RNA–Protein interactions for RNA: ENST00000378133.4

PCDHA1-201, Transcript of protocadherin alpha 1, humanhuman

BASIC

Gene PCDHA1, Length 2,726 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA1-201ENST00000378133 SHROOM3Q8TF72 1996 aa16.8■□□□□ 0.28
PCDHA1-201ENST00000378133 H0YJX3 145 aa16.8■□□□□ 0.28
PCDHA1-201ENST00000378133 PNPLA4P41247 253 aa16.8■□□□□ 0.28
PCDHA1-201ENST00000378133 GJA8P48165 433 aa16.8■□□□□ 0.28
PCDHA1-201ENST00000378133 RPL14P50914 215 aaKnown RBP16.8■□□□□ 0.28
PCDHA1-201ENST00000378133 TPI1P60174 286 aa16.8■□□□□ 0.28
PCDHA1-201ENST00000378133 IKBKEQ14164 716 aa16.8■□□□□ 0.28
PCDHA1-201ENST00000378133 KCTD11Q693B1 232 aa16.8■□□□□ 0.28
PCDHA1-201ENST00000378133 ITPRIPL1Q6GPH6 555 aa16.8■□□□□ 0.28
PCDHA1-201ENST00000378133 CTU1Q7Z7A3 348 aaKnown RBP16.8■□□□□ 0.28
PCDHA1-201ENST00000378133 CARM1Q86X55 608 aa16.8■□□□□ 0.28
PCDHA1-201ENST00000378133 MYO1HQ8N1T3 1032 aa16.8■□□□□ 0.28
PCDHA1-201ENST00000378133 CPSF7Q8N684 471 aaKnown RBP16.8■□□□□ 0.28
PCDHA1-201ENST00000378133 GIPC3Q8TF64 312 aa16.8■□□□□ 0.28
PCDHA1-201ENST00000378133 OLAHQ9NV23 265 aa16.8■□□□□ 0.28
PCDHA1-201ENST00000378133 ADA2Q9NZK5 511 aa16.8■□□□□ 0.28
PCDHA1-201ENST00000378133 ZNHIT2Q9UHR6 403 aa16.8■□□□□ 0.28
PCDHA1-201ENST00000378133 YJEFN3A6XGL0 299 aa16.79■□□□□ 0.28
PCDHA1-201ENST00000378133 CYP2B6P20813 491 aa16.79■□□□□ 0.28
PCDHA1-201ENST00000378133 CCNA1P78396 465 aa16.79■□□□□ 0.28
PCDHA1-201ENST00000378133 ZBTB17Q13105 803 aa16.79■□□□□ 0.28
PCDHA1-201ENST00000378133 SV2CQ496J9 727 aa16.79■□□□□ 0.28
PCDHA1-201ENST00000378133 WSCD1Q658N2 575 aa16.79■□□□□ 0.28
PCDHA1-201ENST00000378133 PDZD4Q76G19 769 aaPredicted RBP16.79■□□□□ 0.28
PCDHA1-201ENST00000378133 VPS39Q96JC1 886 aa16.79■□□□□ 0.28
PCDHA1-201ENST00000378133 MARK4Q96L34 752 aa16.79■□□□□ 0.28
PCDHA1-201ENST00000378133 SLC2A13Q96QE2 648 aa16.79■□□□□ 0.28
PCDHA1-201ENST00000378133 RANBP9Q96S59 729 aa16.79■□□□□ 0.28
PCDHA1-201ENST00000378133 NPAS2Q99743 824 aa16.79■□□□□ 0.28
PCDHA1-201ENST00000378133 ULBP1Q9BZM6 244 aa16.79■□□□□ 0.28
PCDHA1-201ENST00000378133 TRPV6Q9H1D0 765 aa16.79■□□□□ 0.28
PCDHA1-201ENST00000378133 PNPLA3Q9NST1 481 aa16.79■□□□□ 0.28
PCDHA1-201ENST00000378133 SPATA7Q9P0W8 599 aa16.79■□□□□ 0.28
PCDHA1-201ENST00000378133 RAP2CQ9Y3L5 183 aa16.79■□□□□ 0.28
PCDHA1-201ENST00000378133 SNX10Q9Y5X0 201 aa16.79■□□□□ 0.28
PCDHA1-201ENST00000378133 TK2O00142 265 aa16.79■□□□□ 0.28
PCDHA1-201ENST00000378133 SLC22A2O15244 555 aa16.79■□□□□ 0.28
PCDHA1-201ENST00000378133 FGFR3P22607 806 aa16.79■□□□□ 0.28
PCDHA1-201ENST00000378133 NMBRP28336 390 aa16.79■□□□□ 0.28
PCDHA1-201ENST00000378133 GJA5P36382 358 aa16.79■□□□□ 0.28
PCDHA1-201ENST00000378133 LIMS2Q7Z4I7 341 aa16.79■□□□□ 0.28
PCDHA1-201ENST00000378133 PTAR1Q7Z6K3 402 aaPredicted RBP16.79■□□□□ 0.28
PCDHA1-201ENST00000378133 TRPC4APQ8TEL6 797 aa16.79■□□□□ 0.28
PCDHA1-201ENST00000378133 LRTOMTQ8WZ04 291 aa16.79■□□□□ 0.28
PCDHA1-201ENST00000378133 DNAI2Q9GZS0 605 aa16.79■□□□□ 0.28
PCDHA1-201ENST00000378133 TASP1Q9H6P5 420 aa16.79■□□□□ 0.28
PCDHA1-201ENST00000378133 WDR6Q9NNW5 1121 aaKnown RBP16.79■□□□□ 0.28
PCDHA1-201ENST00000378133 OXSMQ9NWU1 459 aa16.79■□□□□ 0.28
PCDHA1-201ENST00000378133 TADA2AO75478 443 aa16.78■□□□□ 0.28
PCDHA1-201ENST00000378133 VAPBO95292 243 aa16.78■□□□□ 0.28
PCDHA1-201ENST00000378133 CYP2C9P11712 490 aa16.78■□□□□ 0.28
PCDHA1-201ENST00000378133 TFEBP19484 476 aa16.78■□□□□ 0.28
PCDHA1-201ENST00000378133 NFKB1P19838 968 aa16.78■□□□□ 0.28
PCDHA1-201ENST00000378133 CDH15P55291 814 aa16.78■□□□□ 0.28
PCDHA1-201ENST00000378133 NAA20P61599 178 aa16.78■□□□□ 0.28
PCDHA1-201ENST00000378133 TUBA4AP68366 448 aa16.78■□□□□ 0.28
PCDHA1-201ENST00000378133 PTK2BQ14289 1009 aa16.78■□□□□ 0.28
PCDHA1-201ENST00000378133 GRM3Q14832 879 aa16.78■□□□□ 0.28
PCDHA1-201ENST00000378133 DUSP28Q4G0W2 176 aa16.78■□□□□ 0.28
PCDHA1-201ENST00000378133 KIAA0319Q5VV43 1072 aa16.78■□□□□ 0.28
PCDHA1-201ENST00000378133 ARRDC4Q8NCT1 418 aa16.78■□□□□ 0.28
PCDHA1-201ENST00000378133 DNAJB3Q8WWF6 145 aa16.78■□□□□ 0.28
PCDHA1-201ENST00000378133 APBA2Q99767 749 aa16.78■□□□□ 0.28
PCDHA1-201ENST00000378133 ACE2Q9BYF1 805 aaPredicted RBP16.78■□□□□ 0.28
PCDHA1-201ENST00000378133 CACNG4Q9UBN1 327 aa16.78■□□□□ 0.28
PCDHA1-201ENST00000378133 TRIM38O00635 465 aa16.78■□□□□ 0.28
PCDHA1-201ENST00000378133 TIMM44O43615 452 aa16.78■□□□□ 0.28
PCDHA1-201ENST00000378133 H2AFYO75367 372 aaKnown RBP16.78■□□□□ 0.28
PCDHA1-201ENST00000378133 NCAM1P13591 858 aa16.78■□□□□ 0.28
PCDHA1-201ENST00000378133 ADSLP30566 484 aaPredicted RBP16.78■□□□□ 0.28
PCDHA1-201ENST00000378133 GLRBP48167 497 aa16.78■□□□□ 0.28
PCDHA1-201ENST00000378133 CLVS1Q8IUQ0 354 aaPredicted RBP16.78■□□□□ 0.28
PCDHA1-201ENST00000378133 KCTD13Q8WZ19 329 aa16.78■□□□□ 0.28
PCDHA1-201ENST00000378133 ZBTB26Q9HCK0 441 aa16.78■□□□□ 0.28
PCDHA1-201ENST00000378133 NRCAMQ92823 1304 aa16.78■□□□□ 0.28
PCDHA1-201ENST00000378133 DNAH12Q6ZR08 3092 aa16.78■□□□□ 0.28
PCDHA1-201ENST00000378133 IQCA1LA6NCM1 817 aa16.77■□□□□ 0.28
PCDHA1-201ENST00000378133 RRN3P2A6NIE6 340 aa16.77■□□□□ 0.28
PCDHA1-201ENST00000378133 PHGDHO43175 533 aaKnown RBP16.77■□□□□ 0.28
PCDHA1-201ENST00000378133 XPOTO43592 962 aaKnown RBP16.77■□□□□ 0.28
PCDHA1-201ENST00000378133 WARSP23381 471 aaKnown RBP16.77■□□□□ 0.28
PCDHA1-201ENST00000378133 GRIA4P48058 902 aa16.77■□□□□ 0.28
PCDHA1-201ENST00000378133 ESRRGP62508 458 aa16.77■□□□□ 0.28
PCDHA1-201ENST00000378133 SEMA3BQ13214 749 aa16.77■□□□□ 0.28
PCDHA1-201ENST00000378133 RFTN1Q14699 578 aaPredicted RBP16.77■□□□□ 0.28
PCDHA1-201ENST00000378133 HERC3Q15034 1050 aa16.77■□□□□ 0.28
PCDHA1-201ENST00000378133 ELMSAN1Q6PJG2 1045 aa16.77■□□□□ 0.28
PCDHA1-201ENST00000378133 GPR141Q7Z602 305 aa16.77■□□□□ 0.28
PCDHA1-201ENST00000378133 DPP9Q86TI2 863 aa16.77■□□□□ 0.28
PCDHA1-201ENST00000378133 SLC29A1Q99808 456 aa16.77■□□□□ 0.28
PCDHA1-201ENST00000378133 GBA3Q9H227 469 aa16.77■□□□□ 0.28
PCDHA1-201ENST00000378133 CLK4Q9HAZ1 481 aaKnown RBP16.77■□□□□ 0.28
PCDHA1-201ENST00000378133 EBF1Q9UH73 591 aa16.77■□□□□ 0.28
PCDHA1-201ENST00000378133 CDYLQ9Y232 598 aa16.77■□□□□ 0.28
PCDHA1-201ENST00000378133 SNX13Q9Y5W8 968 aa16.77■□□□□ 0.28
PCDHA1-201ENST00000378133 GRID2O43424 1007 aa16.77■□□□□ 0.28
PCDHA1-201ENST00000378133 CBFA2T3O75081 653 aa16.77■□□□□ 0.28
PCDHA1-201ENST00000378133 PIGNO95427 931 aa16.77■□□□□ 0.28
PCDHA1-201ENST00000378133 JCHAINP01591 159 aa16.77■□□□□ 0.28
PCDHA1-201ENST00000378133 SMIM10L2AP0DMW4 78 aa16.77■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms