RNA–Protein interactions for RNA: ENST00000375851.6

C9orf47-203, Transcript of chromosome 9 open reading frame 47, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene C9orf47, Length 4,837 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf47-203ENST00000375851 TPSAB1Q15661 275 aa13.75□□□□□ -0.21
C9orf47-203ENST00000375851 INTS6LQ5JSJ4 861 aaKnown RBP13.75□□□□□ -0.21
C9orf47-203ENST00000375851 TRIM69Q86WT6 500 aa13.75□□□□□ -0.21
C9orf47-203ENST00000375851 SELENOMQ8WWX9 145 aa13.75□□□□□ -0.21
C9orf47-203ENST00000375851 RHOJQ9H4E5 214 aa13.75□□□□□ -0.21
C9orf47-203ENST00000375851 VWA7Q9Y334 891 aa13.75□□□□□ -0.21
C9orf47-203ENST00000375851 C2CD4BA6NLJ0 364 aa13.75□□□□□ -0.21
C9orf47-203ENST00000375851 WDR47O94967 919 aa13.75□□□□□ -0.21
C9orf47-203ENST00000375851 VNN1O95497 513 aa13.75□□□□□ -0.21
C9orf47-203ENST00000375851 HNRNPCP07910 306 aaKnown RBP eCLIP13.75□□□□□ -0.21
C9orf47-203ENST00000375851 SLC5A3P53794 718 aa13.75□□□□□ -0.21
C9orf47-203ENST00000375851 SLC16A1P53985 500 aa13.75□□□□□ -0.21
C9orf47-203ENST00000375851 MRPS22P82650 360 aaKnown RBP13.75□□□□□ -0.21
C9orf47-203ENST00000375851 PFKPQ01813 784 aa13.75□□□□□ -0.21
C9orf47-203ENST00000375851 TGM3Q08188 693 aa13.75□□□□□ -0.21
C9orf47-203ENST00000375851 PACS2Q86VP3 889 aa13.75□□□□□ -0.21
C9orf47-203ENST00000375851 MARK4Q96L34 752 aa13.75□□□□□ -0.21
C9orf47-203ENST00000375851 NFKBIZQ9BYH8 718 aa13.75□□□□□ -0.21
C9orf47-203ENST00000375851 HIPK3Q9H422 1215 aa13.75□□□□□ -0.21
C9orf47-203ENST00000375851 CAB39LQ9H9S4 337 aa13.75□□□□□ -0.21
C9orf47-203ENST00000375851 SNX8Q9Y5X2 465 aa13.75□□□□□ -0.21
C9orf47-203ENST00000375851 FZD9O00144 591 aa13.74□□□□□ -0.21
C9orf47-203ENST00000375851 PMM2O15305 246 aa13.74□□□□□ -0.21
C9orf47-203ENST00000375851 ZMPSTE24O75844 475 aa13.74□□□□□ -0.21
C9orf47-203ENST00000375851 PYDC1Q8WXC3 89 aa13.74□□□□□ -0.21
C9orf47-203ENST00000375851 IGFLR1Q9H665 355 aa13.74□□□□□ -0.21
C9orf47-203ENST00000375851 RNPEPL1Q9HAU8 725 aa13.74□□□□□ -0.21
C9orf47-203ENST00000375851 C15orf41Q9Y2V0 281 aa13.74□□□□□ -0.21
C9orf47-203ENST00000375851 FAM208AQ9UK61 1670 aaKnown RBP13.74□□□□□ -0.21
C9orf47-203ENST00000375851 MYBPHLA2RUH7 354 aa13.74□□□□□ -0.21
C9orf47-203ENST00000375851 RASSF9O75901 435 aa13.74□□□□□ -0.21
C9orf47-203ENST00000375851 PPM1AP35813 382 aa13.74□□□□□ -0.21
C9orf47-203ENST00000375851 FASTKD3Q14CZ7 662 aaKnown RBP13.74□□□□□ -0.21
C9orf47-203ENST00000375851 MTSS1LQ765P7 747 aa13.74□□□□□ -0.21
C9orf47-203ENST00000375851 C10orf107Q8IVU9 208 aa13.74□□□□□ -0.21
C9orf47-203ENST00000375851 ZNF516Q92618 1163 aa13.74□□□□□ -0.21
C9orf47-203ENST00000375851 ERLEC1Q96DZ1 483 aa13.74□□□□□ -0.21
C9orf47-203ENST00000375851 PCED1BQ96HM7 432 aa13.74□□□□□ -0.21
C9orf47-203ENST00000375851 ARHGEF4Q9NR80 690 aa13.74□□□□□ -0.21
C9orf47-203ENST00000375851 GMIPQ9P107 970 aa13.74□□□□□ -0.21
C9orf47-203ENST00000375851 LZTS1Q9Y250 596 aa13.74□□□□□ -0.21
C9orf47-203ENST00000375851 ABCC6O95255 1503 aa13.74□□□□□ -0.21
C9orf47-203ENST00000375851 MOXD2PA6NHM9 499 aa13.74□□□□□ -0.21
C9orf47-203ENST00000375851 HNRNPLP14866 589 aaKnown RBP eCLIP13.74□□□□□ -0.21
C9orf47-203ENST00000375851 EPHA3P29320 983 aa13.74□□□□□ -0.21
C9orf47-203ENST00000375851 GPR15P49685 360 aa13.74□□□□□ -0.21
C9orf47-203ENST00000375851 SMARCB1Q12824 385 aa13.74□□□□□ -0.21
C9orf47-203ENST00000375851 LIPMQ5VYY2 423 aa13.74□□□□□ -0.21
C9orf47-203ENST00000375851 ZNF621Q6ZSS3 439 aa13.74□□□□□ -0.21
C9orf47-203ENST00000375851 STK32CQ86UX6 486 aa13.74□□□□□ -0.21
C9orf47-203ENST00000375851 C12orf50Q8NA57 414 aaPredicted RBP13.74□□□□□ -0.21
C9orf47-203ENST00000375851 SH3GL3Q99963 347 aa13.74□□□□□ -0.21
C9orf47-203ENST00000375851 ATP6AP2A0A1C7CYW4 349 aa13.74□□□□□ -0.21
C9orf47-203ENST00000375851 ATP6AP2O75787 350 aa13.74□□□□□ -0.21
C9orf47-203ENST00000375851 CTPS1P17812 591 aa13.74□□□□□ -0.21
C9orf47-203ENST00000375851 CTNNB1P35222 781 aa13.74□□□□□ -0.21
C9orf47-203ENST00000375851 OTOP3Q7RTS5 596 aa13.74□□□□□ -0.21
C9orf47-203ENST00000375851 OR4L1Q8NH43 312 aa13.74□□□□□ -0.21
C9orf47-203ENST00000375851 ELMO1Q92556 727 aa13.74□□□□□ -0.21
C9orf47-203ENST00000375851 IL1RAPL1Q9NZN1 696 aa13.74□□□□□ -0.21
C9orf47-203ENST00000375851 GNPTGQ9UJJ9 305 aa13.74□□□□□ -0.21
C9orf47-203ENST00000375851 ZNF536O15090 1300 aa13.73□□□□□ -0.21
C9orf47-203ENST00000375851 LYPLA1O75608 230 aaPredicted RBP13.73□□□□□ -0.21
C9orf47-203ENST00000375851 PSMG1O95456 288 aa13.73□□□□□ -0.21
C9orf47-203ENST00000375851 GSTM1P09488 218 aa13.73□□□□□ -0.21
C9orf47-203ENST00000375851 FAM58BPP0C7Q3 252 aa13.73□□□□□ -0.21
C9orf47-203ENST00000375851 SELPP16109 830 aa13.73□□□□□ -0.21
C9orf47-203ENST00000375851 LMO2P25791 158 aa13.73□□□□□ -0.21
C9orf47-203ENST00000375851 GABRR2P28476 465 aa13.73□□□□□ -0.21
C9orf47-203ENST00000375851 PPP2R1BP30154 601 aa13.73□□□□□ -0.21
C9orf47-203ENST00000375851 CACNA2D1P54289 1103 aa13.73□□□□□ -0.21
C9orf47-203ENST00000375851 TRIM60Q495X7 471 aa13.73□□□□□ -0.21
C9orf47-203ENST00000375851 SYT12Q8IV01 421 aa13.73□□□□□ -0.21
C9orf47-203ENST00000375851 PYROXD2Q8N2H3 581 aa13.73□□□□□ -0.21
C9orf47-203ENST00000375851 TADA1Q96BN2 335 aa13.73□□□□□ -0.21
C9orf47-203ENST00000375851 ZFYVE19Q96K21 471 aa13.73□□□□□ -0.21
C9orf47-203ENST00000375851 ACBD6Q9BR61 282 aa13.73□□□□□ -0.21
C9orf47-203ENST00000375851 TMPRSS4Q9NRS4 437 aa13.73□□□□□ -0.21
C9orf47-203ENST00000375851 PACSIN3Q9UKS6 424 aa13.73□□□□□ -0.21
C9orf47-203ENST00000375851 LRIG2O94898 1065 aa13.73□□□□□ -0.21
C9orf47-203ENST00000375851 SP2Q02086 613 aa13.73□□□□□ -0.21
C9orf47-203ENST00000375851 EML3Q32P44 896 aa13.73□□□□□ -0.21
C9orf47-203ENST00000375851 RNASEH2BQ5TBB1 312 aaKnown RBP13.73□□□□□ -0.21
C9orf47-203ENST00000375851 MFSD4BQ5TF39 518 aa13.73□□□□□ -0.21
C9orf47-203ENST00000375851 ANKRD22Q5VYY1 191 aa13.73□□□□□ -0.21
C9orf47-203ENST00000375851 CYP4Z1Q86W10 505 aa13.73□□□□□ -0.21
C9orf47-203ENST00000375851 CCDC185Q8N715 623 aa13.73□□□□□ -0.21
C9orf47-203ENST00000375851 SHISA4Q96DD7 197 aa13.73□□□□□ -0.21
C9orf47-203ENST00000375851 MAGED4Q96JG8 741 aa13.73□□□□□ -0.21
C9orf47-203ENST00000375851 TBCDQ9BTW9 1192 aa13.73□□□□□ -0.21
C9orf47-203ENST00000375851 CYLDQ9NQC7 956 aa13.73□□□□□ -0.21
C9orf47-203ENST00000375851 CHKBQ9Y259 395 aa13.73□□□□□ -0.21
C9orf47-203ENST00000375851 SPEF2Q9C093 1822 aa13.73□□□□□ -0.21
C9orf47-203ENST00000375851 CD3EAPO15446 510 aaKnown RBP13.73□□□□□ -0.21
C9orf47-203ENST00000375851 CLOCKO15516 846 aa13.73□□□□□ -0.21
C9orf47-203ENST00000375851 SEPT4O43236 478 aa13.73□□□□□ -0.21
C9orf47-203ENST00000375851 BPGMP07738 259 aa13.73□□□□□ -0.21
C9orf47-203ENST00000375851 COX4I1P13073 169 aa13.73□□□□□ -0.21
C9orf47-203ENST00000375851 GRK4P32298 578 aa13.73□□□□□ -0.21
C9orf47-203ENST00000375851 NEK2P51955 445 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms