RNA–Protein interactions for RNA: ENST00000409219.5

CHRNA1-203, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 3 BASIC

Gene CHRNA1, Length 1,466 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-203ENST00000409219 TSPAN6O43657 245 aa13.06□□□□□ -0.32
CHRNA1-203ENST00000409219 PAGE1O75459 146 aa13.06□□□□□ -0.32
CHRNA1-203ENST00000409219 PFKFB1P16118 471 aa13.06□□□□□ -0.32
CHRNA1-203ENST00000409219 CCNHP51946 323 aaPredicted RBP13.06□□□□□ -0.32
CHRNA1-203ENST00000409219 YPEL5P62699 121 aa13.06□□□□□ -0.32
CHRNA1-203ENST00000409219 DPYDQ12882 1025 aa13.06□□□□□ -0.32
CHRNA1-203ENST00000409219 ELOCQ15369 112 aa13.06□□□□□ -0.32
CHRNA1-203ENST00000409219 FOXD4L5Q5VV16 416 aaPredicted RBP13.06□□□□□ -0.32
CHRNA1-203ENST00000409219 DENND1BQ6P3S1 775 aa13.06□□□□□ -0.32
CHRNA1-203ENST00000409219 VPS36Q86VN1 386 aa13.06□□□□□ -0.32
CHRNA1-203ENST00000409219 SLITRK4Q8IW52 837 aa13.06□□□□□ -0.32
CHRNA1-203ENST00000409219 PPM1KQ8N3J5 372 aa13.06□□□□□ -0.32
CHRNA1-203ENST00000409219 FOXD4L4Q8WXT5 416 aaPredicted RBP13.06□□□□□ -0.32
CHRNA1-203ENST00000409219 SLC35C1Q96A29 364 aa13.06□□□□□ -0.32
CHRNA1-203ENST00000409219 CCDC47Q96A33 483 aaKnown RBP13.06□□□□□ -0.32
CHRNA1-203ENST00000409219 HEPHQ9BQS7 1158 aa13.06□□□□□ -0.32
CHRNA1-203ENST00000409219 PLEKHB1Q9UF11 243 aaPredicted RBP13.06□□□□□ -0.32
CHRNA1-203ENST00000409219 GPR34Q9UPC5 381 aa13.06□□□□□ -0.32
CHRNA1-203ENST00000409219 RNF215Q9Y6U7 377 aa13.06□□□□□ -0.32
CHRNA1-203ENST00000409219 ITPR2Q14571 2701 aa13.06□□□□□ -0.32
CHRNA1-203ENST00000409219 DOCK4Q8N1I0 1966 aa13.06□□□□□ -0.32
CHRNA1-203ENST00000409219 A0A1B0GVL5 298 aa13.05□□□□□ -0.32
CHRNA1-203ENST00000409219 STMND1H3BQB6 276 aa13.05□□□□□ -0.32
CHRNA1-203ENST00000409219 ADCY5O95622 1261 aa13.05□□□□□ -0.32
CHRNA1-203ENST00000409219 ALPIP09923 528 aa13.05□□□□□ -0.32
CHRNA1-203ENST00000409219 EIF4A3P38919 411 aaKnown RBP13.05□□□□□ -0.32
CHRNA1-203ENST00000409219 ARSDP51689 593 aa13.05□□□□□ -0.32
CHRNA1-203ENST00000409219 HK3P52790 923 aa13.05□□□□□ -0.32
CHRNA1-203ENST00000409219 CDK17Q00537 523 aa13.05□□□□□ -0.32
CHRNA1-203ENST00000409219 C16orf72Q14CZ0 275 aa13.05□□□□□ -0.32
CHRNA1-203ENST00000409219 LVRNQ6Q4G3 990 aa13.05□□□□□ -0.32
CHRNA1-203ENST00000409219 TMEM110Q86TL2 294 aa13.05□□□□□ -0.32
CHRNA1-203ENST00000409219 SMYD4Q8IYR2 804 aaPredicted RBP13.05□□□□□ -0.32
CHRNA1-203ENST00000409219 DEFB106AQ8N104 65 aa13.05□□□□□ -0.32
CHRNA1-203ENST00000409219 PCDH20Q8N6Y1 951 aaKnown RBP13.05□□□□□ -0.32
CHRNA1-203ENST00000409219 Q8N9G6 341 aaPredicted RBP13.05□□□□□ -0.32
CHRNA1-203ENST00000409219 OR7D4Q8NG98 312 aa13.05□□□□□ -0.32
CHRNA1-203ENST00000409219 OR6C4Q8NGE1 309 aa13.05□□□□□ -0.32
CHRNA1-203ENST00000409219 C9orf43Q8TAL5 461 aaPredicted RBP13.05□□□□□ -0.32
CHRNA1-203ENST00000409219 STK32AQ8WU08 396 aa13.05□□□□□ -0.32
CHRNA1-203ENST00000409219 SCG3Q8WXD2 468 aaKnown RBP13.05□□□□□ -0.32
CHRNA1-203ENST00000409219 MIB2Q96AX9 1013 aa13.05□□□□□ -0.32
CHRNA1-203ENST00000409219 NT5C1BQ96P26 610 aa13.05□□□□□ -0.32
CHRNA1-203ENST00000409219 SLC2A13Q96QE2 648 aa13.05□□□□□ -0.32
CHRNA1-203ENST00000409219 EDEM3Q9BZQ6 932 aa13.05□□□□□ -0.32
CHRNA1-203ENST00000409219 ZDHHC6Q9H6R6 413 aa13.05□□□□□ -0.32
CHRNA1-203ENST00000409219 ZNF71Q9NQZ8 489 aaPredicted RBP13.05□□□□□ -0.32
CHRNA1-203ENST00000409219 MBNL1Q9NR56 388 aaKnown RBP13.05□□□□□ -0.32
CHRNA1-203ENST00000409219 USP25Q9UHP3 1055 aa13.05□□□□□ -0.32
CHRNA1-203ENST00000409219 C16orf96A6NNT2 1141 aa13.04□□□□□ -0.32
CHRNA1-203ENST00000409219 NEMP1O14524 444 aa13.04□□□□□ -0.32
CHRNA1-203ENST00000409219 SLC16A3O15427 465 aaKnown RBP13.04□□□□□ -0.32
CHRNA1-203ENST00000409219 LIFP15018 202 aa13.04□□□□□ -0.32
CHRNA1-203ENST00000409219 CCR10P46092 362 aa13.04□□□□□ -0.32
CHRNA1-203ENST00000409219 SERPINH1P50454 418 aaKnown RBP13.04□□□□□ -0.32
CHRNA1-203ENST00000409219 BLKP51451 505 aa13.04□□□□□ -0.32
CHRNA1-203ENST00000409219 ALG11Q2TAA5 492 aa13.04□□□□□ -0.32
CHRNA1-203ENST00000409219 NYAP1Q6ZVC0 841 aa13.04□□□□□ -0.32
CHRNA1-203ENST00000409219 SPRED1Q7Z699 444 aa13.04□□□□□ -0.32
CHRNA1-203ENST00000409219 TFAP2DQ7Z6R9 452 aa13.04□□□□□ -0.32
CHRNA1-203ENST00000409219 SETD3Q86TU7 594 aaPredicted RBP13.04□□□□□ -0.32
CHRNA1-203ENST00000409219 HID1Q8IV36 788 aa13.04□□□□□ -0.32
CHRNA1-203ENST00000409219 ZNF683Q8IZ20 524 aa13.04□□□□□ -0.32
CHRNA1-203ENST00000409219 TP53I13Q8NBR0 393 aaPredicted RBP13.04□□□□□ -0.32
CHRNA1-203ENST00000409219 GPR156Q8NFN8 814 aa13.04□□□□□ -0.32
CHRNA1-203ENST00000409219 NKD1Q969G9 470 aa13.04□□□□□ -0.32
CHRNA1-203ENST00000409219 PMEPA1Q969W9 287 aa13.04□□□□□ -0.32
CHRNA1-203ENST00000409219 TSACCQ96A04 125 aaPredicted RBP13.04□□□□□ -0.32
CHRNA1-203ENST00000409219 RAB7BQ96AH8 199 aa13.04□□□□□ -0.32
CHRNA1-203ENST00000409219 VOPP1Q96AW1 172 aa13.04□□□□□ -0.32
CHRNA1-203ENST00000409219 MED15Q96RN5 788 aa13.04□□□□□ -0.32
CHRNA1-203ENST00000409219 CEP44Q9C0F1 390 aa13.04□□□□□ -0.32
CHRNA1-203ENST00000409219 B3GNT4Q9C0J1 378 aa13.04□□□□□ -0.32
CHRNA1-203ENST00000409219 SIK2Q9H0K1 926 aa13.04□□□□□ -0.32
CHRNA1-203ENST00000409219 ANLNQ9NQW6 1124 aa13.04□□□□□ -0.32
CHRNA1-203ENST00000409219 APPL1Q9UKG1 709 aa13.04□□□□□ -0.32
CHRNA1-203ENST00000409219 CACNA1DQ01668 2161 aa13.04□□□□□ -0.32
CHRNA1-203ENST00000409219 I6L893 689 aaPredicted RBP13.04□□□□□ -0.32
CHRNA1-203ENST00000409219 ZMPSTE24O75844 475 aa13.04□□□□□ -0.32
CHRNA1-203ENST00000409219 CCL4P13236 92 aa13.04□□□□□ -0.32
CHRNA1-203ENST00000409219 CTSEP14091 401 aa13.04□□□□□ -0.32
CHRNA1-203ENST00000409219 GKP32189 559 aa13.04□□□□□ -0.32
CHRNA1-203ENST00000409219 CD97P48960 835 aa13.04□□□□□ -0.32
CHRNA1-203ENST00000409219 ATP1A2P50993 1020 aa13.04□□□□□ -0.32
CHRNA1-203ENST00000409219 DNA2P51530 1060 aa13.04□□□□□ -0.32
CHRNA1-203ENST00000409219 ARF5P84085 180 aa13.04□□□□□ -0.32
CHRNA1-203ENST00000409219 NME3Q13232 169 aa13.04□□□□□ -0.32
CHRNA1-203ENST00000409219 MTA1Q13330 715 aa13.04□□□□□ -0.32
CHRNA1-203ENST00000409219 PDCLQ13371 301 aa13.04□□□□□ -0.32
CHRNA1-203ENST00000409219 CARD16Q5EG05 197 aa13.04□□□□□ -0.32
CHRNA1-203ENST00000409219 PHF19Q5T6S3 580 aa13.04□□□□□ -0.32
CHRNA1-203ENST00000409219 OTUD1Q5VV17 481 aaPredicted RBP13.04□□□□□ -0.32
CHRNA1-203ENST00000409219 OR6K2Q8NGY2 324 aa13.04□□□□□ -0.32
CHRNA1-203ENST00000409219 TM6SF2Q9BZW4 377 aa13.04□□□□□ -0.32
CHRNA1-203ENST00000409219 SEMA6CQ9H3T2 930 aa13.04□□□□□ -0.32
CHRNA1-203ENST00000409219 HPSEQ9Y251 543 aa13.04□□□□□ -0.32
CHRNA1-203ENST00000409219 FCF1Q9Y324 198 aaKnown RBP13.04□□□□□ -0.32
CHRNA1-203ENST00000409219 ACTL7AQ9Y615 435 aa13.04□□□□□ -0.32
CHRNA1-203ENST00000409219 CSMD1Q96PZ7 3565 aa13.03□□□□□ -0.32
CHRNA1-203ENST00000409219 AREL1O15033 823 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms