RNA–Protein interactions for RNA: ENST00000374879.4

TMEFF1-201, Transcript of transmembrane protein with EGF like and two follistatin like domains 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEFF1, Length 2,611 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEFF1-201ENST00000374879 ATP6AP1Q15904 470 aa20.79■□□□□ 0.92
TMEFF1-201ENST00000374879 CYBRD1Q53TN4 286 aa20.79■□□□□ 0.92
TMEFF1-201ENST00000374879 BSPRYQ5W0U4 402 aa20.79■□□□□ 0.92
TMEFF1-201ENST00000374879 ZNF773Q6PK81 442 aa20.79■□□□□ 0.92
TMEFF1-201ENST00000374879 SLC22A16Q86VW1 577 aa20.79■□□□□ 0.92
TMEFF1-201ENST00000374879 PEX5LQ8IYB4 626 aa20.79■□□□□ 0.92
TMEFF1-201ENST00000374879 HMGCLL1Q8TB92 370 aa20.79■□□□□ 0.92
TMEFF1-201ENST00000374879 LPAR1Q92633 364 aa20.79■□□□□ 0.92
TMEFF1-201ENST00000374879 SEZ6LQ9BYH1 1024 aa20.79■□□□□ 0.92
TMEFF1-201ENST00000374879 PXMP2Q9NR77 195 aa20.79■□□□□ 0.92
TMEFF1-201ENST00000374879 CCM2LQ9NUG4 571 aaPredicted RBP20.79■□□□□ 0.92
TMEFF1-201ENST00000374879 TMEM233B4DJY2 109 aa20.78■□□□□ 0.92
TMEFF1-201ENST00000374879 EI24O14681 340 aa20.78■□□□□ 0.92
TMEFF1-201ENST00000374879 APOL1O14791 398 aa20.78■□□□□ 0.92
TMEFF1-201ENST00000374879 BCAS1O75363 584 aaPredicted RBP20.78■□□□□ 0.92
TMEFF1-201ENST00000374879 UGT2B4P06133 528 aa20.78■□□□□ 0.92
TMEFF1-201ENST00000374879 ARSAP15289 507 aa20.78■□□□□ 0.92
TMEFF1-201ENST00000374879 JUNBP17275 347 aaPredicted RBP20.78■□□□□ 0.92
TMEFF1-201ENST00000374879 GP5P40197 560 aa20.78■□□□□ 0.92
TMEFF1-201ENST00000374879 GARSP41250 739 aaKnown RBP20.78■□□□□ 0.92
TMEFF1-201ENST00000374879 NAGLUP54802 743 aa20.78■□□□□ 0.92
TMEFF1-201ENST00000374879 EML3Q32P44 896 aa20.78■□□□□ 0.92
TMEFF1-201ENST00000374879 ARHGEF16Q5VV41 709 aa20.78■□□□□ 0.92
TMEFF1-201ENST00000374879 ANKRD13AQ8IZ07 590 aa20.78■□□□□ 0.92
TMEFF1-201ENST00000374879 PARP8Q8N3A8 854 aa20.78■□□□□ 0.92
TMEFF1-201ENST00000374879 SHCBP1Q8NEM2 672 aa20.78■□□□□ 0.92
TMEFF1-201ENST00000374879 ARNTL2Q8WYA1 636 aa20.78■□□□□ 0.92
TMEFF1-201ENST00000374879 SLC39A3Q9BRY0 314 aa20.78■□□□□ 0.92
TMEFF1-201ENST00000374879 SARDHQ9UL12 918 aa20.78■□□□□ 0.92
TMEFF1-201ENST00000374879 ACOX3O15254 700 aa20.78■□□□□ 0.92
TMEFF1-201ENST00000374879 H2AFYO75367 372 aaKnown RBP20.78■□□□□ 0.92
TMEFF1-201ENST00000374879 ATG7O95352 703 aa20.78■□□□□ 0.92
TMEFF1-201ENST00000374879 NCAM1P13591 858 aa20.78■□□□□ 0.92
TMEFF1-201ENST00000374879 PLA2G16P53816 162 aa20.78■□□□□ 0.92
TMEFF1-201ENST00000374879 MPP1Q00013 466 aa20.78■□□□□ 0.92
TMEFF1-201ENST00000374879 PRKAA1Q13131 559 aa20.78■□□□□ 0.92
TMEFF1-201ENST00000374879 CCNYL2Q5T2Q4 361 aa20.78■□□□□ 0.92
TMEFF1-201ENST00000374879 SNX31Q8N9S9 440 aa20.78■□□□□ 0.92
TMEFF1-201ENST00000374879 CEP170P1Q96L14 293 aa20.78■□□□□ 0.92
TMEFF1-201ENST00000374879 C9orf16Q9BUW7 83 aa20.78■□□□□ 0.92
TMEFF1-201ENST00000374879 MRPL46Q9H2W6 279 aaKnown RBP20.78■□□□□ 0.92
TMEFF1-201ENST00000374879 AGPAT4Q9NRZ5 378 aa20.78■□□□□ 0.92
TMEFF1-201ENST00000374879 MAP3K20Q9NYL2 800 aaKnown RBP20.78■□□□□ 0.92
TMEFF1-201ENST00000374879 CTDP1Q9Y5B0 961 aaPredicted RBP20.78■□□□□ 0.92
TMEFF1-201ENST00000374879 COL4A5P29400 1685 aa20.78■□□□□ 0.92
TMEFF1-201ENST00000374879 MAGEA12P43365 314 aa20.77■□□□□ 0.92
TMEFF1-201ENST00000374879 STX5Q13190 355 aa20.77■□□□□ 0.92
TMEFF1-201ENST00000374879 MAPK11Q15759 364 aa20.77■□□□□ 0.92
TMEFF1-201ENST00000374879 CDO1Q16878 200 aa20.77■□□□□ 0.92
TMEFF1-201ENST00000374879 C15orf59Q2T9L4 293 aaPredicted RBP20.77■□□□□ 0.92
TMEFF1-201ENST00000374879 SCARA5Q6ZMJ2 495 aa20.77■□□□□ 0.92
TMEFF1-201ENST00000374879 KIAA2013Q8IYS2 634 aa20.77■□□□□ 0.92
TMEFF1-201ENST00000374879 CMTR2Q8IYT2 770 aaKnown RBP20.77■□□□□ 0.92
TMEFF1-201ENST00000374879 PCDH19Q8TAB3 1148 aa20.77■□□□□ 0.92
TMEFF1-201ENST00000374879 RNF38Q9H0F5 515 aa20.77■□□□□ 0.92
TMEFF1-201ENST00000374879 TMEM181Q9P2C4 612 aa20.77■□□□□ 0.92
TMEFF1-201ENST00000374879 MTRRQ9UBK8 725 aa20.77■□□□□ 0.92
TMEFF1-201ENST00000374879 VTI1BQ9UEU0 232 aa20.77■□□□□ 0.92
TMEFF1-201ENST00000374879 RAD54BQ9Y620 910 aa20.77■□□□□ 0.92
TMEFF1-201ENST00000374879 TK2O00142 265 aa20.77■□□□□ 0.92
TMEFF1-201ENST00000374879 WNT10BO00744 389 aa20.77■□□□□ 0.92
TMEFF1-201ENST00000374879 RGS13O14921 159 aa20.77■□□□□ 0.92
TMEFF1-201ENST00000374879 YWHAEP62258 255 aaKnown RBP20.77■□□□□ 0.92
TMEFF1-201ENST00000374879 UGT3A1Q6NUS8 523 aa20.77■□□□□ 0.92
TMEFF1-201ENST00000374879 ILDR2Q71H61 639 aa20.77■□□□□ 0.92
TMEFF1-201ENST00000374879 LSMEM2Q8N112 164 aa20.77■□□□□ 0.92
TMEFF1-201ENST00000374879 ASNSD1Q9NWL6 643 aa20.77■□□□□ 0.92
TMEFF1-201ENST00000374879 CCDC167Q9P0B6 97 aa20.77■□□□□ 0.92
TMEFF1-201ENST00000374879 TLL2Q9Y6L7 1015 aa20.77■□□□□ 0.92
TMEFF1-201ENST00000374879 ILVBLA1L0T0 632 aa20.76■□□□□ 0.91
TMEFF1-201ENST00000374879 RASAL1O95294 804 aa20.76■□□□□ 0.91
TMEFF1-201ENST00000374879 CD19P15391 556 aa20.76■□□□□ 0.91
TMEFF1-201ENST00000374879 ENDOUP21128 410 aaKnown RBP20.76■□□□□ 0.91
TMEFF1-201ENST00000374879 TUBA3CQ13748 450 aa20.76■□□□□ 0.91
TMEFF1-201ENST00000374879 FSTL4Q6MZW2 842 aa20.76■□□□□ 0.91
TMEFF1-201ENST00000374879 AKAP14Q86UN6 197 aa20.76■□□□□ 0.91
TMEFF1-201ENST00000374879 TTC30BQ8N4P2 665 aa20.76■□□□□ 0.91
TMEFF1-201ENST00000374879 PNPT1Q8TCS8 783 aaKnown RBP20.76■□□□□ 0.91
TMEFF1-201ENST00000374879 TRIB2Q92519 343 aa20.76■□□□□ 0.91
TMEFF1-201ENST00000374879 CGRRF1Q99675 332 aa20.76■□□□□ 0.91
TMEFF1-201ENST00000374879 NOL6Q9H6R4 1146 aaKnown RBP20.76■□□□□ 0.91
TMEFF1-201ENST00000374879 THG1LQ9NWX6 298 aaKnown RBP20.76■□□□□ 0.91
TMEFF1-201ENST00000374879 GABBR1Q9UBS5 961 aa20.76■□□□□ 0.91
TMEFF1-201ENST00000374879 PCDHA10Q9Y5I2 948 aa20.76■□□□□ 0.91
TMEFF1-201ENST00000374879 PTPRFP10586 1907 aa20.76■□□□□ 0.91
TMEFF1-201ENST00000374879 NUAK1O60285 661 aa20.76■□□□□ 0.91
TMEFF1-201ENST00000374879 SNAP29O95721 258 aa20.76■□□□□ 0.91
TMEFF1-201ENST00000374879 TGM2P21980 687 aa20.76■□□□□ 0.91
TMEFF1-201ENST00000374879 SLC7A2P52569 658 aa20.76■□□□□ 0.91
TMEFF1-201ENST00000374879 MYL6P60660 151 aa20.76■□□□□ 0.91
TMEFF1-201ENST00000374879 TRIM32Q13049 653 aa20.76■□□□□ 0.91
TMEFF1-201ENST00000374879 SAMD4BQ5PRF9 694 aaKnown RBP20.76■□□□□ 0.91
TMEFF1-201ENST00000374879 GRTP1Q5TC63 336 aa20.76■□□□□ 0.91
TMEFF1-201ENST00000374879 IRAK1BP1Q5VVH5 260 aa20.76■□□□□ 0.91
TMEFF1-201ENST00000374879 CRTC3Q6UUV7 619 aa20.76■□□□□ 0.91
TMEFF1-201ENST00000374879 CLEC14AQ86T13 490 aa20.76■□□□□ 0.91
TMEFF1-201ENST00000374879 GALNT13Q8IUC8 556 aa20.76■□□□□ 0.91
TMEFF1-201ENST00000374879 SPPL2CQ8IUH8 684 aa20.76■□□□□ 0.91
TMEFF1-201ENST00000374879 SIX5Q8N196 739 aa20.76■□□□□ 0.91
TMEFF1-201ENST00000374879 SGCDQ92629 289 aa20.76■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms