RNA–Protein interactions for RNA: ENST00000413232.5

CPSF7-204, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 3

Gene CPSF7, Length 727 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-204ENST00000413232 BRINP1O60477 761 aa19.5■□□□□ 0.71
CPSF7-204ENST00000413232 POP4O95707 220 aaKnown RBP19.5■□□□□ 0.71
CPSF7-204ENST00000413232 GSRP00390 522 aa19.5■□□□□ 0.71
CPSF7-204ENST00000413232 CSF2P04141 144 aa19.5■□□□□ 0.71
CPSF7-204ENST00000413232 NSFP46459 744 aaKnown RBP19.5■□□□□ 0.71
CPSF7-204ENST00000413232 E2F1Q01094 437 aa19.5■□□□□ 0.71
CPSF7-204ENST00000413232 EIF2B5Q13144 721 aaKnown RBP19.5■□□□□ 0.71
CPSF7-204ENST00000413232 CDCP2Q5VXM1 449 aa19.5■□□□□ 0.71
CPSF7-204ENST00000413232 SLFN11Q7Z7L1 901 aa19.5■□□□□ 0.71
CPSF7-204ENST00000413232 DCP2Q8IU60 420 aaKnown RBP19.5■□□□□ 0.71
CPSF7-204ENST00000413232 C3orf20Q8ND61 904 aa19.5■□□□□ 0.71
CPSF7-204ENST00000413232 ZNF548Q8NEK5 533 aaPredicted RBP19.5■□□□□ 0.71
CPSF7-204ENST00000413232 LENG8Q96PV6 779 aaPredicted RBP19.5■□□□□ 0.71
CPSF7-204ENST00000413232 NLGN3Q9NZ94 848 aa19.5■□□□□ 0.71
CPSF7-204ENST00000413232 HPCAL4Q9UM19 191 aa19.5■□□□□ 0.71
CPSF7-204ENST00000413232 RAI2Q9Y5P3 530 aa19.5■□□□□ 0.71
CPSF7-204ENST00000413232 TSPAN6O43657 245 aa19.49■□□□□ 0.71
CPSF7-204ENST00000413232 BUB1O43683 1085 aa19.49■□□□□ 0.71
CPSF7-204ENST00000413232 OPA1O60313 960 aa19.49■□□□□ 0.71
CPSF7-204ENST00000413232 TMCC1O94876 653 aa19.49■□□□□ 0.71
CPSF7-204ENST00000413232 NME1P15531 152 aaKnown RBP19.49■□□□□ 0.71
CPSF7-204ENST00000413232 PFN3P60673 137 aa19.49■□□□□ 0.71
CPSF7-204ENST00000413232 HNRNPKP61978 463 aaKnown RBP eCLIP19.49■□□□□ 0.71
CPSF7-204ENST00000413232 SNRPD1P62314 119 aaKnown RBP19.49■□□□□ 0.71
CPSF7-204ENST00000413232 OGDHQ02218 1023 aa19.49■□□□□ 0.71
CPSF7-204ENST00000413232 PDE1CQ14123 709 aaPredicted RBP19.49■□□□□ 0.71
CPSF7-204ENST00000413232 NCAPHQ15003 741 aa19.49■□□□□ 0.71
CPSF7-204ENST00000413232 PPP1R15BQ5SWA1 713 aa19.49■□□□□ 0.71
CPSF7-204ENST00000413232 SCYL2Q6P3W7 929 aa19.49■□□□□ 0.71
CPSF7-204ENST00000413232 RTL3Q8N8U3 475 aaKnown RBP19.49■□□□□ 0.71
CPSF7-204ENST00000413232 NEK11Q8NG66 645 aa19.49■□□□□ 0.71
CPSF7-204ENST00000413232 FAM174AQ8TBP5 190 aa19.49■□□□□ 0.71
CPSF7-204ENST00000413232 RAB7BQ96AH8 199 aa19.49■□□□□ 0.71
CPSF7-204ENST00000413232 CENPTQ96BT3 561 aa19.49■□□□□ 0.71
CPSF7-204ENST00000413232 HMCESQ96FZ2 354 aa19.49■□□□□ 0.71
CPSF7-204ENST00000413232 TCEAL2Q9H3H9 227 aaPredicted RBP19.49■□□□□ 0.71
CPSF7-204ENST00000413232 LRRC10BA6NIK2 292 aa19.48■□□□□ 0.71
CPSF7-204ENST00000413232 CASC3O15234 703 aaKnown RBP19.48■□□□□ 0.71
CPSF7-204ENST00000413232 INSIG1O15503 277 aa19.48■□□□□ 0.71
CPSF7-204ENST00000413232 CALB1P05937 261 aa19.48■□□□□ 0.71
CPSF7-204ENST00000413232 EPHB2P29323 1055 aa19.48■□□□□ 0.71
CPSF7-204ENST00000413232 ABCG1P45844 678 aa19.48■□□□□ 0.71
CPSF7-204ENST00000413232 RABIFP47224 123 aa19.48■□□□□ 0.71
CPSF7-204ENST00000413232 GEMIN4P57678 1058 aaKnown RBP19.48■□□□□ 0.71
CPSF7-204ENST00000413232 UBXN1Q04323 297 aa19.48■□□□□ 0.71
CPSF7-204ENST00000413232 SGCGQ13326 291 aa19.48■□□□□ 0.71
CPSF7-204ENST00000413232 GDPD4Q6W3E5 623 aa19.48■□□□□ 0.71
CPSF7-204ENST00000413232 PARGQ86W56 976 aa19.48■□□□□ 0.71
CPSF7-204ENST00000413232 FAM181AQ8N9Y4 354 aa19.48■□□□□ 0.71
CPSF7-204ENST00000413232 ASB12Q8WXK4 309 aa19.48■□□□□ 0.71
CPSF7-204ENST00000413232 PCMTD1Q96MG8 357 aaPredicted RBP19.48■□□□□ 0.71
CPSF7-204ENST00000413232 ERGIC2Q96RQ1 377 aa19.48■□□□□ 0.71
CPSF7-204ENST00000413232 AGPAT1Q99943 283 aa19.48■□□□□ 0.71
CPSF7-204ENST00000413232 TTYH3Q9C0H2 523 aa19.48■□□□□ 0.71
CPSF7-204ENST00000413232 SEPT11Q9NVA2 429 aaKnown RBP19.48■□□□□ 0.71
CPSF7-204ENST00000413232 TAS2R14Q9NYV8 317 aa19.48■□□□□ 0.71
CPSF7-204ENST00000413232 FZD10Q9ULW2 581 aa19.48■□□□□ 0.71
CPSF7-204ENST00000413232 DAAM1Q9Y4D1 1078 aa19.48■□□□□ 0.71
CPSF7-204ENST00000413232 LRP4O75096 1905 aa19.48■□□□□ 0.71
CPSF7-204ENST00000413232 NEMP2A6NFY4 417 aa19.47■□□□□ 0.71
CPSF7-204ENST00000413232 NEMP1O14524 444 aa19.47■□□□□ 0.71
CPSF7-204ENST00000413232 FPGTO14772 594 aa19.47■□□□□ 0.71
CPSF7-204ENST00000413232 CREB3O43889 395 aa19.47■□□□□ 0.71
CPSF7-204ENST00000413232 MMP20O60882 483 aa19.47■□□□□ 0.71
CPSF7-204ENST00000413232 TPM2P07951 284 aa19.47■□□□□ 0.71
CPSF7-204ENST00000413232 TIMP2P16035 220 aa19.47■□□□□ 0.71
CPSF7-204ENST00000413232 JUNDP17535 347 aa19.47■□□□□ 0.71
CPSF7-204ENST00000413232 IGFALSP35858 605 aa19.47■□□□□ 0.71
CPSF7-204ENST00000413232 ZNF143P52747 638 aaPredicted RBP19.47■□□□□ 0.71
CPSF7-204ENST00000413232 CYTH1Q15438 398 aa19.47■□□□□ 0.71
CPSF7-204ENST00000413232 HS1BP3Q53T59 392 aa19.47■□□□□ 0.71
CPSF7-204ENST00000413232 TTC7BQ86TV6 843 aa19.47■□□□□ 0.71
CPSF7-204ENST00000413232 ZNF354CQ86Y25 554 aa19.47■□□□□ 0.71
CPSF7-204ENST00000413232 RBFAQ8N0V3 343 aa19.47■□□□□ 0.71
CPSF7-204ENST00000413232 SNIP1Q8TAD8 396 aaKnown RBP19.47■□□□□ 0.71
CPSF7-204ENST00000413232 MCEEQ96PE7 176 aa19.47■□□□□ 0.71
CPSF7-204ENST00000413232 MBNL1Q9NR56 388 aaKnown RBP19.47■□□□□ 0.71
CPSF7-204ENST00000413232 RASA4BC9J798 803 aa19.46■□□□□ 0.71
CPSF7-204ENST00000413232 RASA4O43374 803 aa19.46■□□□□ 0.71
CPSF7-204ENST00000413232 GCATO75600 419 aa19.46■□□□□ 0.71
CPSF7-204ENST00000413232 ALPPL2P10696 532 aa19.46■□□□□ 0.71
CPSF7-204ENST00000413232 ATP1A3P13637 1013 aa19.46■□□□□ 0.71
CPSF7-204ENST00000413232 MYL5Q02045 173 aa19.46■□□□□ 0.71
CPSF7-204ENST00000413232 C1QBPQ07021 282 aaKnown RBP19.46■□□□□ 0.71
CPSF7-204ENST00000413232 SERINC3Q13530 473 aa19.46■□□□□ 0.71
CPSF7-204ENST00000413232 ACAP1Q15027 740 aa19.46■□□□□ 0.71
CPSF7-204ENST00000413232 DEFB133Q30KQ1 61 aa19.46■□□□□ 0.71
CPSF7-204ENST00000413232 DNAJC24Q6P3W2 148 aa19.46■□□□□ 0.71
CPSF7-204ENST00000413232 VPS36Q86VN1 386 aa19.46■□□□□ 0.71
CPSF7-204ENST00000413232 DNAAF5Q86Y56 855 aa19.46■□□□□ 0.71
CPSF7-204ENST00000413232 FGF11Q92914 225 aa19.46■□□□□ 0.71
CPSF7-204ENST00000413232 EXOC2Q96KP1 924 aa19.46■□□□□ 0.71
CPSF7-204ENST00000413232 SYT11Q9BT88 431 aa19.46■□□□□ 0.71
CPSF7-204ENST00000413232 OSBPL1AQ9BXW6 950 aa19.46■□□□□ 0.71
CPSF7-204ENST00000413232 PRORYQ9H606 182 aa19.46■□□□□ 0.71
CPSF7-204ENST00000413232 GPATCH2LQ9NWQ4 482 aa19.46■□□□□ 0.71
CPSF7-204ENST00000413232 LHX3Q9UBR4 397 aa19.46■□□□□ 0.71
CPSF7-204ENST00000413232 IPO11Q9UI26 975 aaKnown RBP19.46■□□□□ 0.71
CPSF7-204ENST00000413232 ZSCAN5CA6NGD5 496 aaPredicted RBP19.45■□□□□ 0.7
CPSF7-204ENST00000413232 WASH4PA8MWX3 477 aa19.45■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms