENST00000421999.7

CMSS1-201, Transcript of cms1 ribosomal small subunit homolog (yeast), humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CMSS1, Length 4,330 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1-201ENST00000421999 RIPK2O43353 540 aa9.84□□□□□ -0.83
CMSS1-201ENST00000421999 E2F6O75461 281 aa9.84□□□□□ -0.83
CMSS1-201ENST00000421999 ALOX15P16050 662 aaPredicted RBP9.84□□□□□ -0.83
CMSS1-201ENST00000421999 ALDH18A1P54886 795 aaKnown RBP9.84□□□□□ -0.83
CMSS1-201ENST00000421999 WDR5P61964 334 aaKnown RBP9.84□□□□□ -0.83
CMSS1-201ENST00000421999 CDK16Q00536 496 aa9.84□□□□□ -0.83
CMSS1-201ENST00000421999 MGAT3Q09327 533 aa9.84□□□□□ -0.83
CMSS1-201ENST00000421999 ALKAL1Q6UXT8 129 aa9.84□□□□□ -0.83
CMSS1-201ENST00000421999 ARID3BQ8IVW6 561 aaPredicted RBP9.84□□□□□ -0.83
CMSS1-201ENST00000421999 TTC9BQ8N6N2 239 aa9.84□□□□□ -0.83
CMSS1-201ENST00000421999 AENQ8WTP8 325 aaKnown RBP9.84□□□□□ -0.83
CMSS1-201ENST00000421999 TUBGCP3Q96CW5 907 aa9.84□□□□□ -0.83
CMSS1-201ENST00000421999 GIMAP4Q9NUV9 329 aa9.84□□□□□ -0.83
CMSS1-201ENST00000421999 NINJ2Q9NZG7 142 aa9.84□□□□□ -0.83
CMSS1-201ENST00000421999 SLC31A1O15431 190 aa9.84□□□□□ -0.83
CMSS1-201ENST00000421999 RBP1P09455 135 aa9.84□□□□□ -0.83
CMSS1-201ENST00000421999 PGAM1P18669 254 aa9.84□□□□□ -0.83
CMSS1-201ENST00000421999 SOX11P35716 441 aa9.84□□□□□ -0.83
CMSS1-201ENST00000421999 KCNQ1P51787 676 aa9.84□□□□□ -0.83
CMSS1-201ENST00000421999 WASHC5Q12768 1159 aa9.84□□□□□ -0.83
CMSS1-201ENST00000421999 DSC3Q14574 896 aa9.84□□□□□ -0.83
CMSS1-201ENST00000421999 TEAD2Q15562 447 aa9.84□□□□□ -0.83
CMSS1-201ENST00000421999 BPIFB1Q8TDL5 484 aa9.84□□□□□ -0.83
CMSS1-201ENST00000421999 FEM1CQ96JP0 617 aa9.84□□□□□ -0.83
CMSS1-201ENST00000421999 CATSPERZQ9NTU4 200 aa9.84□□□□□ -0.83
CMSS1-201ENST00000421999 RIC8BQ9NVN3 520 aa9.84□□□□□ -0.83
CMSS1-201ENST00000421999 RCOR3Q9P2K3 495 aaPredicted RBP9.84□□□□□ -0.83
CMSS1-201ENST00000421999 APPL1Q9UKG1 709 aa9.84□□□□□ -0.83
CMSS1-201ENST00000421999 PCDHGC4Q9Y5F7 938 aa9.84□□□□□ -0.83
CMSS1-201ENST00000421999 SPACA6W5XKT8 324 aa9.84□□□□□ -0.83
CMSS1-201ENST00000421999 ATAD5Q96QE3 1844 aa9.84□□□□□ -0.83
CMSS1-201ENST00000421999 CCNT2O60583 730 aaKnown RBP9.83□□□□□ -0.84
CMSS1-201ENST00000421999 AVILO75366 819 aa9.83□□□□□ -0.84
CMSS1-201ENST00000421999 OAZ2O95190 189 aa9.83□□□□□ -0.84
CMSS1-201ENST00000421999 MT-CO1P00395 513 aa9.83□□□□□ -0.84
CMSS1-201ENST00000421999 CATP04040 527 aaKnown RBP9.83□□□□□ -0.84
CMSS1-201ENST00000421999 CYP2A7P20853 494 aa9.83□□□□□ -0.84
CMSS1-201ENST00000421999 LPOP22079 712 aaPredicted RBP9.83□□□□□ -0.84
CMSS1-201ENST00000421999 MAT2AP31153 395 aaKnown RBP9.83□□□□□ -0.84
CMSS1-201ENST00000421999 BMPR1AP36894 532 aa9.83□□□□□ -0.84
CMSS1-201ENST00000421999 SCNN1AP37088 669 aa9.83□□□□□ -0.84
CMSS1-201ENST00000421999 GABRB2P47870 512 aa9.83□□□□□ -0.84
CMSS1-201ENST00000421999 GTF2A1P52655 376 aaPredicted RBP9.83□□□□□ -0.84
CMSS1-201ENST00000421999 PDCD2Q16342 344 aaPredicted RBP9.83□□□□□ -0.84
CMSS1-201ENST00000421999 PARP15Q460N3 678 aa9.83□□□□□ -0.84
CMSS1-201ENST00000421999 PCID2Q5JVF3 399 aa9.83□□□□□ -0.84
CMSS1-201ENST00000421999 FAM26DQ5JW98 314 aa9.83□□□□□ -0.84
CMSS1-201ENST00000421999 HIBCHQ6NVY1 386 aaPredicted RBP9.83□□□□□ -0.84
CMSS1-201ENST00000421999 ZCCHC9Q8N567 271 aaKnown RBP9.83□□□□□ -0.84
CMSS1-201ENST00000421999 ELMO1Q92556 727 aa9.83□□□□□ -0.84
CMSS1-201ENST00000421999 JADE3Q92613 823 aa9.83□□□□□ -0.84
CMSS1-201ENST00000421999 CCDC124Q96CT7 223 aaKnown RBP9.83□□□□□ -0.84
CMSS1-201ENST00000421999 CXorf40BQ96DE9 158 aa9.83□□□□□ -0.84
CMSS1-201ENST00000421999 SERPINB12Q96P63 405 aa9.83□□□□□ -0.84
CMSS1-201ENST00000421999 CASD1Q96PB1 797 aa9.83□□□□□ -0.84
CMSS1-201ENST00000421999 ABCG8Q9H221 673 aa9.83□□□□□ -0.84
CMSS1-201ENST00000421999 TRIM45Q9H8W5 580 aaPredicted RBP9.83□□□□□ -0.84
CMSS1-201ENST00000421999 NIPSNAP3AQ9UFN0 247 aaPredicted RBP9.83□□□□□ -0.84
CMSS1-201ENST00000421999 TRIOBPQ9H2D6 2365 aa9.83□□□□□ -0.84
CMSS1-201ENST00000421999 CLUHO75153 1309 aa9.83□□□□□ -0.84
CMSS1-201ENST00000421999 CACNB4O00305 520 aaPredicted RBP9.83□□□□□ -0.84
CMSS1-201ENST00000421999 PLK1P53350 603 aa9.83□□□□□ -0.84
CMSS1-201ENST00000421999 NRLP54845 237 aa9.83□□□□□ -0.84
CMSS1-201ENST00000421999 PLIN5Q00G26 463 aa9.83□□□□□ -0.84
CMSS1-201ENST00000421999 DNAJC3Q13217 504 aa9.83□□□□□ -0.84
CMSS1-201ENST00000421999 MUM1Q2TAK8 710 aa9.83□□□□□ -0.84
CMSS1-201ENST00000421999 FOXR1Q6PIV2 292 aa9.83□□□□□ -0.84
CMSS1-201ENST00000421999 RRM2BQ7LG56 351 aa9.83□□□□□ -0.84
CMSS1-201ENST00000421999 CMTR2Q8IYT2 770 aaKnown RBP9.83□□□□□ -0.84
CMSS1-201ENST00000421999 ZNF366Q8N895 744 aa9.83□□□□□ -0.84
CMSS1-201ENST00000421999 MDM1Q8TC05 714 aa9.83□□□□□ -0.84
CMSS1-201ENST00000421999 NKD2Q969F2 451 aaPredicted RBP9.83□□□□□ -0.84
CMSS1-201ENST00000421999 TOP1MTQ969P6 601 aa9.83□□□□□ -0.84
CMSS1-201ENST00000421999 ZNF333Q96JL9 665 aa9.83□□□□□ -0.84
CMSS1-201ENST00000421999 SAMD11Q96NU1 681 aa9.83□□□□□ -0.84
CMSS1-201ENST00000421999 NPY6RQ99463 290 aa9.83□□□□□ -0.84
CMSS1-201ENST00000421999 ELOVL6Q9H5J4 265 aa9.83□□□□□ -0.84
CMSS1-201ENST00000421999 RUBCNLQ9H714 662 aa9.83□□□□□ -0.84
CMSS1-201ENST00000421999 GGT7Q9UJ14 662 aa9.83□□□□□ -0.84
CMSS1-201ENST00000421999 SEC23IPQ9Y6Y8 1000 aaKnown RBP9.83□□□□□ -0.84
CMSS1-201ENST00000421999 M0QZQ0 153 aa9.83□□□□□ -0.84
CMSS1-201ENST00000421999 GABRDO14764 452 aa9.83□□□□□ -0.84
CMSS1-201ENST00000421999 TEX28O15482 410 aa9.83□□□□□ -0.84
CMSS1-201ENST00000421999 PHGDHO43175 533 aaKnown RBP9.83□□□□□ -0.84
CMSS1-201ENST00000421999 ZBTB14O43829 449 aa9.83□□□□□ -0.84
CMSS1-201ENST00000421999 DGKEP52429 567 aa9.83□□□□□ -0.84
CMSS1-201ENST00000421999 CDH4P55283 916 aa9.83□□□□□ -0.84
CMSS1-201ENST00000421999 NAA25Q14CX7 972 aa9.83□□□□□ -0.84
CMSS1-201ENST00000421999 DPYSL2Q16555 572 aa9.83□□□□□ -0.84
CMSS1-201ENST00000421999 PTPRNQ16849 979 aa9.83□□□□□ -0.84
CMSS1-201ENST00000421999 LCA5Q86VQ0 697 aa9.83□□□□□ -0.84
CMSS1-201ENST00000421999 PLD4Q96BZ4 506 aa9.83□□□□□ -0.84
CMSS1-201ENST00000421999 SMG9Q9H0W8 520 aaKnown RBP9.83□□□□□ -0.84
CMSS1-201ENST00000421999 TMEM59LQ9UK28 342 aa9.83□□□□□ -0.84
CMSS1-201ENST00000421999 BTN3A1O00481 513 aa9.83□□□□□ -0.84
CMSS1-201ENST00000421999 EIF3HO15372 352 aaKnown RBP eCLIP9.83□□□□□ -0.84
CMSS1-201ENST00000421999 CCDC22O60826 627 aa9.83□□□□□ -0.84
CMSS1-201ENST00000421999 SH3BGRLO75368 114 aa9.83□□□□□ -0.84
CMSS1-201ENST00000421999 RFPL2O75678 378 aa9.83□□□□□ -0.84
CMSS1-201ENST00000421999 PRNPP04156 253 aa9.83□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms