RNA–Protein interactions for RNA: ENST00000377078.2

USP11-202, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 5

Gene USP11, Length 1,077 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-202ENST00000377078 PTAR1Q7Z6K3 402 aaPredicted RBP17.4■□□□□ 0.38
USP11-202ENST00000377078 TTC7BQ86TV6 843 aa17.4■□□□□ 0.38
USP11-202ENST00000377078 EID2Q8N6I1 236 aa17.4■□□□□ 0.38
USP11-202ENST00000377078 ZCCHC14Q8WYQ9 949 aaKnown RBP17.4■□□□□ 0.38
USP11-202ENST00000377078 KLHL32Q96NJ5 620 aa17.4■□□□□ 0.38
USP11-202ENST00000377078 CALN1Q9BXU9 219 aa17.4■□□□□ 0.38
USP11-202ENST00000377078 ZWILCHQ9H900 591 aa17.4■□□□□ 0.38
USP11-202ENST00000377078 KLHL11Q9NVR0 708 aa17.4■□□□□ 0.38
USP11-202ENST00000377078 ZFR2Q9UPR6 939 aaKnown RBP17.4■□□□□ 0.38
USP11-202ENST00000377078 CA5BQ9Y2D0 317 aa17.4■□□□□ 0.38
USP11-202ENST00000377078 MFHAS1Q9Y4C4 1052 aa17.4■□□□□ 0.38
USP11-202ENST00000377078 HS3ST3A1Q9Y663 406 aa17.4■□□□□ 0.38
USP11-202ENST00000377078 USP24Q9UPU5 2620 aa17.4■□□□□ 0.38
USP11-202ENST00000377078 TP53BP1Q12888 1972 aaPredicted RBP17.4■□□□□ 0.38
USP11-202ENST00000377078 SPEGQ15772 3267 aa17.39■□□□□ 0.37
USP11-202ENST00000377078 RNF103O00237 685 aa17.39■□□□□ 0.37
USP11-202ENST00000377078 DKK1O94907 266 aa17.39■□□□□ 0.37
USP11-202ENST00000377078 PAK4O96013 591 aaPredicted RBP17.39■□□□□ 0.37
USP11-202ENST00000377078 C1SP09871 688 aa17.39■□□□□ 0.37
USP11-202ENST00000377078 PCK1P35558 622 aa17.39■□□□□ 0.37
USP11-202ENST00000377078 PBX1P40424 430 aa17.39■□□□□ 0.37
USP11-202ENST00000377078 SUOXP51687 545 aa17.39■□□□□ 0.37
USP11-202ENST00000377078 ZSCAN23Q3MJ62 389 aa17.39■□□□□ 0.37
USP11-202ENST00000377078 CCNI2Q6ZMN8 369 aaPredicted RBP17.39■□□□□ 0.37
USP11-202ENST00000377078 ABI3BPQ7Z7G0 1075 aa17.39■□□□□ 0.37
USP11-202ENST00000377078 DNAAF5Q86Y56 855 aa17.39■□□□□ 0.37
USP11-202ENST00000377078 CPLX3Q8WVH0 158 aa17.39■□□□□ 0.37
USP11-202ENST00000377078 IFT43Q96FT9 208 aa17.39■□□□□ 0.37
USP11-202ENST00000377078 C1QTNF7Q9BXJ2 289 aa17.39■□□□□ 0.37
USP11-202ENST00000377078 LRRC19Q9H756 370 aa17.39■□□□□ 0.37
USP11-202ENST00000377078 SP110Q9HB58 689 aa17.39■□□□□ 0.37
USP11-202ENST00000377078 TOR4AQ9NXH8 423 aa17.39■□□□□ 0.37
USP11-202ENST00000377078 IFNKQ9P0W0 207 aa17.39■□□□□ 0.37
USP11-202ENST00000377078 CAPN11Q9UMQ6 739 aa17.39■□□□□ 0.37
USP11-202ENST00000377078 PCDHGA1Q9Y5H4 931 aa17.39■□□□□ 0.37
USP11-202ENST00000377078 KMT2BQ9UMN6 2715 aaPredicted RBP17.39■□□□□ 0.37
USP11-202ENST00000377078 IGF2RP11717 2491 aa17.38■□□□□ 0.37
USP11-202ENST00000377078 H3BRJ5 948 aa17.38■□□□□ 0.37
USP11-202ENST00000377078 FPGTO14772 594 aa17.38■□□□□ 0.37
USP11-202ENST00000377078 LRCH4O75427 683 aa17.38■□□□□ 0.37
USP11-202ENST00000377078 ARL4AP40617 200 aa17.38■□□□□ 0.37
USP11-202ENST00000377078 RABIFP47224 123 aa17.38■□□□□ 0.37
USP11-202ENST00000377078 HCAR3P49019 387 aa17.38■□□□□ 0.37
USP11-202ENST00000377078 CLDN2P57739 230 aa17.38■□□□□ 0.37
USP11-202ENST00000377078 BNIP3Q12983 259 aa17.38■□□□□ 0.37
USP11-202ENST00000377078 PIGHQ14442 188 aaPredicted RBP17.38■□□□□ 0.37
USP11-202ENST00000377078 NFKBIBQ15653 356 aa17.38■□□□□ 0.37
USP11-202ENST00000377078 KYAT3Q6YP21 454 aaKnown RBP17.38■□□□□ 0.37
USP11-202ENST00000377078 TMPRSS7Q7RTY8 843 aa17.38■□□□□ 0.37
USP11-202ENST00000377078 LZTR1Q8N653 840 aa17.38■□□□□ 0.37
USP11-202ENST00000377078 DENND6BQ8NEG7 585 aa17.38■□□□□ 0.37
USP11-202ENST00000377078 OR13H1Q8NG92 308 aa17.38■□□□□ 0.37
USP11-202ENST00000377078 CXorf40AQ8TE69 158 aa17.38■□□□□ 0.37
USP11-202ENST00000377078 ASB12Q8WXK4 309 aa17.38■□□□□ 0.37
USP11-202ENST00000377078 CELF6Q96J87 481 aaKnown RBP17.38■□□□□ 0.37
USP11-202ENST00000377078 LENG8Q96PV6 779 aaPredicted RBP17.38■□□□□ 0.37
USP11-202ENST00000377078 PEBP4Q96S96 227 aa17.38■□□□□ 0.37
USP11-202ENST00000377078 KCTD15Q96SI1 283 aaPredicted RBP17.38■□□□□ 0.37
USP11-202ENST00000377078 TMEM121BQ9BXQ6 578 aaPredicted RBP17.38■□□□□ 0.37
USP11-202ENST00000377078 CPEB1Q9BZB8 566 aaKnown RBP17.38■□□□□ 0.37
USP11-202ENST00000377078 TRIM7Q9C029 511 aa17.38■□□□□ 0.37
USP11-202ENST00000377078 KLC2Q9H0B6 622 aa17.38■□□□□ 0.37
USP11-202ENST00000377078 DKK3Q9UBP4 350 aa17.38■□□□□ 0.37
USP11-202ENST00000377078 IPO11Q9UI26 975 aaKnown RBP17.38■□□□□ 0.37
USP11-202ENST00000377078 ZMIZ1Q9ULJ6 1067 aa17.38■□□□□ 0.37
USP11-202ENST00000377078 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP17.38■□□□□ 0.37
USP11-202ENST00000377078 TRPM6Q9BX84 2022 aa17.37■□□□□ 0.37
USP11-202ENST00000377078 IGLON5A6NGN9 336 aa17.37■□□□□ 0.37
USP11-202ENST00000377078 PRAMEF11O60813 436 aa17.37■□□□□ 0.37
USP11-202ENST00000377078 PALMO75781 387 aa17.37■□□□□ 0.37
USP11-202ENST00000377078 ALPPL2P10696 532 aa17.37■□□□□ 0.37
USP11-202ENST00000377078 ERCC2P18074 760 aa17.37■□□□□ 0.37
USP11-202ENST00000377078 ABL2P42684 1182 aa17.37■□□□□ 0.37
USP11-202ENST00000377078 PAPOLAP51003 745 aaKnown RBP17.37■□□□□ 0.37
USP11-202ENST00000377078 ELP6Q0PNE2 266 aa17.37■□□□□ 0.37
USP11-202ENST00000377078 RFTN1Q14699 578 aaPredicted RBP17.37■□□□□ 0.37
USP11-202ENST00000377078 CA9Q16790 459 aa17.37■□□□□ 0.37
USP11-202ENST00000377078 BOLA3Q53S33 107 aa17.37■□□□□ 0.37
USP11-202ENST00000377078 HGSNATQ68CP4 663 aa17.37■□□□□ 0.37
USP11-202ENST00000377078 GCNT7Q6ZNI0 430 aa17.37■□□□□ 0.37
USP11-202ENST00000377078 Q6ZSR6 202 aa17.37■□□□□ 0.37
USP11-202ENST00000377078 ARFGAP1Q8N6T3 406 aa17.37■□□□□ 0.37
USP11-202ENST00000377078 PAF1Q8N7H5 531 aa17.37■□□□□ 0.37
USP11-202ENST00000377078 HCAR2Q8TDS4 363 aa17.37■□□□□ 0.37
USP11-202ENST00000377078 EXOC2Q96KP1 924 aa17.37■□□□□ 0.37
USP11-202ENST00000377078 CINPQ9BW66 212 aaPredicted RBP17.37■□□□□ 0.37
USP11-202ENST00000377078 C1QTNF2Q9BXJ5 285 aa17.37■□□□□ 0.37
USP11-202ENST00000377078 IP6K2Q9UHH9 426 aa17.37■□□□□ 0.37
USP11-202ENST00000377078 COL5A1P20908 1838 aaPredicted RBP17.37■□□□□ 0.37
USP11-202ENST00000377078 AKAP13Q12802 2813 aa17.37■□□□□ 0.37
USP11-202ENST00000377078 NEMP2A6NFY4 417 aa17.36■□□□□ 0.37
USP11-202ENST00000377078 H3BM21 787 aa17.36■□□□□ 0.37
USP11-202ENST00000377078 DFFAO00273 331 aa17.36■□□□□ 0.37
USP11-202ENST00000377078 CBFA2T2O43439 604 aa17.36■□□□□ 0.37
USP11-202ENST00000377078 SDC3O75056 442 aa17.36■□□□□ 0.37
USP11-202ENST00000377078 RFPL3O75679 317 aa17.36■□□□□ 0.37
USP11-202ENST00000377078 TM7SF2O76062 418 aa17.36■□□□□ 0.37
USP11-202ENST00000377078 HNF1BP35680 557 aa17.36■□□□□ 0.37
USP11-202ENST00000377078 HNRNPKP61978 463 aaKnown RBP eCLIP17.36■□□□□ 0.37
USP11-202ENST00000377078 ILKQ13418 452 aa17.36■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms