RNA–Protein interactions for RNA: ENST00000396828.8

NEDD8-202, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 2

Gene NEDD8, Length 626 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-202ENST00000396828 MPP6Q9NZW5 540 aa10.55□□□□□ -0.72
NEDD8-202ENST00000396828 VPS51Q9UID3 782 aa10.55□□□□□ -0.72
NEDD8-202ENST00000396828 SLC25A13Q9UJS0 675 aa10.55□□□□□ -0.72
NEDD8-202ENST00000396828 PCDHGA1Q9Y5H4 931 aa10.55□□□□□ -0.72
NEDD8-202ENST00000396828 ACTL7AQ9Y615 435 aa10.55□□□□□ -0.72
NEDD8-202ENST00000396828 TENM4Q6N022 2769 aa10.54□□□□□ -0.72
NEDD8-202ENST00000396828 DOCK4Q8N1I0 1966 aa10.54□□□□□ -0.72
NEDD8-202ENST00000396828 A0A1W2PQU0 124 aa10.54□□□□□ -0.72
NEDD8-202ENST00000396828 SIGLEC16A6NMB1 481 aa10.54□□□□□ -0.72
NEDD8-202ENST00000396828 GOLGA8SH3BPF8 625 aa10.54□□□□□ -0.72
NEDD8-202ENST00000396828 MYO1FO00160 1098 aa10.54□□□□□ -0.72
NEDD8-202ENST00000396828 SLC31A1O15431 190 aa10.54□□□□□ -0.72
NEDD8-202ENST00000396828 RNGTTO60942 597 aaKnown RBP10.54□□□□□ -0.72
NEDD8-202ENST00000396828 CLDN11O75508 207 aa10.54□□□□□ -0.72
NEDD8-202ENST00000396828 PALMO75781 387 aa10.54□□□□□ -0.72
NEDD8-202ENST00000396828 ENDOD1O94919 500 aa10.54□□□□□ -0.72
NEDD8-202ENST00000396828 GIMD1P0DJR0 217 aa10.54□□□□□ -0.72
NEDD8-202ENST00000396828 KRT3P12035 628 aa10.54□□□□□ -0.72
NEDD8-202ENST00000396828 CASQ1P31415 396 aa10.54□□□□□ -0.72
NEDD8-202ENST00000396828 SCNN1AP37088 669 aa10.54□□□□□ -0.72
NEDD8-202ENST00000396828 ARRB1P49407 418 aaPredicted RBP10.54□□□□□ -0.72
NEDD8-202ENST00000396828 CXCR3P49682 368 aa10.54□□□□□ -0.72
NEDD8-202ENST00000396828 CDH4P55283 916 aa10.54□□□□□ -0.72
NEDD8-202ENST00000396828 CLDN2P57739 230 aa10.54□□□□□ -0.72
NEDD8-202ENST00000396828 SEMG2Q02383 582 aa10.54□□□□□ -0.72
NEDD8-202ENST00000396828 STAT4Q14765 748 aa10.54□□□□□ -0.72
NEDD8-202ENST00000396828 PROX2Q3B8N5 592 aa10.54□□□□□ -0.72
NEDD8-202ENST00000396828 SEL1L3Q68CR1 1132 aa10.54□□□□□ -0.72
NEDD8-202ENST00000396828 SYT10Q6XYQ8 523 aa10.54□□□□□ -0.72
NEDD8-202ENST00000396828 TFAP2DQ7Z6R9 452 aa10.54□□□□□ -0.72
NEDD8-202ENST00000396828 DAAM2Q86T65 1068 aa10.54□□□□□ -0.72
NEDD8-202ENST00000396828 TRIM69Q86WT6 500 aa10.54□□□□□ -0.72
NEDD8-202ENST00000396828 SLC22A18ASQ8N1D0 253 aa10.54□□□□□ -0.72
NEDD8-202ENST00000396828 TMEM145Q8NBT3 493 aa10.54□□□□□ -0.72
NEDD8-202ENST00000396828 OR7D4Q8NG98 312 aa10.54□□□□□ -0.72
NEDD8-202ENST00000396828 TPCN2Q8NHX9 752 aa10.54□□□□□ -0.72
NEDD8-202ENST00000396828 UBE2Q2Q8WVN8 375 aa10.54□□□□□ -0.72
NEDD8-202ENST00000396828 NT5C3BQ969T7 300 aa10.54□□□□□ -0.72
NEDD8-202ENST00000396828 MCEEQ96PE7 176 aa10.54□□□□□ -0.72
NEDD8-202ENST00000396828 MAGEB5Q9BZ81 275 aa10.54□□□□□ -0.72
NEDD8-202ENST00000396828 MUC3BQ9H195 1237 aa10.54□□□□□ -0.72
NEDD8-202ENST00000396828 TNKS2Q9H2K2 1166 aa10.54□□□□□ -0.72
NEDD8-202ENST00000396828 KDM4CQ9H3R0 1056 aa10.54□□□□□ -0.72
NEDD8-202ENST00000396828 ZNF212Q9UDV6 495 aa10.54□□□□□ -0.72
NEDD8-202ENST00000396828 IP6K2Q9UHH9 426 aa10.54□□□□□ -0.72
NEDD8-202ENST00000396828 DNAI1Q9UI46 699 aa10.54□□□□□ -0.72
NEDD8-202ENST00000396828 SALL4Q9UJQ4 1053 aa10.54□□□□□ -0.72
NEDD8-202ENST00000396828 ANAPC7Q9UJX3 599 aa10.54□□□□□ -0.72
NEDD8-202ENST00000396828 ZFR2Q9UPR6 939 aaKnown RBP10.54□□□□□ -0.72
NEDD8-202ENST00000396828 HS3ST2Q9Y278 367 aa10.54□□□□□ -0.72
NEDD8-202ENST00000396828 JRKLQ9Y4A0 524 aa10.54□□□□□ -0.72
NEDD8-202ENST00000396828 RAI2Q9Y5P3 530 aa10.54□□□□□ -0.72
NEDD8-202ENST00000396828 CTAGE9A4FU28 777 aa10.53□□□□□ -0.72
NEDD8-202ENST00000396828 DRGXA6NNA5 263 aa10.53□□□□□ -0.72
NEDD8-202ENST00000396828 KPNA3O00505 521 aaPredicted RBP10.53□□□□□ -0.72
NEDD8-202ENST00000396828 SLC7A4O43246 635 aa10.53□□□□□ -0.72
NEDD8-202ENST00000396828 SIGLEC6O43699 453 aa10.53□□□□□ -0.72
NEDD8-202ENST00000396828 THEGLP0DJG4 465 aa10.53□□□□□ -0.72
NEDD8-202ENST00000396828 CKMT2P17540 419 aa10.53□□□□□ -0.72
NEDD8-202ENST00000396828 CHRNA3P32297 505 aa10.53□□□□□ -0.72
NEDD8-202ENST00000396828 FLT3P36888 993 aa10.53□□□□□ -0.72
NEDD8-202ENST00000396828 SULT1E1P49888 294 aa10.53□□□□□ -0.72
NEDD8-202ENST00000396828 INSM1Q01101 510 aaPredicted RBP10.53□□□□□ -0.72
NEDD8-202ENST00000396828 ZNF284Q2VY69 593 aa10.53□□□□□ -0.72
NEDD8-202ENST00000396828 SLC45A4Q5BKX6 768 aa10.53□□□□□ -0.72
NEDD8-202ENST00000396828 ARSIQ5FYB1 569 aa10.53□□□□□ -0.72
NEDD8-202ENST00000396828 FAM46CQ5VWP2 391 aa10.53□□□□□ -0.72
NEDD8-202ENST00000396828 C11orf63Q6NUN7 778 aa10.53□□□□□ -0.72
NEDD8-202ENST00000396828 KDM7AQ6ZMT4 941 aa10.53□□□□□ -0.72
NEDD8-202ENST00000396828 PEX26Q7Z412 305 aa10.53□□□□□ -0.72
NEDD8-202ENST00000396828 DSG4Q86SJ6 1040 aa10.53□□□□□ -0.72
NEDD8-202ENST00000396828 SLC35F6Q8N357 371 aa10.53□□□□□ -0.72
NEDD8-202ENST00000396828 ATP11CQ8NB49 1132 aa10.53□□□□□ -0.72
NEDD8-202ENST00000396828 KIF18AQ8NI77 898 aa10.53□□□□□ -0.72
NEDD8-202ENST00000396828 ZNF592Q92610 1267 aa10.53□□□□□ -0.72
NEDD8-202ENST00000396828 VOPP1Q96AW1 172 aa10.53□□□□□ -0.72
NEDD8-202ENST00000396828 WDCPQ9H6R7 721 aa10.53□□□□□ -0.72
NEDD8-202ENST00000396828 METTL5Q9NRN9 209 aaKnown RBP10.53□□□□□ -0.72
NEDD8-202ENST00000396828 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP10.53□□□□□ -0.72
NEDD8-202ENST00000396828 DMTF1Q9Y222 760 aa10.53□□□□□ -0.72
NEDD8-202ENST00000396828 CAPN6Q9Y6Q1 641 aa10.53□□□□□ -0.72
NEDD8-202ENST00000396828 SHROOM3Q8TF72 1996 aa10.53□□□□□ -0.72
NEDD8-202ENST00000396828 PTPRQQ9UMZ3 2332 aa10.52□□□□□ -0.72
NEDD8-202ENST00000396828 IGLV3-10A0A075B6K4 115 aa10.52□□□□□ -0.73
NEDD8-202ENST00000396828 TCRBV5S1A1TA0A578 114 aa10.52□□□□□ -0.73
NEDD8-202ENST00000396828 GRID2IPA4D2P6 1211 aa10.52□□□□□ -0.73
NEDD8-202ENST00000396828 TMEM191CA6NGB0 347 aa10.52□□□□□ -0.73
NEDD8-202ENST00000396828 TMEM110-MUSTN1A8MSY1 372 aa10.52□□□□□ -0.73
NEDD8-202ENST00000396828 C1QTNF3-AMACRE9PGA6 284 aa10.52□□□□□ -0.73
NEDD8-202ENST00000396828 PRAMEF26H0Y7S4 382 aa10.52□□□□□ -0.73
NEDD8-202ENST00000396828 ALOX15BO15296 676 aa10.52□□□□□ -0.73
NEDD8-202ENST00000396828 YKT6O15498 198 aa10.52□□□□□ -0.73
NEDD8-202ENST00000396828 BUB1BO60566 1050 aaPredicted RBP10.52□□□□□ -0.73
NEDD8-202ENST00000396828 SRGAP2O75044 1071 aa10.52□□□□□ -0.73
NEDD8-202ENST00000396828 ZMPSTE24O75844 475 aa10.52□□□□□ -0.73
NEDD8-202ENST00000396828 CD160O95971 181 aa10.52□□□□□ -0.73
NEDD8-202ENST00000396828 PRB1P04280 392 aa10.52□□□□□ -0.73
NEDD8-202ENST00000396828 RHOCP08134 193 aa10.52□□□□□ -0.73
NEDD8-202ENST00000396828 C1SP09871 688 aa10.52□□□□□ -0.73
NEDD8-202ENST00000396828 DGKAP23743 735 aa10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms