RNA–Protein interactions for RNA: ENST00000420706.1

TMEM53-206, Transcript of transmembrane protein 53, humanhuman

TSL 2

Gene TMEM53, Length 415 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-206ENST00000420706 GEMP55040 296 aa12.64□□□□□ -0.39
TMEM53-206ENST00000420706 AP1S1P61966 158 aa12.64□□□□□ -0.39
TMEM53-206ENST00000420706 BASP1P80723 227 aaKnown RBP12.64□□□□□ -0.39
TMEM53-206ENST00000420706 GUCY2DQ02846 1103 aa12.64□□□□□ -0.39
TMEM53-206ENST00000420706 RAD51Q06609 339 aa12.64□□□□□ -0.39
TMEM53-206ENST00000420706 MPP3Q13368 585 aa12.64□□□□□ -0.39
TMEM53-206ENST00000420706 UBXN2BQ14CS0 331 aa12.64□□□□□ -0.39
TMEM53-206ENST00000420706 SLC14A2Q15849 920 aa12.64□□□□□ -0.39
TMEM53-206ENST00000420706 IZUMO3Q5VZ72 239 aa12.64□□□□□ -0.39
TMEM53-206ENST00000420706 KCTD11Q693B1 232 aa12.64□□□□□ -0.39
TMEM53-206ENST00000420706 SDE2Q6IQ49 451 aa12.64□□□□□ -0.39
TMEM53-206ENST00000420706 KDELC1Q6UW63 502 aa12.64□□□□□ -0.39
TMEM53-206ENST00000420706 TRMT11Q7Z4G4 463 aaKnown RBP12.64□□□□□ -0.39
TMEM53-206ENST00000420706 PCGF5Q86SE9 256 aa12.64□□□□□ -0.39
TMEM53-206ENST00000420706 SYNPOQ8N3V7 929 aa12.64□□□□□ -0.39
TMEM53-206ENST00000420706 RYBPQ8N488 228 aaPredicted RBP12.64□□□□□ -0.39
TMEM53-206ENST00000420706 PDCD7Q8N8D1 485 aaKnown RBP12.64□□□□□ -0.39
TMEM53-206ENST00000420706 TXNDC5Q8NBS9 432 aaKnown RBP12.64□□□□□ -0.39
TMEM53-206ENST00000420706 OR6K2Q8NGY2 324 aa12.64□□□□□ -0.39
TMEM53-206ENST00000420706 CPT1BQ92523 772 aa12.64□□□□□ -0.39
TMEM53-206ENST00000420706 UBXN4Q92575 508 aa12.64□□□□□ -0.39
TMEM53-206ENST00000420706 EDAQ92838 391 aa12.64□□□□□ -0.39
TMEM53-206ENST00000420706 SNF8Q96H20 258 aa12.64□□□□□ -0.39
TMEM53-206ENST00000420706 PPP1R2P1Q96PQ5 205 aa12.64□□□□□ -0.39
TMEM53-206ENST00000420706 GABRG3Q99928 467 aa12.64□□□□□ -0.39
TMEM53-206ENST00000420706 HEPHQ9BQS7 1158 aa12.64□□□□□ -0.39
TMEM53-206ENST00000420706 CPEB1Q9BZB8 566 aaKnown RBP12.64□□□□□ -0.39
TMEM53-206ENST00000420706 EPC1Q9H2F5 836 aa12.64□□□□□ -0.39
TMEM53-206ENST00000420706 TBC1D17Q9HA65 648 aa12.64□□□□□ -0.39
TMEM53-206ENST00000420706 EPB41L5Q9HCM4 733 aa12.64□□□□□ -0.39
TMEM53-206ENST00000420706 PRSS16Q9NQE7 514 aa12.64□□□□□ -0.39
TMEM53-206ENST00000420706 GDF3Q9NR23 364 aa12.64□□□□□ -0.39
TMEM53-206ENST00000420706 VPS45Q9NRW7 570 aa12.64□□□□□ -0.39
TMEM53-206ENST00000420706 FAM153AQ9UHL3 310 aa12.64□□□□□ -0.39
TMEM53-206ENST00000420706 AAR2Q9Y312 384 aaKnown RBP12.64□□□□□ -0.39
TMEM53-206ENST00000420706 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP12.63□□□□□ -0.39
TMEM53-206ENST00000420706 TCRBV7S3A2A0A539 114 aa12.63□□□□□ -0.39
TMEM53-206ENST00000420706 TNFRSF10AO00220 468 aa12.63□□□□□ -0.39
TMEM53-206ENST00000420706 ADAM23O75077 832 aa12.63□□□□□ -0.39
TMEM53-206ENST00000420706 SEC31AO94979 1220 aaKnown RBP12.63□□□□□ -0.39
TMEM53-206ENST00000420706 MAGEA6P43360 314 aa12.63□□□□□ -0.39
TMEM53-206ENST00000420706 MAPK8P45983 427 aa12.63□□□□□ -0.39
TMEM53-206ENST00000420706 SIGLEC14Q08ET2 396 aa12.63□□□□□ -0.39
TMEM53-206ENST00000420706 LRRC32Q14392 662 aa12.63□□□□□ -0.39
TMEM53-206ENST00000420706 KCNJ11Q14654 390 aa12.63□□□□□ -0.39
TMEM53-206ENST00000420706 ERCC6LQ2NKX8 1250 aa12.63□□□□□ -0.39
TMEM53-206ENST00000420706 HSF5Q4G112 596 aaPredicted RBP12.63□□□□□ -0.39
TMEM53-206ENST00000420706 SYCP2LQ5T4T6 812 aa12.63□□□□□ -0.39
TMEM53-206ENST00000420706 RNASEH2BQ5TBB1 312 aaKnown RBP12.63□□□□□ -0.39
TMEM53-206ENST00000420706 STK40Q8N2I9 435 aa12.63□□□□□ -0.39
TMEM53-206ENST00000420706 NAT8LQ8N9F0 302 aa12.63□□□□□ -0.39
TMEM53-206ENST00000420706 BBOF1Q8ND07 529 aa12.63□□□□□ -0.39
TMEM53-206ENST00000420706 RPLP0P6Q8NHW5 317 aa12.63□□□□□ -0.39
TMEM53-206ENST00000420706 MRGPRX2Q96LB1 330 aa12.63□□□□□ -0.39
TMEM53-206ENST00000420706 FAM129BQ96TA1 746 aa12.63□□□□□ -0.39
TMEM53-206ENST00000420706 OSBPL6Q9BZF3 934 aa12.63□□□□□ -0.39
TMEM53-206ENST00000420706 FOXQ1Q9C009 403 aa12.63□□□□□ -0.39
TMEM53-206ENST00000420706 ANKZF1Q9H8Y5 726 aa12.63□□□□□ -0.39
TMEM53-206ENST00000420706 FAM114A2Q9NRY5 505 aa12.63□□□□□ -0.39
TMEM53-206ENST00000420706 GRHL1Q9NZI5 618 aa12.63□□□□□ -0.39
TMEM53-206ENST00000420706 WHRNQ9P202 907 aa12.63□□□□□ -0.39
TMEM53-206ENST00000420706 NOL12Q9UGY1 213 aaKnown RBP eCLIP12.63□□□□□ -0.39
TMEM53-206ENST00000420706 FARP1Q9Y4F1 1045 aaPredicted RBP12.63□□□□□ -0.39
TMEM53-206ENST00000420706 PCDHGC4Q9Y5F7 938 aa12.63□□□□□ -0.39
TMEM53-206ENST00000420706 WASF2Q9Y6W5 498 aa12.63□□□□□ -0.39
TMEM53-206ENST00000420706 V9GYY5 206 aaPredicted RBP12.63□□□□□ -0.39
TMEM53-206ENST00000420706 A0A0C4DFX4 3053 aa12.63□□□□□ -0.39
TMEM53-206ENST00000420706 UNC80Q8N2C7 3258 aa12.63□□□□□ -0.39
TMEM53-206ENST00000420706 ESYT3A0FGR9 886 aa12.62□□□□□ -0.39
TMEM53-206ENST00000420706 GOLGA6CA6NDK9 693 aa12.62□□□□□ -0.39
TMEM53-206ENST00000420706 GOLGA6BA6NDN3 693 aa12.62□□□□□ -0.39
TMEM53-206ENST00000420706 ERI2A8K979 691 aaKnown RBP12.62□□□□□ -0.39
TMEM53-206ENST00000420706 CHURC1-FNTBB4DL54 471 aa12.62□□□□□ -0.39
TMEM53-206ENST00000420706 E7EVH7 732 aa12.62□□□□□ -0.39
TMEM53-206ENST00000420706 TP73O15350 636 aa12.62□□□□□ -0.39
TMEM53-206ENST00000420706 DCXO43602 365 aa12.62□□□□□ -0.39
TMEM53-206ENST00000420706 PMPCBO75439 489 aa12.62□□□□□ -0.39
TMEM53-206ENST00000420706 SUN1O94901 812 aa12.62□□□□□ -0.39
TMEM53-206ENST00000420706 AP2A1O95782 977 aa12.62□□□□□ -0.39
TMEM53-206ENST00000420706 CTSLP07711 333 aa12.62□□□□□ -0.39
TMEM53-206ENST00000420706 GOLGA6DP0CG33 693 aa12.62□□□□□ -0.39
TMEM53-206ENST00000420706 TPSB2P20231 275 aa12.62□□□□□ -0.39
TMEM53-206ENST00000420706 ADRA1AP35348 466 aa12.62□□□□□ -0.39
TMEM53-206ENST00000420706 LMAN1P49257 510 aa12.62□□□□□ -0.39
TMEM53-206ENST00000420706 ITGA8P53708 1063 aa12.62□□□□□ -0.39
TMEM53-206ENST00000420706 WNT3AP56704 352 aa12.62□□□□□ -0.39
TMEM53-206ENST00000420706 BCL2L1Q07817 233 aa12.62□□□□□ -0.39
TMEM53-206ENST00000420706 TRAF2Q12933 501 aa12.62□□□□□ -0.39
TMEM53-206ENST00000420706 CAMK2GQ13555 558 aaPredicted RBP12.62□□□□□ -0.39
TMEM53-206ENST00000420706 SPARCL1Q14515 664 aa12.62□□□□□ -0.39
TMEM53-206ENST00000420706 NAA30Q147X3 362 aaPredicted RBP12.62□□□□□ -0.39
TMEM53-206ENST00000420706 GRM3Q14832 879 aa12.62□□□□□ -0.39
TMEM53-206ENST00000420706 TPSAB1Q15661 275 aa12.62□□□□□ -0.39
TMEM53-206ENST00000420706 ARSIQ5FYB1 569 aa12.62□□□□□ -0.39
TMEM53-206ENST00000420706 EOGTQ5NDL2 527 aa12.62□□□□□ -0.39
TMEM53-206ENST00000420706 ANKRD22Q5VYY1 191 aa12.62□□□□□ -0.39
TMEM53-206ENST00000420706 HIBCHQ6NVY1 386 aaPredicted RBP12.62□□□□□ -0.39
TMEM53-206ENST00000420706 PKN3Q6P5Z2 889 aa12.62□□□□□ -0.39
TMEM53-206ENST00000420706 CAMK1DQ8IU85 385 aa12.62□□□□□ -0.39
TMEM53-206ENST00000420706 PPIL6Q8IXY8 311 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms