RNA–Protein interactions for RNA: ENST00000389386.7

VPS9D1-201, Transcript of VPS9 domain containing 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene VPS9D1, Length 2,748 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-201ENST00000389386 TUBA3CQ13748 450 aa14.81□□□□□ -0.04
VPS9D1-201ENST00000389386 ARL13AQ5H913 290 aaPredicted RBP14.81□□□□□ -0.04
VPS9D1-201ENST00000389386 CASC4Q6P4E1 433 aa14.81□□□□□ -0.04
VPS9D1-201ENST00000389386 CYP4V2Q6ZWL3 525 aaPredicted RBP14.81□□□□□ -0.04
VPS9D1-201ENST00000389386 SNX29P2Q8IUI4 249 aa14.81□□□□□ -0.04
VPS9D1-201ENST00000389386 OR5B17Q8NGF7 314 aa14.81□□□□□ -0.04
VPS9D1-201ENST00000389386 PNPT1Q8TCS8 783 aaKnown RBP14.81□□□□□ -0.04
VPS9D1-201ENST00000389386 WDR12Q9GZL7 423 aaKnown RBP14.81□□□□□ -0.04
VPS9D1-201ENST00000389386 HOXD1Q9GZZ0 328 aa14.81□□□□□ -0.04
VPS9D1-201ENST00000389386 OXSMQ9NWU1 459 aa14.81□□□□□ -0.04
VPS9D1-201ENST00000389386 CARD8Q9Y2G2 431 aa14.81□□□□□ -0.04
VPS9D1-201ENST00000389386 TMA7Q9Y2S6 64 aaKnown RBP14.81□□□□□ -0.04
VPS9D1-201ENST00000389386 RLFQ13129 1914 aa14.81□□□□□ -0.04
VPS9D1-201ENST00000389386 GUCY1B2O75343 617 aa14.81□□□□□ -0.04
VPS9D1-201ENST00000389386 ATG7O95352 703 aa14.81□□□□□ -0.04
VPS9D1-201ENST00000389386 PIGNO95427 931 aa14.81□□□□□ -0.04
VPS9D1-201ENST00000389386 KRT75O95678 551 aa14.81□□□□□ -0.04
VPS9D1-201ENST00000389386 TFE3P19532 575 aaPredicted RBP14.81□□□□□ -0.04
VPS9D1-201ENST00000389386 EEF1DP29692 281 aaKnown RBP14.81□□□□□ -0.04
VPS9D1-201ENST00000389386 ACTR2P61160 394 aa14.81□□□□□ -0.04
VPS9D1-201ENST00000389386 OCA2Q04671 838 aa14.81□□□□□ -0.04
VPS9D1-201ENST00000389386 GLRA4Q5JXX5 417 aa14.81□□□□□ -0.04
VPS9D1-201ENST00000389386 ZNF773Q6PK81 442 aa14.81□□□□□ -0.04
VPS9D1-201ENST00000389386 DHFR2Q86XF0 187 aa14.81□□□□□ -0.04
VPS9D1-201ENST00000389386 ANKRD13AQ8IZ07 590 aa14.81□□□□□ -0.04
VPS9D1-201ENST00000389386 TTC30BQ8N4P2 665 aa14.81□□□□□ -0.04
VPS9D1-201ENST00000389386 TMEM143Q96AN5 459 aa14.81□□□□□ -0.04
VPS9D1-201ENST00000389386 MRPL46Q9H2W6 279 aaKnown RBP14.81□□□□□ -0.04
VPS9D1-201ENST00000389386 RMND5AQ9H871 391 aa14.81□□□□□ -0.04
VPS9D1-201ENST00000389386 JPH1Q9HDC5 661 aaPredicted RBP14.81□□□□□ -0.04
VPS9D1-201ENST00000389386 CCM2LQ9NUG4 571 aaPredicted RBP14.81□□□□□ -0.04
VPS9D1-201ENST00000389386 IFT80Q9P2H3 777 aaPredicted RBP14.81□□□□□ -0.04
VPS9D1-201ENST00000389386 VTI1BQ9UEU0 232 aa14.81□□□□□ -0.04
VPS9D1-201ENST00000389386 PARP14Q460N5 1801 aa14.8□□□□□ -0.04
VPS9D1-201ENST00000389386 DOCK1Q14185 1865 aa14.8□□□□□ -0.04
VPS9D1-201ENST00000389386 A6NL46 340 aa14.8□□□□□ -0.04
VPS9D1-201ENST00000389386 FARP2O94887 1054 aaPredicted RBP14.8□□□□□ -0.04
VPS9D1-201ENST00000389386 MYCLP1P12525 358 aaPredicted RBP14.8□□□□□ -0.04
VPS9D1-201ENST00000389386 POLR2EP19388 210 aaKnown RBP14.8□□□□□ -0.04
VPS9D1-201ENST00000389386 IL4RP24394 825 aa14.8□□□□□ -0.04
VPS9D1-201ENST00000389386 LEPRP48357 1165 aaKnown RBP14.8□□□□□ -0.04
VPS9D1-201ENST00000389386 MPP1Q00013 466 aa14.8□□□□□ -0.04
VPS9D1-201ENST00000389386 PRKCEQ02156 737 aa14.8□□□□□ -0.04
VPS9D1-201ENST00000389386 SMAD1Q15797 465 aaKnown RBP14.8□□□□□ -0.04
VPS9D1-201ENST00000389386 KIZQ2M2Z5 673 aa14.8□□□□□ -0.04
VPS9D1-201ENST00000389386 C4orf22Q6V702 233 aa14.8□□□□□ -0.04
VPS9D1-201ENST00000389386 CATSPERGQ6ZRH7 1159 aa14.8□□□□□ -0.04
VPS9D1-201ENST00000389386 USP50Q70EL3 339 aaPredicted RBP14.8□□□□□ -0.04
VPS9D1-201ENST00000389386 ELMOD1Q8N336 334 aa14.8□□□□□ -0.04
VPS9D1-201ENST00000389386 DCLK2Q8N568 766 aa14.8□□□□□ -0.04
VPS9D1-201ENST00000389386 PDZD8Q8NEN9 1154 aa14.8□□□□□ -0.04
VPS9D1-201ENST00000389386 OR2T34Q8NGX1 318 aa14.8□□□□□ -0.04
VPS9D1-201ENST00000389386 OR2T3Q8NH03 318 aa14.8□□□□□ -0.04
VPS9D1-201ENST00000389386 CALML6Q8TD86 181 aa14.8□□□□□ -0.04
VPS9D1-201ENST00000389386 CAPSLQ8WWF8 208 aa14.8□□□□□ -0.04
VPS9D1-201ENST00000389386 ISL2Q96A47 359 aa14.8□□□□□ -0.04
VPS9D1-201ENST00000389386 TEX13BQ9BXU2 312 aa14.8□□□□□ -0.04
VPS9D1-201ENST00000389386 CACNA2D2Q9NY47 1150 aa14.8□□□□□ -0.04
VPS9D1-201ENST00000389386 PPP2R3BQ9Y5P8 575 aa14.8□□□□□ -0.04
VPS9D1-201ENST00000389386 RNF103-CHMP3A0A140T963 221 aa14.8□□□□□ -0.04
VPS9D1-201ENST00000389386 HMGCRP04035 888 aa14.8□□□□□ -0.04
VPS9D1-201ENST00000389386 SFNP31947 248 aa14.8□□□□□ -0.04
VPS9D1-201ENST00000389386 CAPGP40121 348 aa14.8□□□□□ -0.04
VPS9D1-201ENST00000389386 BCAR1P56945 870 aa14.8□□□□□ -0.04
VPS9D1-201ENST00000389386 SPCS2Q15005 226 aa14.8□□□□□ -0.04
VPS9D1-201ENST00000389386 MAPRE1Q15691 268 aaKnown RBP14.8□□□□□ -0.04
VPS9D1-201ENST00000389386 ATP6AP1Q15904 470 aa14.8□□□□□ -0.04
VPS9D1-201ENST00000389386 CCNYL2Q5T2Q4 361 aa14.8□□□□□ -0.04
VPS9D1-201ENST00000389386 IQSEC1Q6DN90 963 aa14.8□□□□□ -0.04
VPS9D1-201ENST00000389386 PIWIL3Q7Z3Z3 882 aaKnown RBP14.8□□□□□ -0.04
VPS9D1-201ENST00000389386 OR7G1Q8NGA0 311 aa14.8□□□□□ -0.04
VPS9D1-201ENST00000389386 TRIB2Q92519 343 aa14.8□□□□□ -0.04
VPS9D1-201ENST00000389386 BHMTQ93088 406 aa14.8□□□□□ -0.04
VPS9D1-201ENST00000389386 TP63Q9H3D4 680 aaPredicted RBP14.8□□□□□ -0.04
VPS9D1-201ENST00000389386 ATP13A3Q9H7F0 1226 aa14.8□□□□□ -0.04
VPS9D1-201ENST00000389386 RRAGCQ9HB90 399 aa14.8□□□□□ -0.04
VPS9D1-201ENST00000389386 SPAG4Q9NPE6 437 aa14.8□□□□□ -0.04
VPS9D1-201ENST00000389386 ANKEF1Q9NU02 776 aa14.8□□□□□ -0.04
VPS9D1-201ENST00000389386 PKD2L2Q9NZM6 624 aa14.8□□□□□ -0.04
VPS9D1-201ENST00000389386 AGO2Q9UKV8 859 aaKnown RBP14.8□□□□□ -0.04
VPS9D1-201ENST00000389386 HES2Q9Y543 173 aa14.8□□□□□ -0.04
VPS9D1-201ENST00000389386 RAD54BQ9Y620 910 aa14.8□□□□□ -0.04
VPS9D1-201ENST00000389386 FAM149AA5PLN7 773 aa14.79□□□□□ -0.04
VPS9D1-201ENST00000389386 C7P10643 843 aa14.79□□□□□ -0.04
VPS9D1-201ENST00000389386 BMPR1AP36894 532 aa14.79□□□□□ -0.04
VPS9D1-201ENST00000389386 GP5P40197 560 aa14.79□□□□□ -0.04
VPS9D1-201ENST00000389386 YWHAEP62258 255 aaKnown RBP14.79□□□□□ -0.04
VPS9D1-201ENST00000389386 PRKAA1Q13131 559 aa14.79□□□□□ -0.04
VPS9D1-201ENST00000389386 Q3C1V9 767 aa14.79□□□□□ -0.04
VPS9D1-201ENST00000389386 SH3PXD2AQ5TCZ1 1133 aa14.79□□□□□ -0.04
VPS9D1-201ENST00000389386 XAF1Q6GPH4 301 aa14.79□□□□□ -0.04
VPS9D1-201ENST00000389386 LRRC8EQ6NSJ5 796 aa14.79□□□□□ -0.04
VPS9D1-201ENST00000389386 PLEKHG7Q6ZR37 379 aa14.79□□□□□ -0.04
VPS9D1-201ENST00000389386 CLEC14AQ86T13 490 aa14.79□□□□□ -0.04
VPS9D1-201ENST00000389386 XYLT1Q86Y38 959 aa14.79□□□□□ -0.04
VPS9D1-201ENST00000389386 PARP8Q8N3A8 854 aa14.79□□□□□ -0.04
VPS9D1-201ENST00000389386 DHRSXQ8N5I4 330 aa14.79□□□□□ -0.04
VPS9D1-201ENST00000389386 SNX31Q8N9S9 440 aa14.79□□□□□ -0.04
VPS9D1-201ENST00000389386 PHIPQ8WWQ0 1821 aa14.79□□□□□ -0.04
VPS9D1-201ENST00000389386 FAR2Q96K12 515 aa14.79□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms