RNA–Protein interactions for RNA: ENST00000392129.10

TMCO1-202, Transcript of transmembrane and coiled-coil domains 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMCO1, Length 1,946 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMCO1-202ENST00000392129 CKAP2Q8WWK9 683 aa12.4□□□□□ -0.42
TMCO1-202ENST00000392129 USP13Q92995 863 aaPredicted RBP12.4□□□□□ -0.42
TMCO1-202ENST00000392129 ZNF707Q96C28 371 aaPredicted RBP12.4□□□□□ -0.42
TMCO1-202ENST00000392129 ZNF317Q96PQ6 595 aaPredicted RBP12.4□□□□□ -0.42
TMCO1-202ENST00000392129 NOD2Q9HC29 1040 aa12.4□□□□□ -0.42
TMCO1-202ENST00000392129 PLK2Q9NYY3 685 aa12.4□□□□□ -0.42
TMCO1-202ENST00000392129 PRKAG3Q9UGI9 489 aa12.4□□□□□ -0.42
TMCO1-202ENST00000392129 PRDM4Q9UKN5 801 aa12.4□□□□□ -0.42
TMCO1-202ENST00000392129 CHD9Q3L8U1 2897 aa12.4□□□□□ -0.42
TMCO1-202ENST00000392129 CEP290O15078 2479 aa12.4□□□□□ -0.43
TMCO1-202ENST00000392129 CCDC78A2IDD5 438 aa12.39□□□□□ -0.43
TMCO1-202ENST00000392129 ZNF197O14709 1029 aa12.39□□□□□ -0.43
TMCO1-202ENST00000392129 ASMTLO95671 621 aa12.39□□□□□ -0.43
TMCO1-202ENST00000392129 FAM107AO95990 144 aa12.39□□□□□ -0.43
TMCO1-202ENST00000392129 ATXN1LP0C7T5 689 aaKnown RBP12.39□□□□□ -0.43
TMCO1-202ENST00000392129 PYGBP11216 843 aa12.39□□□□□ -0.43
TMCO1-202ENST00000392129 CES1P23141 567 aa12.39□□□□□ -0.43
TMCO1-202ENST00000392129 GP5P40197 560 aa12.39□□□□□ -0.43
TMCO1-202ENST00000392129 RGRP47804 291 aa12.39□□□□□ -0.43
TMCO1-202ENST00000392129 SCNN1BP51168 640 aa12.39□□□□□ -0.43
TMCO1-202ENST00000392129 DNAJC3Q13217 504 aa12.39□□□□□ -0.43
TMCO1-202ENST00000392129 SLC14A2Q15849 920 aa12.39□□□□□ -0.43
TMCO1-202ENST00000392129 INO80DQ53TQ3 878 aaPredicted RBP12.39□□□□□ -0.43
TMCO1-202ENST00000392129 HSP90AA5PQ58FG0 334 aa12.39□□□□□ -0.43
TMCO1-202ENST00000392129 SIRPB2Q5JXA9 342 aa12.39□□□□□ -0.43
TMCO1-202ENST00000392129 GRTP1Q5TC63 336 aa12.39□□□□□ -0.43
TMCO1-202ENST00000392129 RNF43Q68DV7 783 aa12.39□□□□□ -0.43
TMCO1-202ENST00000392129 ESRP1Q6NXG1 681 aaKnown RBP12.39□□□□□ -0.43
TMCO1-202ENST00000392129 LINGO4Q6UY18 593 aa12.39□□□□□ -0.43
TMCO1-202ENST00000392129 TAX1BP1Q86VP1 789 aa12.39□□□□□ -0.43
TMCO1-202ENST00000392129 CNPY4Q8N129 248 aa12.39□□□□□ -0.43
TMCO1-202ENST00000392129 RIN3Q8TB24 985 aa12.39□□□□□ -0.43
TMCO1-202ENST00000392129 GDAP1Q8TB36 358 aa12.39□□□□□ -0.43
TMCO1-202ENST00000392129 CHMP6Q96FZ7 201 aa12.39□□□□□ -0.43
TMCO1-202ENST00000392129 FEM1CQ96JP0 617 aa12.39□□□□□ -0.43
TMCO1-202ENST00000392129 RANBP9Q96S59 729 aa12.39□□□□□ -0.43
TMCO1-202ENST00000392129 AGAP2Q99490 1192 aa12.39□□□□□ -0.43
TMCO1-202ENST00000392129 CPNE1Q99829 537 aa12.39□□□□□ -0.43
TMCO1-202ENST00000392129 TREX1Q9NSU2 369 aa12.39□□□□□ -0.43
TMCO1-202ENST00000392129 TXNDC16Q9P2K2 825 aa12.39□□□□□ -0.43
TMCO1-202ENST00000392129 CLEC4EQ9ULY5 219 aa12.39□□□□□ -0.43
TMCO1-202ENST00000392129 HEATR9A2RTY3 570 aa12.39□□□□□ -0.43
TMCO1-202ENST00000392129 NDUFAB1O14561 156 aa12.39□□□□□ -0.43
TMCO1-202ENST00000392129 INSIG1O15503 277 aa12.39□□□□□ -0.43
TMCO1-202ENST00000392129 TMCC1O94876 653 aa12.39□□□□□ -0.43
TMCO1-202ENST00000392129 ZWINTO95229 277 aa12.39□□□□□ -0.43
TMCO1-202ENST00000392129 HLA-DPA1P20036 260 aa12.39□□□□□ -0.43
TMCO1-202ENST00000392129 ARCN1P48444 511 aaKnown RBP12.39□□□□□ -0.43
TMCO1-202ENST00000392129 IL9RQ01113 521 aa12.39□□□□□ -0.43
TMCO1-202ENST00000392129 PDPK2PQ6A1A2 396 aa12.39□□□□□ -0.43
TMCO1-202ENST00000392129 ELMSAN1Q6PJG2 1045 aa12.39□□□□□ -0.43
TMCO1-202ENST00000392129 APCDD1Q8J025 514 aa12.39□□□□□ -0.43
TMCO1-202ENST00000392129 DCAF4L2Q8NA75 395 aa12.39□□□□□ -0.43
TMCO1-202ENST00000392129 FIBINQ8TAL6 211 aa12.39□□□□□ -0.43
TMCO1-202ENST00000392129 TCP10LQ8TDR4 215 aa12.39□□□□□ -0.43
TMCO1-202ENST00000392129 IFT43Q96FT9 208 aa12.39□□□□□ -0.43
TMCO1-202ENST00000392129 NSMCE3Q96MG7 304 aa12.39□□□□□ -0.43
TMCO1-202ENST00000392129 NOTCH4Q99466 2003 aa12.39□□□□□ -0.43
TMCO1-202ENST00000392129 PBX4Q9BYU1 374 aa12.39□□□□□ -0.43
TMCO1-202ENST00000392129 KIAA1522Q9P206 1035 aaPredicted RBP12.39□□□□□ -0.43
TMCO1-202ENST00000392129 VPS51Q9UID3 782 aa12.39□□□□□ -0.43
TMCO1-202ENST00000392129 ERICH4A6NGS2 130 aa12.38□□□□□ -0.43
TMCO1-202ENST00000392129 TM9SF1O15321 606 aa12.38□□□□□ -0.43
TMCO1-202ENST00000392129 PRAMEF12O95522 483 aa12.38□□□□□ -0.43
TMCO1-202ENST00000392129 CYBBP04839 570 aa12.38□□□□□ -0.43
TMCO1-202ENST00000392129 ITGA2BP08514 1039 aa12.38□□□□□ -0.43
TMCO1-202ENST00000392129 DMTNQ08495 405 aa12.38□□□□□ -0.43
TMCO1-202ENST00000392129 SEPT6Q14141 434 aa12.38□□□□□ -0.43
TMCO1-202ENST00000392129 CNGA3Q16281 694 aa12.38□□□□□ -0.43
TMCO1-202ENST00000392129 STRA8Q7Z7C7 330 aa12.38□□□□□ -0.43
TMCO1-202ENST00000392129 APOPT1Q96IL0 206 aa12.38□□□□□ -0.43
TMCO1-202ENST00000392129 EXOC2Q96KP1 924 aa12.38□□□□□ -0.43
TMCO1-202ENST00000392129 ZSWIM3Q96MP5 696 aa12.38□□□□□ -0.43
TMCO1-202ENST00000392129 NUDCD1Q96RS6 583 aa12.38□□□□□ -0.43
TMCO1-202ENST00000392129 PAIP2Q9BPZ3 127 aaKnown RBP12.38□□□□□ -0.43
TMCO1-202ENST00000392129 C2orf49Q9BVC5 232 aaPredicted RBP12.38□□□□□ -0.43
TMCO1-202ENST00000392129 FAM107BQ9H098 131 aa12.38□□□□□ -0.43
TMCO1-202ENST00000392129 TLE6Q9H808 572 aa12.38□□□□□ -0.43
TMCO1-202ENST00000392129 SCUBE2Q9NQ36 999 aa12.38□□□□□ -0.43
TMCO1-202ENST00000392129 IARS2Q9NSE4 1012 aaKnown RBP12.38□□□□□ -0.43
TMCO1-202ENST00000392129 SLC2A6Q9UGQ3 507 aa12.38□□□□□ -0.43
TMCO1-202ENST00000392129 ZMYM5Q9UJ78 669 aa12.38□□□□□ -0.43
TMCO1-202ENST00000392129 HSFX4A0A1B0GTS1 333 aaPredicted RBP12.37□□□□□ -0.43
TMCO1-202ENST00000392129 HSFX3A0A1B0GWH4 333 aaPredicted RBP12.37□□□□□ -0.43
TMCO1-202ENST00000392129 GOLGA8TH3BQL2 631 aa12.37□□□□□ -0.43
TMCO1-202ENST00000392129 VAPBO95292 243 aa12.37□□□□□ -0.43
TMCO1-202ENST00000392129 PAPSS2O95340 614 aaPredicted RBP12.37□□□□□ -0.43
TMCO1-202ENST00000392129 FGF1P05230 155 aa12.37□□□□□ -0.43
TMCO1-202ENST00000392129 PAMP19021 973 aa12.37□□□□□ -0.43
TMCO1-202ENST00000392129 ARNTP27540 789 aa12.37□□□□□ -0.43
TMCO1-202ENST00000392129 SPRP35270 261 aaPredicted RBP12.37□□□□□ -0.43
TMCO1-202ENST00000392129 CCNFP41002 786 aa12.37□□□□□ -0.43
TMCO1-202ENST00000392129 NEK3P51956 506 aa12.37□□□□□ -0.43
TMCO1-202ENST00000392129 NSUN2Q08J23 767 aaKnown RBP eCLIP12.37□□□□□ -0.43
TMCO1-202ENST00000392129 LMAN2Q12907 356 aa12.37□□□□□ -0.43
TMCO1-202ENST00000392129 CBX2Q14781 532 aaPredicted RBP12.37□□□□□ -0.43
TMCO1-202ENST00000392129 ZSCAN26Q16670 478 aa12.37□□□□□ -0.43
TMCO1-202ENST00000392129 DUSP6Q16828 381 aa12.37□□□□□ -0.43
TMCO1-202ENST00000392129 TSTD2Q5T7W7 516 aa12.37□□□□□ -0.43
TMCO1-202ENST00000392129 KIAA0930Q6ICG6 404 aaPredicted RBP12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms