RNA–Protein interactions for RNA: ENST00000398738.2

PTCHD4-202, Transcript of patched domain containing 4, humanhuman

TSL 1 (best)

Gene PTCHD4, Length 3,232 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD4-202ENST00000398738 CTBP1Q13363 440 aa9.99□□□□□ -0.81
PTCHD4-202ENST00000398738 ADRM1Q16186 407 aa9.99□□□□□ -0.81
PTCHD4-202ENST00000398738 AARS2Q5JTZ9 985 aaKnown RBP9.99□□□□□ -0.81
PTCHD4-202ENST00000398738 COX20Q5RI15 118 aa9.99□□□□□ -0.81
PTCHD4-202ENST00000398738 PERM1Q5SV97 790 aa9.99□□□□□ -0.81
PTCHD4-202ENST00000398738 METTL21CQ5VZV1 264 aa9.99□□□□□ -0.81
PTCHD4-202ENST00000398738 Q6ZNX1 250 aa9.99□□□□□ -0.81
PTCHD4-202ENST00000398738 NT5DC4Q86YG4 428 aa9.99□□□□□ -0.81
PTCHD4-202ENST00000398738 EXT2Q93063 718 aa9.99□□□□□ -0.81
PTCHD4-202ENST00000398738 PHF21BQ96EK2 531 aa9.99□□□□□ -0.81
PTCHD4-202ENST00000398738 COX4I2Q96KJ9 171 aa9.99□□□□□ -0.81
PTCHD4-202ENST00000398738 RANBP9Q96S59 729 aa9.99□□□□□ -0.81
PTCHD4-202ENST00000398738 RBBP8Q99708 897 aa9.99□□□□□ -0.81
PTCHD4-202ENST00000398738 MTG1Q9BT17 334 aaPredicted RBP9.99□□□□□ -0.81
PTCHD4-202ENST00000398738 SLC2A11Q9BYW1 496 aa9.99□□□□□ -0.81
PTCHD4-202ENST00000398738 VPS33BQ9H267 617 aa9.99□□□□□ -0.81
PTCHD4-202ENST00000398738 ZBTB26Q9HCK0 441 aa9.99□□□□□ -0.81
PTCHD4-202ENST00000398738 XPR1Q9UBH6 696 aa9.99□□□□□ -0.81
PTCHD4-202ENST00000398738 FOCADQ5VW36 1801 aa9.99□□□□□ -0.81
PTCHD4-202ENST00000398738 KLRG2A4D1S0 409 aaPredicted RBP9.99□□□□□ -0.81
PTCHD4-202ENST00000398738 GPR25O00155 361 aa9.99□□□□□ -0.81
PTCHD4-202ENST00000398738 IL2RAP01589 272 aa9.99□□□□□ -0.81
PTCHD4-202ENST00000398738 FUCA1P04066 466 aa9.99□□□□□ -0.81
PTCHD4-202ENST00000398738 VDRP11473 427 aa9.99□□□□□ -0.81
PTCHD4-202ENST00000398738 ALOX15P16050 662 aaPredicted RBP9.99□□□□□ -0.81
PTCHD4-202ENST00000398738 PRDX6P30041 224 aa9.99□□□□□ -0.81
PTCHD4-202ENST00000398738 HALP42357 657 aa9.99□□□□□ -0.81
PTCHD4-202ENST00000398738 MAPK8P45983 427 aa9.99□□□□□ -0.81
PTCHD4-202ENST00000398738 CD97P48960 835 aa9.99□□□□□ -0.81
PTCHD4-202ENST00000398738 RABGGTBP53611 331 aa9.99□□□□□ -0.81
PTCHD4-202ENST00000398738 PRKCQQ04759 706 aa9.99□□□□□ -0.81
PTCHD4-202ENST00000398738 PMS2P3Q13401 168 aa9.99□□□□□ -0.81
PTCHD4-202ENST00000398738 GRTP1Q5TC63 336 aa9.99□□□□□ -0.81
PTCHD4-202ENST00000398738 EGFLAMQ63HQ2 1017 aa9.99□□□□□ -0.81
PTCHD4-202ENST00000398738 SPPL2CQ8IUH8 684 aa9.99□□□□□ -0.81
PTCHD4-202ENST00000398738 ZNF567Q8N184 647 aa9.99□□□□□ -0.81
PTCHD4-202ENST00000398738 CENPSQ8N2Z9 138 aa9.99□□□□□ -0.81
PTCHD4-202ENST00000398738 FSTL5Q8N475 847 aaPredicted RBP9.99□□□□□ -0.81
PTCHD4-202ENST00000398738 OR6B3Q8NGW1 331 aa9.99□□□□□ -0.81
PTCHD4-202ENST00000398738 RTP4Q96DX8 246 aa9.99□□□□□ -0.81
PTCHD4-202ENST00000398738 PLEKHA8Q96JA3 519 aa9.99□□□□□ -0.81
PTCHD4-202ENST00000398738 CPNE1Q99829 537 aa9.99□□□□□ -0.81
PTCHD4-202ENST00000398738 GPATCH1Q9BRR8 931 aaKnown RBP9.99□□□□□ -0.81
PTCHD4-202ENST00000398738 FBRSL1Q9HCM7 1045 aaKnown RBP9.99□□□□□ -0.81
PTCHD4-202ENST00000398738 CHST12Q9NRB3 414 aa9.99□□□□□ -0.81
PTCHD4-202ENST00000398738 SLC38A7Q9NVC3 462 aa9.99□□□□□ -0.81
PTCHD4-202ENST00000398738 OXSMQ9NWU1 459 aa9.99□□□□□ -0.81
PTCHD4-202ENST00000398738 BFARQ9NZS9 450 aa9.99□□□□□ -0.81
PTCHD4-202ENST00000398738 VANGL2Q9ULK5 521 aa9.99□□□□□ -0.81
PTCHD4-202ENST00000398738 CNOT6Q9ULM6 557 aaKnown RBP9.99□□□□□ -0.81
PTCHD4-202ENST00000398738 TRIM17Q9Y577 477 aa9.99□□□□□ -0.81
PTCHD4-202ENST00000398738 HEATR9A2RTY3 570 aa9.99□□□□□ -0.81
PTCHD4-202ENST00000398738 FUOMA2VDF0 154 aa9.99□□□□□ -0.81
PTCHD4-202ENST00000398738 GPR182O15218 404 aa9.99□□□□□ -0.81
PTCHD4-202ENST00000398738 STAG3L1P0CL83 205 aa9.99□□□□□ -0.81
PTCHD4-202ENST00000398738 NCAM1P13591 858 aa9.99□□□□□ -0.81
PTCHD4-202ENST00000398738 MAP4P27816 1152 aaKnown RBP9.99□□□□□ -0.81
PTCHD4-202ENST00000398738 CASP2P42575 452 aa9.99□□□□□ -0.81
PTCHD4-202ENST00000398738 NUMBP49757 651 aa9.99□□□□□ -0.81
PTCHD4-202ENST00000398738 CYP2A13Q16696 494 aa9.99□□□□□ -0.81
PTCHD4-202ENST00000398738 GEN1Q17RS7 908 aa9.99□□□□□ -0.81
PTCHD4-202ENST00000398738 LY6KQ17RY6 165 aa9.99□□□□□ -0.81
PTCHD4-202ENST00000398738 ZIK1Q3SY52 487 aaPredicted RBP9.99□□□□□ -0.81
PTCHD4-202ENST00000398738 NCBP2-AS2Q69YL0 99 aa9.99□□□□□ -0.81
PTCHD4-202ENST00000398738 HMBOX1Q6NT76 420 aa9.99□□□□□ -0.81
PTCHD4-202ENST00000398738 TTC30AQ86WT1 665 aa9.99□□□□□ -0.81
PTCHD4-202ENST00000398738 DLG3Q92796 817 aa9.99□□□□□ -0.81
PTCHD4-202ENST00000398738 NXNL1Q96CM4 212 aa9.99□□□□□ -0.81
PTCHD4-202ENST00000398738 SMOXQ9NWM0 555 aa9.99□□□□□ -0.81
PTCHD4-202ENST00000398738 HESX1Q9UBX0 185 aa9.99□□□□□ -0.81
PTCHD4-202ENST00000398738 GIMAP2Q9UG22 337 aa9.99□□□□□ -0.81
PTCHD4-202ENST00000398738 HCN4Q9Y3Q4 1203 aa9.99□□□□□ -0.81
PTCHD4-202ENST00000398738 TSC22D4Q9Y3Q8 395 aa9.99□□□□□ -0.81
PTCHD4-202ENST00000398738 CNTNAP1P78357 1384 aa9.99□□□□□ -0.81
PTCHD4-202ENST00000398738 C9IYK1 514 aa9.98□□□□□ -0.81
PTCHD4-202ENST00000398738 PIGRP01833 764 aa9.98□□□□□ -0.81
PTCHD4-202ENST00000398738 PORP16435 677 aaPredicted RBP9.98□□□□□ -0.81
PTCHD4-202ENST00000398738 HMOX2P30519 316 aa9.98□□□□□ -0.81
PTCHD4-202ENST00000398738 ALDH3B2P48448 385 aa9.98□□□□□ -0.81
PTCHD4-202ENST00000398738 LIMK2P53671 638 aa9.98□□□□□ -0.81
PTCHD4-202ENST00000398738 SLC6A3Q01959 620 aa9.98□□□□□ -0.81
PTCHD4-202ENST00000398738 FASTKQ14296 549 aaKnown RBP9.98□□□□□ -0.81
PTCHD4-202ENST00000398738 CAPRIN1Q14444 709 aaKnown RBP9.98□□□□□ -0.81
PTCHD4-202ENST00000398738 NR1D2Q14995 579 aa9.98□□□□□ -0.81
PTCHD4-202ENST00000398738 CARTPTQ16568 116 aa9.98□□□□□ -0.81
PTCHD4-202ENST00000398738 SOWAHAQ2M3V2 549 aa9.98□□□□□ -0.81
PTCHD4-202ENST00000398738 NANOGP8Q6NSW7 305 aa9.98□□□□□ -0.81
PTCHD4-202ENST00000398738 MPZL3Q6UWV2 235 aa9.98□□□□□ -0.81
PTCHD4-202ENST00000398738 ZPBP2Q6X784 338 aa9.98□□□□□ -0.81
PTCHD4-202ENST00000398738 GPR180Q86V85 440 aa9.98□□□□□ -0.81
PTCHD4-202ENST00000398738 KCNMB4Q86W47 210 aa9.98□□□□□ -0.81
PTCHD4-202ENST00000398738 CROCCP3Q8IVE0 287 aa9.98□□□□□ -0.81
PTCHD4-202ENST00000398738 BPIFB6Q8NFQ5 453 aa9.98□□□□□ -0.81
PTCHD4-202ENST00000398738 GFM2Q969S9 779 aaKnown RBP9.98□□□□□ -0.81
PTCHD4-202ENST00000398738 SLCO4A1Q96BD0 722 aa9.98□□□□□ -0.81
PTCHD4-202ENST00000398738 ZNF670Q9BS34 389 aa9.98□□□□□ -0.81
PTCHD4-202ENST00000398738 NT5C1AQ9BXI3 368 aa9.98□□□□□ -0.81
PTCHD4-202ENST00000398738 CDT1Q9H211 546 aa9.98□□□□□ -0.81
PTCHD4-202ENST00000398738 GREB1LQ9C091 1923 aaPredicted RBP9.98□□□□□ -0.81
PTCHD4-202ENST00000398738 A0A087WXM4 84 aa9.98□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms