RNA–Protein interactions for RNA: ENST00000413219.6

SDCBP-202, Transcript of syndecan binding protein, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SDCBP, Length 2,086 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-202ENST00000413219 ZNF560Q96MR9 790 aa17.82■□□□□ 0.44
SDCBP-202ENST00000413219 SLC29A1Q99808 456 aa17.82■□□□□ 0.44
SDCBP-202ENST00000413219 APOL2Q9BQE5 337 aa17.82■□□□□ 0.44
SDCBP-202ENST00000413219 PLGRKTQ9HBL7 147 aa17.82■□□□□ 0.44
SDCBP-202ENST00000413219 TRPC7Q9HCX4 862 aa17.82■□□□□ 0.44
SDCBP-202ENST00000413219 ZNF510Q9Y2H8 683 aa17.82■□□□□ 0.44
SDCBP-202ENST00000413219 FAM95CA0A1B0GW59 222 aa17.81■□□□□ 0.44
SDCBP-202ENST00000413219 GOLGA8TH3BQL2 631 aa17.81■□□□□ 0.44
SDCBP-202ENST00000413219 PIRO00625 290 aa17.81■□□□□ 0.44
SDCBP-202ENST00000413219 FBP2O00757 339 aa17.81■□□□□ 0.44
SDCBP-202ENST00000413219 CSPG5O95196 566 aa17.81■□□□□ 0.44
SDCBP-202ENST00000413219 CD4P01730 458 aa17.81■□□□□ 0.44
SDCBP-202ENST00000413219 TKTP29401 623 aaKnown RBP17.81■□□□□ 0.44
SDCBP-202ENST00000413219 TKTL1P51854 596 aa17.81■□□□□ 0.44
SDCBP-202ENST00000413219 ARHGAP1Q07960 439 aa17.81■□□□□ 0.44
SDCBP-202ENST00000413219 FASTKQ14296 549 aaKnown RBP17.81■□□□□ 0.44
SDCBP-202ENST00000413219 NHSL2Q5HYW2 709 aa17.81■□□□□ 0.44
SDCBP-202ENST00000413219 PCID2Q5JVF3 399 aa17.81■□□□□ 0.44
SDCBP-202ENST00000413219 HMBOX1Q6NT76 420 aa17.81■□□□□ 0.44
SDCBP-202ENST00000413219 C8orf82Q6P1X6 216 aaPredicted RBP17.81■□□□□ 0.44
SDCBP-202ENST00000413219 PKN3Q6P5Z2 889 aa17.81■□□□□ 0.44
SDCBP-202ENST00000413219 TRIM67Q6ZTA4 783 aa17.81■□□□□ 0.44
SDCBP-202ENST00000413219 TXNDC5Q8NBS9 432 aaKnown RBP17.81■□□□□ 0.44
SDCBP-202ENST00000413219 CCDC126Q96EE4 140 aa17.81■□□□□ 0.44
SDCBP-202ENST00000413219 SLC25A23Q9BV35 468 aa17.81■□□□□ 0.44
SDCBP-202ENST00000413219 ARMC1Q9NVT9 282 aa17.81■□□□□ 0.44
SDCBP-202ENST00000413219 GTSE1Q9NYZ3 720 aa17.81■□□□□ 0.44
SDCBP-202ENST00000413219 TMEM181Q9P2C4 612 aa17.81■□□□□ 0.44
SDCBP-202ENST00000413219 CNOT6Q9ULM6 557 aaKnown RBP17.81■□□□□ 0.44
SDCBP-202ENST00000413219 A0A087WXM4 84 aa17.81■□□□□ 0.44
SDCBP-202ENST00000413219 PRORSD1PA6NEY8 169 aa17.81■□□□□ 0.44
SDCBP-202ENST00000413219 UBDO15205 165 aa17.81■□□□□ 0.44
SDCBP-202ENST00000413219 STAMBPO95630 424 aa17.81■□□□□ 0.44
SDCBP-202ENST00000413219 SNRPB2P08579 225 aaKnown RBP17.81■□□□□ 0.44
SDCBP-202ENST00000413219 HSPA8P11142 646 aaKnown RBP17.81■□□□□ 0.44
SDCBP-202ENST00000413219 PNPLA4P41247 253 aa17.81■□□□□ 0.44
SDCBP-202ENST00000413219 SCNN1BP51168 640 aa17.81■□□□□ 0.44
SDCBP-202ENST00000413219 NDST2P52849 883 aa17.81■□□□□ 0.44
SDCBP-202ENST00000413219 LAMC2Q13753 1193 aa17.81■□□□□ 0.44
SDCBP-202ENST00000413219 SYPL2Q5VXT5 272 aa17.81■□□□□ 0.44
SDCBP-202ENST00000413219 SLC27A1Q6PCB7 646 aa17.81■□□□□ 0.44
SDCBP-202ENST00000413219 KLHL35Q6PF15 583 aa17.81■□□□□ 0.44
SDCBP-202ENST00000413219 CNSTQ6PJW8 725 aa17.81■□□□□ 0.44
SDCBP-202ENST00000413219 ALKAL1Q6UXT8 129 aa17.81■□□□□ 0.44
SDCBP-202ENST00000413219 ZBTB49Q6ZSB9 765 aa17.81■□□□□ 0.44
SDCBP-202ENST00000413219 ZNF554Q86TJ5 538 aa17.81■□□□□ 0.44
SDCBP-202ENST00000413219 MYO1HQ8N1T3 1032 aa17.81■□□□□ 0.44
SDCBP-202ENST00000413219 NPWQ8N729 165 aa17.81■□□□□ 0.44
SDCBP-202ENST00000413219 MFSD2AQ8NA29 543 aa17.81■□□□□ 0.44
SDCBP-202ENST00000413219 ADAMTS16Q8TE57 1224 aa17.81■□□□□ 0.44
SDCBP-202ENST00000413219 RANBP9Q96S59 729 aa17.81■□□□□ 0.44
SDCBP-202ENST00000413219 POMKQ9H5K3 350 aa17.81■□□□□ 0.44
SDCBP-202ENST00000413219 EML4Q9HC35 981 aaKnown RBP17.81■□□□□ 0.44
SDCBP-202ENST00000413219 DUS2Q9NX74 493 aaKnown RBP17.81■□□□□ 0.44
SDCBP-202ENST00000413219 PIM2Q9P1W9 311 aa17.81■□□□□ 0.44
SDCBP-202ENST00000413219 CROTQ9UKG9 612 aa17.81■□□□□ 0.44
SDCBP-202ENST00000413219 MAGED2Q9UNF1 606 aaPredicted RBP17.81■□□□□ 0.44
SDCBP-202ENST00000413219 CACNG3O60359 315 aa17.8■□□□□ 0.44
SDCBP-202ENST00000413219 SRP72O76094 671 aaKnown RBP17.8■□□□□ 0.44
SDCBP-202ENST00000413219 ATP4BP51164 291 aa17.8■□□□□ 0.44
SDCBP-202ENST00000413219 ESRRGP62508 458 aa17.8■□□□□ 0.44
SDCBP-202ENST00000413219 TMED1Q13445 227 aa17.8■□□□□ 0.44
SDCBP-202ENST00000413219 AGKQ53H12 422 aa17.8■□□□□ 0.44
SDCBP-202ENST00000413219 C6orf10Q5SRN2 563 aa17.8■□□□□ 0.44
SDCBP-202ENST00000413219 TRIM74Q86UV6 250 aa17.8■□□□□ 0.44
SDCBP-202ENST00000413219 TRIM73Q86UV7 250 aa17.8■□□□□ 0.44
SDCBP-202ENST00000413219 CEP97Q8IW35 865 aa17.8■□□□□ 0.44
SDCBP-202ENST00000413219 CCDC117Q8IWD4 279 aaPredicted RBP17.8■□□□□ 0.44
SDCBP-202ENST00000413219 APPL2Q8NEU8 664 aa17.8■□□□□ 0.44
SDCBP-202ENST00000413219 TFAP2CQ92754 450 aa17.8■□□□□ 0.44
SDCBP-202ENST00000413219 DPF3Q92784 378 aa17.8■□□□□ 0.44
SDCBP-202ENST00000413219 TSGA13Q96PP4 275 aa17.8■□□□□ 0.44
SDCBP-202ENST00000413219 OSBPL6Q9BZF3 934 aa17.8■□□□□ 0.44
SDCBP-202ENST00000413219 UPF3AQ9H1J1 476 aaKnown RBP17.8■□□□□ 0.44
SDCBP-202ENST00000413219 R3HDMLQ9H3Y0 253 aa17.8■□□□□ 0.44
SDCBP-202ENST00000413219 WDR6Q9NNW5 1121 aaKnown RBP17.8■□□□□ 0.44
SDCBP-202ENST00000413219 RRN3Q9NYV6 651 aa17.8■□□□□ 0.44
SDCBP-202ENST00000413219 FBXW11Q9UKB1 542 aa17.8■□□□□ 0.44
SDCBP-202ENST00000413219 TSC2P49815 1807 aa17.8■□□□□ 0.44
SDCBP-202ENST00000413219 MRASO14807 208 aa17.79■□□□□ 0.44
SDCBP-202ENST00000413219 NPR3P17342 541 aa17.79■□□□□ 0.44
SDCBP-202ENST00000413219 GJA9P57773 515 aa17.79■□□□□ 0.44
SDCBP-202ENST00000413219 ZNF33AQ06730 810 aa17.79■□□□□ 0.44
SDCBP-202ENST00000413219 GALNT1Q10472 559 aaPredicted RBP17.79■□□□□ 0.44
SDCBP-202ENST00000413219 KCTD2Q14681 263 aa17.79■□□□□ 0.44
SDCBP-202ENST00000413219 ACBD5Q5T8D3 534 aaPredicted RBP17.79■□□□□ 0.44
SDCBP-202ENST00000413219 DHFR2Q86XF0 187 aa17.79■□□□□ 0.44
SDCBP-202ENST00000413219 SIX6OS1Q8N1H7 587 aa17.79■□□□□ 0.44
SDCBP-202ENST00000413219 B3GALNT2Q8NCR0 500 aa17.79■□□□□ 0.44
SDCBP-202ENST00000413219 TNIP2Q8NFZ5 429 aa17.79■□□□□ 0.44
SDCBP-202ENST00000413219 PTCD2Q8WV60 388 aaKnown RBP17.79■□□□□ 0.44
SDCBP-202ENST00000413219 TCF12Q99081 682 aa17.79■□□□□ 0.44
SDCBP-202ENST00000413219 CIB1Q99828 191 aa17.79■□□□□ 0.44
SDCBP-202ENST00000413219 PDGFCQ9NRA1 345 aa17.79■□□□□ 0.44
SDCBP-202ENST00000413219 FAF1Q9UNN5 650 aaPredicted RBP17.79■□□□□ 0.44
SDCBP-202ENST00000413219 GJA3Q9Y6H8 435 aa17.79■□□□□ 0.44
SDCBP-202ENST00000413219 TNS1Q9HBL0 1735 aaKnown RBP17.79■□□□□ 0.44
SDCBP-202ENST00000413219 SH3PXD2BA1X283 911 aa17.79■□□□□ 0.44
SDCBP-202ENST00000413219 FGFR3P22607 806 aa17.79■□□□□ 0.44
SDCBP-202ENST00000413219 HOXA11P31270 313 aaPredicted RBP17.79■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms