RNA–Protein interactions for RNA: ENST00000403461.5

CEACAM1-208, Transcript of carcinoembryonic antigen related cell adhesion molecule 1, human

TSL 1 (best) BASIC

Gene CEACAM1, Length 1,263 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CEACAM1-208	ENST00000403461	ITGA1	P56199	1179 aa		7.07	□□□□□ -1.28
CEACAM1-208	ENST00000403461	CT47A1	Q5JQC4	288 aa	Predicted RBP	7.07	□□□□□ -1.28
CEACAM1-208	ENST00000403461	SNX30	Q5VWJ9	437 aa		7.07	□□□□□ -1.28
CEACAM1-208	ENST00000403461	VASN	Q6EMK4	673 aa		7.07	□□□□□ -1.28
CEACAM1-208	ENST00000403461	TMEM25	Q86YD3	366 aa		7.07	□□□□□ -1.28
CEACAM1-208	ENST00000403461	CBWD2	Q8IUF1	395 aa		7.07	□□□□□ -1.28
CEACAM1-208	ENST00000403461	SLC41A1	Q8IVJ1	513 aa		7.07	□□□□□ -1.28
CEACAM1-208	ENST00000403461	LRRC56	Q8IYG6	542 aa	Predicted RBP	7.07	□□□□□ -1.28
CEACAM1-208	ENST00000403461	ZCCHC9	Q8N567	271 aa	Known RBP	7.07	□□□□□ -1.28
CEACAM1-208	ENST00000403461	KY	Q8NBH2	561 aa		7.07	□□□□□ -1.28
CEACAM1-208	ENST00000403461	OR5B17	Q8NGF7	314 aa		7.07	□□□□□ -1.28
CEACAM1-208	ENST00000403461	MDM1	Q8TC05	714 aa		7.07	□□□□□ -1.28
CEACAM1-208	ENST00000403461	FNIP1	Q8TF40	1166 aa		7.07	□□□□□ -1.28
CEACAM1-208	ENST00000403461	SYAP1	Q96A49	352 aa	Predicted RBP	7.07	□□□□□ -1.28
CEACAM1-208	ENST00000403461	CCDC127	Q96BQ5	260 aa		7.07	□□□□□ -1.28
CEACAM1-208	ENST00000403461	EPSTI1	Q96J88	318 aa		7.07	□□□□□ -1.28
CEACAM1-208	ENST00000403461	MRGPRX1	Q96LB2	322 aa		7.07	□□□□□ -1.28
CEACAM1-208	ENST00000403461	PWWP2A	Q96N64	755 aa		7.07	□□□□□ -1.28
CEACAM1-208	ENST00000403461	CGRRF1	Q99675	332 aa		7.07	□□□□□ -1.28
CEACAM1-208	ENST00000403461	KRTAP4-2	Q9BYR5	136 aa		7.07	□□□□□ -1.28
CEACAM1-208	ENST00000403461	DNAI2	Q9GZS0	605 aa		7.07	□□□□□ -1.28
CEACAM1-208	ENST00000403461	GAREM1	Q9H706	876 aa		7.07	□□□□□ -1.28
CEACAM1-208	ENST00000403461	PRDM16	Q9HAZ2	1276 aa		7.07	□□□□□ -1.28
CEACAM1-208	ENST00000403461	ACSS2	Q9NR19	701 aa		7.07	□□□□□ -1.28
CEACAM1-208	ENST00000403461	TLR8	Q9NR97	1041 aa	Known RBP	7.07	□□□□□ -1.28
CEACAM1-208	ENST00000403461	OXSM	Q9NWU1	459 aa		7.07	□□□□□ -1.28
CEACAM1-208	ENST00000403461	RAD54B	Q9Y620	910 aa		7.07	□□□□□ -1.28
CEACAM1-208	ENST00000403461	FASN	P49327	2511 aa	Known RBP	7.07	□□□□□ -1.28
CEACAM1-208	ENST00000403461	PTPRJ	Q12913	1337 aa		7.06	□□□□□ -1.28
CEACAM1-208	ENST00000403461	ASPM	Q8IZT6	3477 aa		7.06	□□□□□ -1.28
CEACAM1-208	ENST00000403461	VPS37C	A5D8V6	355 aa	Predicted RBP	7.06	□□□□□ -1.28
CEACAM1-208	ENST00000403461	CLDN5	O00501	218 aa		7.06	□□□□□ -1.28
CEACAM1-208	ENST00000403461	BCAT2	O15382	392 aa	Predicted RBP	7.06	□□□□□ -1.28
CEACAM1-208	ENST00000403461	TLR5	O60602	858 aa		7.06	□□□□□ -1.28
CEACAM1-208	ENST00000403461	GJB3	O75712	270 aa		7.06	□□□□□ -1.28
CEACAM1-208	ENST00000403461	ATP5C1	P36542	298 aa	Known RBP	7.06	□□□□□ -1.28
CEACAM1-208	ENST00000403461	AFF3	P51826	1226 aa	Known RBP	7.06	□□□□□ -1.28
CEACAM1-208	ENST00000403461	CDH8	P55286	799 aa		7.06	□□□□□ -1.28
CEACAM1-208	ENST00000403461	SNRPF	P62306	86 aa	Known RBP	7.06	□□□□□ -1.28
CEACAM1-208	ENST00000403461	OCRL	Q01968	901 aa		7.06	□□□□□ -1.28
CEACAM1-208	ENST00000403461	BIRC3	Q13489	604 aa		7.06	□□□□□ -1.28
CEACAM1-208	ENST00000403461	SNRNP35	Q16560	246 aa	Known RBP	7.06	□□□□□ -1.28
CEACAM1-208	ENST00000403461	ZNF699	Q32M78	642 aa		7.06	□□□□□ -1.28
CEACAM1-208	ENST00000403461	LIPI	Q6XZB0	460 aa		7.06	□□□□□ -1.28
CEACAM1-208	ENST00000403461	TPGS1	Q6ZTW0	290 aa		7.06	□□□□□ -1.28
CEACAM1-208	ENST00000403461	HTR3D	Q70Z44	454 aa		7.06	□□□□□ -1.28
CEACAM1-208	ENST00000403461	CHTF18	Q8WVB6	975 aa		7.06	□□□□□ -1.28
CEACAM1-208	ENST00000403461	PRCC	Q92733	491 aa	Predicted RBP	7.06	□□□□□ -1.28
CEACAM1-208	ENST00000403461	DACT3	Q96B18	629 aa	Predicted RBP	7.06	□□□□□ -1.28
CEACAM1-208	ENST00000403461	ZBTB8A	Q96BR9	441 aa		7.06	□□□□□ -1.28
CEACAM1-208	ENST00000403461	ERLEC1	Q96DZ1	483 aa		7.06	□□□□□ -1.28
CEACAM1-208	ENST00000403461	SIPA1	Q96FS4	1042 aa		7.06	□□□□□ -1.28
CEACAM1-208	ENST00000403461	CDK5RAP1	Q96SZ6	601 aa	Known RBP	7.06	□□□□□ -1.28
CEACAM1-208	ENST00000403461	B3GNT5	Q9BYG0	378 aa		7.06	□□□□□ -1.28
CEACAM1-208	ENST00000403461	PCED1A	Q9H1Q7	454 aa		7.06	□□□□□ -1.28
CEACAM1-208	ENST00000403461	DPEP3	Q9H4B8	488 aa		7.06	□□□□□ -1.28
CEACAM1-208	ENST00000403461	TM7SF3	Q9NS93	570 aa		7.06	□□□□□ -1.28
CEACAM1-208	ENST00000403461	USP36	Q9P275	1121 aa	Known RBP	7.06	□□□□□ -1.28
CEACAM1-208	ENST00000403461	DKK4	Q9UBT3	224 aa		7.06	□□□□□ -1.28
CEACAM1-208	ENST00000403461	CHORDC1	Q9UHD1	332 aa	Predicted RBP	7.06	□□□□□ -1.28
CEACAM1-208	ENST00000403461	PCDHGB2	Q9Y5G2	931 aa		7.06	□□□□□ -1.28
CEACAM1-208	ENST00000403461	SPO11	Q9Y5K1	396 aa		7.06	□□□□□ -1.28
CEACAM1-208	ENST00000403461	FRY	Q5TBA9	3013 aa		7.05	□□□□□ -1.28
CEACAM1-208	ENST00000403461	FRMD3	A2A2Y4	597 aa		7.05	□□□□□ -1.28
CEACAM1-208	ENST00000403461	ZNF839	A8K0R7	811 aa		7.05	□□□□□ -1.28
CEACAM1-208	ENST00000403461	PRRT4	C9JH25	899 aa		7.05	□□□□□ -1.28
CEACAM1-208	ENST00000403461		E9PAM4	449 aa		7.05	□□□□□ -1.28
CEACAM1-208	ENST00000403461	EIF3D	O15371	548 aa	Known RBP eCLIP	7.05	□□□□□ -1.28
CEACAM1-208	ENST00000403461	TNFSF14	O43557	240 aa		7.05	□□□□□ -1.28
CEACAM1-208	ENST00000403461	CBFA2T3	O75081	653 aa		7.05	□□□□□ -1.28
CEACAM1-208	ENST00000403461	ZDHHC11B	P0C7U3	371 aa		7.05	□□□□□ -1.28
CEACAM1-208	ENST00000403461	RALA	P11233	206 aa		7.05	□□□□□ -1.28
CEACAM1-208	ENST00000403461	BPI	P17213	487 aa		7.05	□□□□□ -1.28
CEACAM1-208	ENST00000403461	PDC	P20941	246 aa		7.05	□□□□□ -1.28
CEACAM1-208	ENST00000403461	AOAH	P28039	575 aa		7.05	□□□□□ -1.28
CEACAM1-208	ENST00000403461	ABCG1	P45844	678 aa		7.05	□□□□□ -1.28
CEACAM1-208	ENST00000403461	CYP2J2	P51589	502 aa		7.05	□□□□□ -1.28
CEACAM1-208	ENST00000403461	AP3M2	P53677	418 aa		7.05	□□□□□ -1.28
CEACAM1-208	ENST00000403461	CACNA2D1	P54289	1103 aa		7.05	□□□□□ -1.28
CEACAM1-208	ENST00000403461	MYL6	P60660	151 aa		7.05	□□□□□ -1.28
CEACAM1-208	ENST00000403461	AMPD3	Q01432	767 aa		7.05	□□□□□ -1.28
CEACAM1-208	ENST00000403461	ADAM9	Q13443	819 aa		7.05	□□□□□ -1.28
CEACAM1-208	ENST00000403461	PSMD6	Q15008	389 aa		7.05	□□□□□ -1.28
CEACAM1-208	ENST00000403461	HLA-B	Q31612	363 aa		7.05	□□□□□ -1.28
CEACAM1-208	ENST00000403461	FUT11	Q495W5	492 aa		7.05	□□□□□ -1.28
CEACAM1-208	ENST00000403461	ZNF667	Q5HYK9	610 aa		7.05	□□□□□ -1.28
CEACAM1-208	ENST00000403461	CATSPERE	Q5SY80	951 aa		7.05	□□□□□ -1.28
CEACAM1-208	ENST00000403461	DCAF12L1	Q5VU92	463 aa		7.05	□□□□□ -1.28
CEACAM1-208	ENST00000403461	ANKS1B	Q7Z6G8	1248 aa		7.05	□□□□□ -1.28
CEACAM1-208	ENST00000403461	STK32C	Q86UX6	486 aa		7.05	□□□□□ -1.28
CEACAM1-208	ENST00000403461	TMPRSS6	Q8IU80	811 aa		7.05	□□□□□ -1.28
CEACAM1-208	ENST00000403461	AFAP1L2	Q8N4X5	818 aa		7.05	□□□□□ -1.28
CEACAM1-208	ENST00000403461	DTX3	Q8N9I9	347 aa		7.05	□□□□□ -1.28
CEACAM1-208	ENST00000403461	XXYLT1	Q8NBI6	393 aa		7.05	□□□□□ -1.28
CEACAM1-208	ENST00000403461	SCAMP5	Q8TAC9	235 aa		7.05	□□□□□ -1.28
CEACAM1-208	ENST00000403461	DNASE2B	Q8WZ79	361 aa		7.05	□□□□□ -1.28
CEACAM1-208	ENST00000403461	SNX19	Q92543	992 aa		7.05	□□□□□ -1.28
CEACAM1-208	ENST00000403461	USP7	Q93009	1102 aa		7.05	□□□□□ -1.28
CEACAM1-208	ENST00000403461	SKA1	Q96BD8	255 aa		7.05	□□□□□ -1.28
CEACAM1-208	ENST00000403461	DNAJC19	Q96DA6	116 aa		7.05	□□□□□ -1.28

Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms