RNA–Protein interactions for RNA: ENST00000400540.5

LINC00544-201, long intergenic non-protein coding RNA 544, humanhuman

TSL 5 BASIC

Gene LINC00544, Length 1,031 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00544-201ENST00000400540 RBMS1P29558 406 aaKnown RBP12.11□□□□□ -0.47
LINC00544-201ENST00000400540 SCNN1AP37088 669 aa12.11□□□□□ -0.47
LINC00544-201ENST00000400540 ADKP55263 362 aaKnown RBP12.11□□□□□ -0.47
LINC00544-201ENST00000400540 ATP11AP98196 1134 aa12.11□□□□□ -0.47
LINC00544-201ENST00000400540 SGCGQ13326 291 aa12.11□□□□□ -0.47
LINC00544-201ENST00000400540 TCEA2Q15560 299 aa12.11□□□□□ -0.47
LINC00544-201ENST00000400540 CAMK4Q16566 473 aa12.11□□□□□ -0.47
LINC00544-201ENST00000400540 C15orf59Q2T9L4 293 aaPredicted RBP12.11□□□□□ -0.47
LINC00544-201ENST00000400540 HSP90AA4PQ58FG1 418 aa12.11□□□□□ -0.47
LINC00544-201ENST00000400540 PRRT3Q5FWE3 981 aa12.11□□□□□ -0.47
LINC00544-201ENST00000400540 IGF2-ASQ6U949 168 aa12.11□□□□□ -0.47
LINC00544-201ENST00000400540 RBM44Q6ZP01 1051 aaKnown RBP12.11□□□□□ -0.47
LINC00544-201ENST00000400540 NYAP1Q6ZVC0 841 aa12.11□□□□□ -0.47
LINC00544-201ENST00000400540 NOP9Q86U38 636 aaKnown RBP12.11□□□□□ -0.47
LINC00544-201ENST00000400540 VPS36Q86VN1 386 aa12.11□□□□□ -0.47
LINC00544-201ENST00000400540 NETO2Q8NC67 525 aa12.11□□□□□ -0.47
LINC00544-201ENST00000400540 IL12RB2Q99665 862 aa12.11□□□□□ -0.47
LINC00544-201ENST00000400540 LRRC61Q9BV99 259 aa12.11□□□□□ -0.47
LINC00544-201ENST00000400540 SYNDIG1Q9H7V2 258 aa12.11□□□□□ -0.47
LINC00544-201ENST00000400540 METTL5Q9NRN9 209 aaKnown RBP12.11□□□□□ -0.47
LINC00544-201ENST00000400540 DNAI1Q9UI46 699 aa12.11□□□□□ -0.47
LINC00544-201ENST00000400540 SALL4Q9UJQ4 1053 aa12.11□□□□□ -0.47
LINC00544-201ENST00000400540 TMEM59LQ9UK28 342 aa12.11□□□□□ -0.47
LINC00544-201ENST00000400540 NEU3Q9UQ49 428 aa12.11□□□□□ -0.47
LINC00544-201ENST00000400540 SSUH2Q9Y2M2 353 aa12.11□□□□□ -0.47
LINC00544-201ENST00000400540 COL12A1Q99715 3063 aa12.1□□□□□ -0.47
LINC00544-201ENST00000400540 CDRT15L2A8MXV6 281 aa12.1□□□□□ -0.47
LINC00544-201ENST00000400540 FAM72CH0Y354 149 aa12.1□□□□□ -0.47
LINC00544-201ENST00000400540 KRIT1O00522 736 aa12.1□□□□□ -0.47
LINC00544-201ENST00000400540 NEMP1O14524 444 aa12.1□□□□□ -0.47
LINC00544-201ENST00000400540 TSPAN6O43657 245 aa12.1□□□□□ -0.47
LINC00544-201ENST00000400540 SLC20A2Q08357 652 aa12.1□□□□□ -0.47
LINC00544-201ENST00000400540 MAN2A1Q16706 1144 aa12.1□□□□□ -0.47
LINC00544-201ENST00000400540 CDO1Q16878 200 aa12.1□□□□□ -0.47
LINC00544-201ENST00000400540 ZNF805Q5CZA5 627 aa12.1□□□□□ -0.47
LINC00544-201ENST00000400540 MIIPQ5JXC2 388 aa12.1□□□□□ -0.47
LINC00544-201ENST00000400540 C6orf132Q5T0Z8 1188 aa12.1□□□□□ -0.47
LINC00544-201ENST00000400540 ATXN7L2Q5T6C5 722 aaPredicted RBP12.1□□□□□ -0.47
LINC00544-201ENST00000400540 FAM72AQ5TYM5 149 aa12.1□□□□□ -0.47
LINC00544-201ENST00000400540 MANEALQ5VSG8 457 aa12.1□□□□□ -0.47
LINC00544-201ENST00000400540 FAM72DQ6L9T8 149 aa12.1□□□□□ -0.47
LINC00544-201ENST00000400540 PHLDB2Q86SQ0 1253 aa12.1□□□□□ -0.47
LINC00544-201ENST00000400540 NLRP14Q86W24 1093 aa12.1□□□□□ -0.47
LINC00544-201ENST00000400540 FAM72BQ86X60 149 aa12.1□□□□□ -0.47
LINC00544-201ENST00000400540 PHACTR4Q8IZ21 702 aa12.1□□□□□ -0.47
LINC00544-201ENST00000400540 DENND6BQ8NEG7 585 aa12.1□□□□□ -0.47
LINC00544-201ENST00000400540 SNRNP27Q8WVK2 155 aaKnown RBP12.1□□□□□ -0.47
LINC00544-201ENST00000400540 CPA5Q8WXQ8 436 aa12.1□□□□□ -0.47
LINC00544-201ENST00000400540 ARHGEF2Q92974 986 aaKnown RBP12.1□□□□□ -0.47
LINC00544-201ENST00000400540 CENPTQ96BT3 561 aa12.1□□□□□ -0.47
LINC00544-201ENST00000400540 WBP1Q96G27 269 aa12.1□□□□□ -0.47
LINC00544-201ENST00000400540 KLHL32Q96NJ5 620 aa12.1□□□□□ -0.47
LINC00544-201ENST00000400540 CCDC3Q9BQI4 270 aa12.1□□□□□ -0.47
LINC00544-201ENST00000400540 CLPBQ9H078 707 aa12.1□□□□□ -0.47
LINC00544-201ENST00000400540 MBNL1Q9NR56 388 aaKnown RBP12.1□□□□□ -0.47
LINC00544-201ENST00000400540 KIAA1468Q9P260 1216 aa12.1□□□□□ -0.47
LINC00544-201ENST00000400540 PPARGC1AQ9UBK2 798 aaKnown RBP12.1□□□□□ -0.47
LINC00544-201ENST00000400540 SPASTQ9UBP0 616 aa12.1□□□□□ -0.47
LINC00544-201ENST00000400540 UBR5O95071 2799 aaPredicted RBP12.1□□□□□ -0.47
LINC00544-201ENST00000400540 MAST4O15021 2626 aa12.09□□□□□ -0.47
LINC00544-201ENST00000400540 SPENQ96T58 3664 aaKnown RBP12.09□□□□□ -0.47
LINC00544-201ENST00000400540 K7ENP7 123 aa12.09□□□□□ -0.47
LINC00544-201ENST00000400540 TPP1O14773 563 aa12.09□□□□□ -0.47
LINC00544-201ENST00000400540 AREL1O15033 823 aa12.09□□□□□ -0.47
LINC00544-201ENST00000400540 MMP20O60882 483 aa12.09□□□□□ -0.47
LINC00544-201ENST00000400540 TNFSF15O95150 251 aa12.09□□□□□ -0.47
LINC00544-201ENST00000400540 GJB6O95452 261 aa12.09□□□□□ -0.47
LINC00544-201ENST00000400540 GSRP00390 522 aa12.09□□□□□ -0.47
LINC00544-201ENST00000400540 MMEP08473 750 aa12.09□□□□□ -0.47
LINC00544-201ENST00000400540 TSHRP16473 764 aa12.09□□□□□ -0.47
LINC00544-201ENST00000400540 THOP1P52888 689 aa12.09□□□□□ -0.47
LINC00544-201ENST00000400540 NOMO3P69849 1222 aa12.09□□□□□ -0.47
LINC00544-201ENST00000400540 CLN3Q13286 438 aa12.09□□□□□ -0.47
LINC00544-201ENST00000400540 ACBD5Q5T8D3 534 aaPredicted RBP12.09□□□□□ -0.47
LINC00544-201ENST00000400540 NAA35Q5VZE5 725 aa12.09□□□□□ -0.47
LINC00544-201ENST00000400540 RWDD4Q6NW29 188 aaKnown RBP12.09□□□□□ -0.47
LINC00544-201ENST00000400540 INO80CQ6PI98 192 aaPredicted RBP12.09□□□□□ -0.47
LINC00544-201ENST00000400540 B3GNT8Q7Z7M8 397 aa12.09□□□□□ -0.47
LINC00544-201ENST00000400540 TP53I13Q8NBR0 393 aaPredicted RBP12.09□□□□□ -0.47
LINC00544-201ENST00000400540 OR2AP1Q8NGE2 309 aa12.09□□□□□ -0.47
LINC00544-201ENST00000400540 BTN2A2Q8WVV5 523 aa12.09□□□□□ -0.47
LINC00544-201ENST00000400540 RAB7BQ96AH8 199 aa12.09□□□□□ -0.47
LINC00544-201ENST00000400540 ISG20Q96AZ6 181 aaKnown RBP12.09□□□□□ -0.47
LINC00544-201ENST00000400540 NDST4Q9H3R1 872 aa12.09□□□□□ -0.47
LINC00544-201ENST00000400540 NCKIPSDQ9NZQ3 722 aa12.09□□□□□ -0.47
LINC00544-201ENST00000400540 OR12D3Q9UGF7 316 aa12.09□□□□□ -0.47
LINC00544-201ENST00000400540 RABGEF1Q9UJ41 708 aa12.09□□□□□ -0.47
LINC00544-201ENST00000400540 PCDHGA8Q9Y5G5 932 aa12.09□□□□□ -0.47
LINC00544-201ENST00000400540 B8ZZF3 427 aa12.08□□□□□ -0.48
LINC00544-201ENST00000400540 LMO7DNF2Z398 122 aa12.08□□□□□ -0.48
LINC00544-201ENST00000400540 YY2O15391 372 aa12.08□□□□□ -0.48
LINC00544-201ENST00000400540 TCEA3O75764 348 aa12.08□□□□□ -0.48
LINC00544-201ENST00000400540 C6P13671 934 aa12.08□□□□□ -0.48
LINC00544-201ENST00000400540 PRKCSHP14314 528 aaPredicted RBP12.08□□□□□ -0.48
LINC00544-201ENST00000400540 BPIFB4P59827 614 aa12.08□□□□□ -0.48
LINC00544-201ENST00000400540 SNRPD1P62314 119 aaKnown RBP12.08□□□□□ -0.48
LINC00544-201ENST00000400540 SRSF6Q13247 344 aaKnown RBP12.08□□□□□ -0.48
LINC00544-201ENST00000400540 SPIDRQ14159 915 aa12.08□□□□□ -0.48
LINC00544-201ENST00000400540 PTK2BQ14289 1009 aa12.08□□□□□ -0.48
LINC00544-201ENST00000400540 POLD3Q15054 466 aaPredicted RBP12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 110.2 ms