RNA–Protein interactions for RNA: ENST00000410457.1

RNU2-28P-201, Transcript of RNA, U2 small nuclear 28, pseudogene, humanhuman

BASIC

Gene RNU2-28P, Length 189 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU2-28P-201ENST00000410457 IPO7O95373 1038 aaKnown RBP4.27□□□□□ -1.73
RNU2-28P-201ENST00000410457 PGM3O95394 542 aa4.27□□□□□ -1.73
RNU2-28P-201ENST00000410457 TFP02787 698 aa4.27□□□□□ -1.73
RNU2-28P-201ENST00000410457 NR2F1P10589 423 aa4.27□□□□□ -1.73
RNU2-28P-201ENST00000410457 PCNAP12004 261 aa4.27□□□□□ -1.73
RNU2-28P-201ENST00000410457 RARGP13631 454 aa4.27□□□□□ -1.73
RNU2-28P-201ENST00000410457 C6P13671 934 aa4.27□□□□□ -1.73
RNU2-28P-201ENST00000410457 ACSL1P33121 698 aa4.27□□□□□ -1.73
RNU2-28P-201ENST00000410457 RYKP34925 604 aa4.27□□□□□ -1.73
RNU2-28P-201ENST00000410457 UBA7P41226 1012 aa4.27□□□□□ -1.73
RNU2-28P-201ENST00000410457 GARSP41250 739 aaKnown RBP4.27□□□□□ -1.73
RNU2-28P-201ENST00000410457 DPP6P42658 865 aa4.27□□□□□ -1.73
RNU2-28P-201ENST00000410457 GNAQP50148 359 aa4.27□□□□□ -1.73
RNU2-28P-201ENST00000410457 HDAC4P56524 1084 aa4.27□□□□□ -1.73
RNU2-28P-201ENST00000410457 KRTAP10-2P60368 255 aa4.27□□□□□ -1.73
RNU2-28P-201ENST00000410457 PMPCAQ10713 525 aa4.27□□□□□ -1.73
RNU2-28P-201ENST00000410457 OLIG2Q13516 323 aa4.27□□□□□ -1.73
RNU2-28P-201ENST00000410457 PKP1Q13835 747 aa4.27□□□□□ -1.73
RNU2-28P-201ENST00000410457 BECN1Q14457 450 aa4.27□□□□□ -1.73
RNU2-28P-201ENST00000410457 ZNF268Q14587 947 aaPredicted RBP4.27□□□□□ -1.73
RNU2-28P-201ENST00000410457 VEPH1Q14D04 833 aa4.27□□□□□ -1.73
RNU2-28P-201ENST00000410457 ALG10Q5BKT4 473 aa4.27□□□□□ -1.73
RNU2-28P-201ENST00000410457 FAM133BQ5BKY9 247 aaKnown RBP4.27□□□□□ -1.73
RNU2-28P-201ENST00000410457 ALG10BQ5I7T1 473 aa4.27□□□□□ -1.73
RNU2-28P-201ENST00000410457 NCAPH2Q6IBW4 605 aa4.27□□□□□ -1.73
RNU2-28P-201ENST00000410457 PDXDC1Q6P996 788 aa4.27□□□□□ -1.73
RNU2-28P-201ENST00000410457 TMCO3Q6UWJ1 677 aa4.27□□□□□ -1.73
RNU2-28P-201ENST00000410457 KDELC2Q7Z4H8 507 aa4.27□□□□□ -1.73
RNU2-28P-201ENST00000410457 TRIM74Q86UV6 250 aa4.27□□□□□ -1.73
RNU2-28P-201ENST00000410457 TRIM73Q86UV7 250 aa4.27□□□□□ -1.73
RNU2-28P-201ENST00000410457 DDIASQ8IXT1 998 aa4.27□□□□□ -1.73
RNU2-28P-201ENST00000410457 FAM185AQ8N0U4 392 aa4.27□□□□□ -1.73
RNU2-28P-201ENST00000410457 TAGAPQ8N103 731 aa4.27□□□□□ -1.73
RNU2-28P-201ENST00000410457 Q8N1X5 172 aa4.27□□□□□ -1.73
RNU2-28P-201ENST00000410457 SEMA6DQ8NFY4 1073 aa4.27□□□□□ -1.73
RNU2-28P-201ENST00000410457 CCDC34Q96HJ3 373 aa4.27□□□□□ -1.73
RNU2-28P-201ENST00000410457 PGAM5Q96HS1 289 aa4.27□□□□□ -1.73
RNU2-28P-201ENST00000410457 MAK16Q9BXY0 300 aaKnown RBP4.27□□□□□ -1.73
RNU2-28P-201ENST00000410457 FTOQ9C0B1 505 aaKnown RBP eCLIP4.27□□□□□ -1.73
RNU2-28P-201ENST00000410457 SMARCAD1Q9H4L7 1026 aa4.27□□□□□ -1.73
RNU2-28P-201ENST00000410457 SPATS2LQ9NUQ6 558 aaKnown RBP4.27□□□□□ -1.73
RNU2-28P-201ENST00000410457 ABI3Q9P2A4 366 aa4.27□□□□□ -1.73
RNU2-28P-201ENST00000410457 LAMP3Q9UQV4 416 aa4.27□□□□□ -1.73
RNU2-28P-201ENST00000410457 MTMR6Q9Y217 621 aa4.27□□□□□ -1.73
RNU2-28P-201ENST00000410457 UTYO14607 1347 aa4.26□□□□□ -1.73
RNU2-28P-201ENST00000410457 F8W810 466 aa4.26□□□□□ -1.73
RNU2-28P-201ENST00000410457 RHODO00212 210 aa4.26□□□□□ -1.73
RNU2-28P-201ENST00000410457 MT-CYBP00156 380 aaPredicted RBP4.26□□□□□ -1.73
RNU2-28P-201ENST00000410457 UNGP13051 313 aaPredicted RBP4.26□□□□□ -1.73
RNU2-28P-201ENST00000410457 IL11P20809 199 aa4.26□□□□□ -1.73
RNU2-28P-201ENST00000410457 KRT20P35900 424 aa4.26□□□□□ -1.73
RNU2-28P-201ENST00000410457 SLC16A2P36021 539 aa4.26□□□□□ -1.73
RNU2-28P-201ENST00000410457 GPR12P47775 334 aa4.26□□□□□ -1.73
RNU2-28P-201ENST00000410457 PIP4K2AP48426 406 aaPredicted RBP4.26□□□□□ -1.73
RNU2-28P-201ENST00000410457 INHBCP55103 352 aa4.26□□□□□ -1.73
RNU2-28P-201ENST00000410457 CDH8P55286 799 aa4.26□□□□□ -1.73
RNU2-28P-201ENST00000410457 SNX16P57768 344 aa4.26□□□□□ -1.73
RNU2-28P-201ENST00000410457 STK4Q13043 487 aa4.26□□□□□ -1.73
RNU2-28P-201ENST00000410457 FRG1Q14331 258 aaKnown RBP4.26□□□□□ -1.73
RNU2-28P-201ENST00000410457 SHBQ15464 509 aa4.26□□□□□ -1.73
RNU2-28P-201ENST00000410457 SLC9C1Q4G0N8 1177 aa4.26□□□□□ -1.73
RNU2-28P-201ENST00000410457 CPLX2Q6PUV4 134 aaKnown RBP4.26□□□□□ -1.73
RNU2-28P-201ENST00000410457 TSSK4Q6SA08 328 aa4.26□□□□□ -1.73
RNU2-28P-201ENST00000410457 FAM83HQ6ZRV2 1179 aaPredicted RBP4.26□□□□□ -1.73
RNU2-28P-201ENST00000410457 FAM57BQ71RH2 274 aa4.26□□□□□ -1.73
RNU2-28P-201ENST00000410457 CHST9Q7L1S5 443 aa4.26□□□□□ -1.73
RNU2-28P-201ENST00000410457 PRPF39Q86UA1 669 aaKnown RBP4.26□□□□□ -1.73
RNU2-28P-201ENST00000410457 TBC1D26Q86UD7 250 aa4.26□□□□□ -1.73
RNU2-28P-201ENST00000410457 TICAM1Q8IUC6 712 aa4.26□□□□□ -1.73
RNU2-28P-201ENST00000410457 ADGRF4Q8IZF3 695 aa4.26□□□□□ -1.73
RNU2-28P-201ENST00000410457 CADM3Q8N126 398 aa4.26□□□□□ -1.73
RNU2-28P-201ENST00000410457 FAM98AQ8NCA5 519 aaKnown RBP4.26□□□□□ -1.73
RNU2-28P-201ENST00000410457 HASPINQ8TF76 798 aa4.26□□□□□ -1.73
RNU2-28P-201ENST00000410457 MMABQ96EY8 250 aaPredicted RBP4.26□□□□□ -1.73
RNU2-28P-201ENST00000410457 WDFY2Q96P53 400 aa4.26□□□□□ -1.73
RNU2-28P-201ENST00000410457 SLF1Q9BQI6 1058 aa4.26□□□□□ -1.73
RNU2-28P-201ENST00000410457 IKZF4Q9H2S9 585 aa4.26□□□□□ -1.73
RNU2-28P-201ENST00000410457 POLR1BQ9H9Y6 1135 aa4.26□□□□□ -1.73
RNU2-28P-201ENST00000410457 DLGAP2Q9P1A6 1054 aa4.26□□□□□ -1.73
RNU2-28P-201ENST00000410457 AGO2Q9UKV8 859 aaKnown RBP4.26□□□□□ -1.73
RNU2-28P-201ENST00000410457 PCDHGB4Q9UN71 923 aa4.26□□□□□ -1.73
RNU2-28P-201ENST00000410457 SESN1Q9Y6P5 492 aa4.26□□□□□ -1.73
RNU2-28P-201ENST00000410457 A0A096LPK6 155 aa4.25□□□□□ -1.73
RNU2-28P-201ENST00000410457 KIR2DS5A0A0G2JLQ3 304 aa4.25□□□□□ -1.73
RNU2-28P-201ENST00000410457 SYNDIG1LA6NDD5 238 aa4.25□□□□□ -1.73
RNU2-28P-201ENST00000410457 CDRT15L2A8MXV6 281 aa4.25□□□□□ -1.73
RNU2-28P-201ENST00000410457 NPIPB11E5RHQ5 1161 aa4.25□□□□□ -1.73
RNU2-28P-201ENST00000410457 KIR2DS3K7RE56 304 aa4.25□□□□□ -1.73
RNU2-28P-201ENST00000410457 P4HA2O15460 535 aa4.25□□□□□ -1.73
RNU2-28P-201ENST00000410457 PRPF4O43172 522 aaKnown RBP eCLIP4.25□□□□□ -1.73
RNU2-28P-201ENST00000410457 GJB3O75712 270 aa4.25□□□□□ -1.73
RNU2-28P-201ENST00000410457 TOP3BO95985 862 aaKnown RBP4.25□□□□□ -1.73
RNU2-28P-201ENST00000410457 ADRB2P07550 413 aa4.25□□□□□ -1.73
RNU2-28P-201ENST00000410457 CTPS1P17812 591 aa4.25□□□□□ -1.73
RNU2-28P-201ENST00000410457 BMP5P22003 454 aa4.25□□□□□ -1.73
RNU2-28P-201ENST00000410457 NNMTP40261 264 aa4.25□□□□□ -1.73
RNU2-28P-201ENST00000410457 ELLP55199 621 aaPredicted RBP4.25□□□□□ -1.73
RNU2-28P-201ENST00000410457 CLDN2P57739 230 aa4.25□□□□□ -1.73
RNU2-28P-201ENST00000410457 CEBPZQ03701 1054 aaKnown RBP4.25□□□□□ -1.73
RNU2-28P-201ENST00000410457 CALD1Q05682 793 aaKnown RBP4.25□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms