RNA–Protein interactions for RNA: ENST00000415788.2

SGCE-202, Transcript of sarcoglycan epsilon, humanhuman

TSL 2 BASIC

Gene SGCE, Length 1,871 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-202ENST00000415788 PJA1Q8NG27 643 aa14.74□□□□□ -0.05
SGCE-202ENST00000415788 ACTL9Q8TC94 416 aa14.74□□□□□ -0.05
SGCE-202ENST00000415788 RUNDC3BQ96NL0 473 aa14.74□□□□□ -0.05
SGCE-202ENST00000415788 TRIM51Q9BSJ1 452 aa14.74□□□□□ -0.05
SGCE-202ENST00000415788 HOMER3Q9NSC5 361 aa14.74□□□□□ -0.05
SGCE-202ENST00000415788 SAE1Q9UBE0 346 aaPredicted RBP14.74□□□□□ -0.05
SGCE-202ENST00000415788 C15orf41Q9Y2V0 281 aa14.74□□□□□ -0.05
SGCE-202ENST00000415788 STK25O00506 426 aa14.74□□□□□ -0.05
SGCE-202ENST00000415788 MTSS1O43312 755 aa14.74□□□□□ -0.05
SGCE-202ENST00000415788 CHRNA3P32297 505 aa14.74□□□□□ -0.05
SGCE-202ENST00000415788 SERPINH1P50454 418 aaKnown RBP14.74□□□□□ -0.05
SGCE-202ENST00000415788 SATB1Q01826 763 aa14.74□□□□□ -0.05
SGCE-202ENST00000415788 ZKSCAN8Q15776 578 aaPredicted RBP14.74□□□□□ -0.05
SGCE-202ENST00000415788 PTPRNQ16849 979 aa14.74□□□□□ -0.05
SGCE-202ENST00000415788 INO80DQ53TQ3 878 aaPredicted RBP14.74□□□□□ -0.05
SGCE-202ENST00000415788 TNFAIP8L3Q5GJ75 292 aa14.74□□□□□ -0.05
SGCE-202ENST00000415788 SFTPA1Q8IWL2 248 aa14.74□□□□□ -0.05
SGCE-202ENST00000415788 USP33Q8TEY7 942 aa14.74□□□□□ -0.05
SGCE-202ENST00000415788 TFB1MQ8WVM0 346 aaKnown RBP14.74□□□□□ -0.05
SGCE-202ENST00000415788 HAUS1Q96CS2 278 aa14.74□□□□□ -0.05
SGCE-202ENST00000415788 FERMT1Q9BQL6 677 aa14.74□□□□□ -0.05
SGCE-202ENST00000415788 ROPN1BQ9BZX4 212 aaPredicted RBP14.74□□□□□ -0.05
SGCE-202ENST00000415788 ROPN1Q9HAT0 212 aaPredicted RBP14.74□□□□□ -0.05
SGCE-202ENST00000415788 LMAN1LQ9HAT1 526 aa14.74□□□□□ -0.05
SGCE-202ENST00000415788 PDFQ9HBH1 243 aa14.74□□□□□ -0.05
SGCE-202ENST00000415788 NOP53Q9NZM5 478 aaKnown RBP14.74□□□□□ -0.05
SGCE-202ENST00000415788 UBA2Q9UBT2 640 aaPredicted RBP14.74□□□□□ -0.05
SGCE-202ENST00000415788 F5P12259 2224 aa14.73□□□□□ -0.05
SGCE-202ENST00000415788 TCRBV7S2A1N4TA0A589 114 aa14.73□□□□□ -0.05
SGCE-202ENST00000415788 CCDC189A1A4V9 331 aa14.73□□□□□ -0.05
SGCE-202ENST00000415788 PHF2O75151 1096 aa14.73□□□□□ -0.05
SGCE-202ENST00000415788 MAP3K6O95382 1288 aa14.73□□□□□ -0.05
SGCE-202ENST00000415788 NQO1P15559 274 aaKnown RBP14.73□□□□□ -0.05
SGCE-202ENST00000415788 GLDCP23378 1020 aa14.73□□□□□ -0.05
SGCE-202ENST00000415788 CCND1P24385 295 aa14.73□□□□□ -0.05
SGCE-202ENST00000415788 CTSOP43234 321 aaPredicted RBP14.73□□□□□ -0.05
SGCE-202ENST00000415788 NAA25Q14CX7 972 aa14.73□□□□□ -0.05
SGCE-202ENST00000415788 FNDC3BQ53EP0 1204 aaKnown RBP14.73□□□□□ -0.05
SGCE-202ENST00000415788 EGFLAMQ63HQ2 1017 aa14.73□□□□□ -0.05
SGCE-202ENST00000415788 SDE2Q6IQ49 451 aa14.73□□□□□ -0.05
SGCE-202ENST00000415788 ARHGAP36Q6ZRI8 547 aa14.73□□□□□ -0.05
SGCE-202ENST00000415788 JAMLQ86YT9 394 aa14.73□□□□□ -0.05
SGCE-202ENST00000415788 CHPFQ8IZ52 775 aa14.73□□□□□ -0.05
SGCE-202ENST00000415788 BBS5Q8N3I7 341 aa14.73□□□□□ -0.05
SGCE-202ENST00000415788 NETO2Q8NC67 525 aa14.73□□□□□ -0.05
SGCE-202ENST00000415788 CYB5D2Q8WUJ1 264 aa14.73□□□□□ -0.05
SGCE-202ENST00000415788 SORCS1Q8WY21 1168 aa14.73□□□□□ -0.05
SGCE-202ENST00000415788 CLDN23Q96B33 292 aa14.73□□□□□ -0.05
SGCE-202ENST00000415788 MRGPRX3Q96LB0 322 aa14.73□□□□□ -0.05
SGCE-202ENST00000415788 IER2Q9BTL4 223 aa14.73□□□□□ -0.05
SGCE-202ENST00000415788 FOXQ1Q9C009 403 aa14.73□□□□□ -0.05
SGCE-202ENST00000415788 CEP44Q9C0F1 390 aa14.73□□□□□ -0.05
SGCE-202ENST00000415788 SIT1Q9Y3P8 196 aa14.73□□□□□ -0.05
SGCE-202ENST00000415788 TMEM221A6NGB7 291 aa14.72□□□□□ -0.05
SGCE-202ENST00000415788 J3KR12 359 aa14.72□□□□□ -0.05
SGCE-202ENST00000415788 M0R296 226 aa14.72□□□□□ -0.05
SGCE-202ENST00000415788 TNFRSF10AO00220 468 aa14.72□□□□□ -0.05
SGCE-202ENST00000415788 ATP9BO43861 1147 aa14.72□□□□□ -0.05
SGCE-202ENST00000415788 ATG13O75143 517 aa14.72□□□□□ -0.05
SGCE-202ENST00000415788 SHBGP04278 402 aa14.72□□□□□ -0.05
SGCE-202ENST00000415788 TIE1P35590 1138 aa14.72□□□□□ -0.05
SGCE-202ENST00000415788 RPS9P46781 194 aaKnown RBP14.72□□□□□ -0.05
SGCE-202ENST00000415788 SEC13P55735 322 aa14.72□□□□□ -0.05
SGCE-202ENST00000415788 EIF3EP60228 445 aaKnown RBP14.72□□□□□ -0.05
SGCE-202ENST00000415788 IRX1P78414 480 aaPredicted RBP14.72□□□□□ -0.05
SGCE-202ENST00000415788 ENPP2Q13822 863 aa14.72□□□□□ -0.05
SGCE-202ENST00000415788 HNRNPDQ14103 355 aaKnown RBP14.72□□□□□ -0.05
SGCE-202ENST00000415788 ZNF234Q14588 700 aa14.72□□□□□ -0.05
SGCE-202ENST00000415788 PRKD1Q15139 912 aaPredicted RBP14.72□□□□□ -0.05
SGCE-202ENST00000415788 SLC45A4Q5BKX6 768 aa14.72□□□□□ -0.05
SGCE-202ENST00000415788 ZDHHC24Q6UX98 284 aa14.72□□□□□ -0.05
SGCE-202ENST00000415788 SERPINA13PQ6UXR4 307 aa14.72□□□□□ -0.05
SGCE-202ENST00000415788 LINGO4Q6UY18 593 aa14.72□□□□□ -0.05
SGCE-202ENST00000415788 CDKL3Q8IVW4 592 aaPredicted RBP14.72□□□□□ -0.05
SGCE-202ENST00000415788 CCDC105Q8IYK2 499 aa14.72□□□□□ -0.05
SGCE-202ENST00000415788 ATP11CQ8NB49 1132 aa14.72□□□□□ -0.05
SGCE-202ENST00000415788 FLCNQ8NFG4 579 aa14.72□□□□□ -0.05
SGCE-202ENST00000415788 RPL10LQ96L21 214 aaKnown RBP14.72□□□□□ -0.05
SGCE-202ENST00000415788 ANKRD27Q96NW4 1050 aa14.72□□□□□ -0.05
SGCE-202ENST00000415788 LGMNQ99538 433 aa14.72□□□□□ -0.05
SGCE-202ENST00000415788 ELAC2Q9BQ52 826 aaKnown RBP14.72□□□□□ -0.05
SGCE-202ENST00000415788 TMEM245Q9H330 911 aa14.72□□□□□ -0.05
SGCE-202ENST00000415788 PCYOX1Q9UHG3 505 aa14.72□□□□□ -0.05
SGCE-202ENST00000415788 MTF2Q9Y483 593 aaPredicted RBP14.72□□□□□ -0.05
SGCE-202ENST00000415788 CHURC1-FNTBB4DL54 471 aa14.72□□□□□ -0.05
SGCE-202ENST00000415788 H7C0C1 242 aa14.72□□□□□ -0.05
SGCE-202ENST00000415788 MATN3O15232 486 aa14.72□□□□□ -0.05
SGCE-202ENST00000415788 SNX3O60493 162 aa14.72□□□□□ -0.05
SGCE-202ENST00000415788 VIMP08670 466 aaKnown RBP14.72□□□□□ -0.05
SGCE-202ENST00000415788 RBP3P10745 1247 aa14.72□□□□□ -0.05
SGCE-202ENST00000415788 SRCP12931 536 aa14.72□□□□□ -0.05
SGCE-202ENST00000415788 NTSR1P30989 418 aa14.72□□□□□ -0.05
SGCE-202ENST00000415788 ATP5OP48047 213 aa14.72□□□□□ -0.05
SGCE-202ENST00000415788 NUMBP49757 651 aa14.72□□□□□ -0.05
SGCE-202ENST00000415788 RENBPP51606 427 aa14.72□□□□□ -0.05
SGCE-202ENST00000415788 AP1B1Q10567 949 aa14.72□□□□□ -0.05
SGCE-202ENST00000415788 CCNG2Q16589 344 aa14.72□□□□□ -0.05
SGCE-202ENST00000415788 C2orf27AQ580R0 203 aa14.72□□□□□ -0.05
SGCE-202ENST00000415788 EOGTQ5NDL2 527 aa14.72□□□□□ -0.05
SGCE-202ENST00000415788 DRICH1Q6PGQ1 229 aaPredicted RBP14.72□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms