RNA–Protein interactions for RNA: ENST00000374198.4

PRPF4-201, Transcript of pre-mRNA processing factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PRPF4, Length 2,787 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4-201ENST00000374198 CRTC3Q6UUV7 619 aa13.05□□□□□ -0.32
PRPF4-201ENST00000374198 SPRED1Q7Z699 444 aa13.05□□□□□ -0.32
PRPF4-201ENST00000374198 ZCCHC7Q8N3Z6 543 aaKnown RBP13.05□□□□□ -0.32
PRPF4-201ENST00000374198 MFSD4AQ8N468 514 aa13.05□□□□□ -0.32
PRPF4-201ENST00000374198 PQLC3Q8N755 202 aa13.05□□□□□ -0.32
PRPF4-201ENST00000374198 TP53INP1Q96A56 240 aa13.05□□□□□ -0.32
PRPF4-201ENST00000374198 FKBP10Q96AY3 582 aa13.05□□□□□ -0.32
PRPF4-201ENST00000374198 IL12RB2Q99665 862 aa13.05□□□□□ -0.32
PRPF4-201ENST00000374198 ZDHHC2Q9UIJ5 367 aa13.05□□□□□ -0.32
PRPF4-201ENST00000374198 OAZ3Q9UMX2 235 aa13.05□□□□□ -0.32
PRPF4-201ENST00000374198 AURKCQ9UQB9 309 aa13.05□□□□□ -0.32
PRPF4-201ENST00000374198 GREB1LQ9C091 1923 aaPredicted RBP13.05□□□□□ -0.32
PRPF4-201ENST00000374198 SLCO1B7G3V0H7 640 aa13.04□□□□□ -0.32
PRPF4-201ENST00000374198 HOXC11O43248 304 aaPredicted RBP13.04□□□□□ -0.32
PRPF4-201ENST00000374198 B4GAT1O43505 415 aa13.04□□□□□ -0.32
PRPF4-201ENST00000374198 EGFRP00533 1210 aa13.04□□□□□ -0.32
PRPF4-201ENST00000374198 CDH5P33151 784 aaPredicted RBP13.04□□□□□ -0.32
PRPF4-201ENST00000374198 KRT6CP48668 564 aa13.04□□□□□ -0.32
PRPF4-201ENST00000374198 RPS6P62753 249 aaKnown RBP13.04□□□□□ -0.32
PRPF4-201ENST00000374198 HTRA3P83110 453 aa13.04□□□□□ -0.32
PRPF4-201ENST00000374198 PRKAA1Q13131 559 aa13.04□□□□□ -0.32
PRPF4-201ENST00000374198 KIZQ2M2Z5 673 aa13.04□□□□□ -0.32
PRPF4-201ENST00000374198 ARL13AQ5H913 290 aaPredicted RBP13.04□□□□□ -0.32
PRPF4-201ENST00000374198 SAMD4BQ5PRF9 694 aaKnown RBP13.04□□□□□ -0.32
PRPF4-201ENST00000374198 USP51Q70EK9 711 aa13.04□□□□□ -0.32
PRPF4-201ENST00000374198 PLD5Q8N7P1 536 aa13.04□□□□□ -0.32
PRPF4-201ENST00000374198 SPERTQ8NA61 448 aa13.04□□□□□ -0.32
PRPF4-201ENST00000374198 ZUFSPQ96AP4 578 aa13.04□□□□□ -0.32
PRPF4-201ENST00000374198 MAGED4Q96JG8 741 aa13.04□□□□□ -0.32
PRPF4-201ENST00000374198 C8orf4Q9NR00 106 aa13.04□□□□□ -0.32
PRPF4-201ENST00000374198 OXSMQ9NWU1 459 aa13.04□□□□□ -0.32
PRPF4-201ENST00000374198 SMPD3Q9NY59 655 aaPredicted RBP13.04□□□□□ -0.32
PRPF4-201ENST00000374198 TXNDC16Q9P2K2 825 aa13.04□□□□□ -0.32
PRPF4-201ENST00000374198 ENPP5Q9UJA9 477 aa13.04□□□□□ -0.32
PRPF4-201ENST00000374198 TOR1BO14657 336 aa13.04□□□□□ -0.32
PRPF4-201ENST00000374198 ACOX3O15254 700 aa13.04□□□□□ -0.32
PRPF4-201ENST00000374198 EXTL3O43909 919 aa13.04□□□□□ -0.32
PRPF4-201ENST00000374198 ITGBL1O95965 494 aaPredicted RBP13.04□□□□□ -0.32
PRPF4-201ENST00000374198 ATP6V1B2P21281 511 aa13.04□□□□□ -0.32
PRPF4-201ENST00000374198 FASP25445 335 aa13.04□□□□□ -0.32
PRPF4-201ENST00000374198 GARSP41250 739 aaKnown RBP13.04□□□□□ -0.32
PRPF4-201ENST00000374198 REP15Q6BDI9 236 aa13.04□□□□□ -0.32
PRPF4-201ENST00000374198 SIAH1Q8IUQ4 282 aa13.04□□□□□ -0.32
PRPF4-201ENST00000374198 CENPNQ96H22 339 aaPredicted RBP13.04□□□□□ -0.32
PRPF4-201ENST00000374198 EGLN2Q96KS0 407 aa13.04□□□□□ -0.32
PRPF4-201ENST00000374198 GMLQ99445 158 aa13.04□□□□□ -0.32
PRPF4-201ENST00000374198 MXRA8Q9BRK3 442 aa13.04□□□□□ -0.32
PRPF4-201ENST00000374198 FUNDC2Q9BWH2 189 aa13.04□□□□□ -0.32
PRPF4-201ENST00000374198 MYOZ2Q9NPC6 264 aa13.04□□□□□ -0.32
PRPF4-201ENST00000374198 STAU2Q9NUL3 570 aaKnown RBP eCLIP13.04□□□□□ -0.32
PRPF4-201ENST00000374198 TMEM181Q9P2C4 612 aa13.04□□□□□ -0.32
PRPF4-201ENST00000374198 PI4KBQ9UBF8 816 aa13.04□□□□□ -0.32
PRPF4-201ENST00000374198 TJP2Q9UDY2 1190 aa13.04□□□□□ -0.32
PRPF4-201ENST00000374198 AP4E1Q9UPM8 1137 aa13.04□□□□□ -0.32
PRPF4-201ENST00000374198 N6AMT1Q9Y5N5 214 aa13.04□□□□□ -0.32
PRPF4-201ENST00000374198 LRRIQ4A6NIV6 560 aa13.03□□□□□ -0.32
PRPF4-201ENST00000374198 EI24O14681 340 aa13.03□□□□□ -0.32
PRPF4-201ENST00000374198 GABBR2O75899 941 aa13.03□□□□□ -0.32
PRPF4-201ENST00000374198 LYPLA2O95372 231 aa13.03□□□□□ -0.32
PRPF4-201ENST00000374198 ABCB1P08183 1280 aaPredicted RBP13.03□□□□□ -0.32
PRPF4-201ENST00000374198 CCND2P30279 289 aa13.03□□□□□ -0.32
PRPF4-201ENST00000374198 MAGEA12P43365 314 aa13.03□□□□□ -0.32
PRPF4-201ENST00000374198 ARCN1P48444 511 aaKnown RBP13.03□□□□□ -0.32
PRPF4-201ENST00000374198 CSE1LP55060 971 aaKnown RBP13.03□□□□□ -0.32
PRPF4-201ENST00000374198 PHC1P78364 1004 aa13.03□□□□□ -0.32
PRPF4-201ENST00000374198 CRADDP78560 199 aa13.03□□□□□ -0.32
PRPF4-201ENST00000374198 DLG2Q15700 870 aa13.03□□□□□ -0.32
PRPF4-201ENST00000374198 SMAD1Q15797 465 aaKnown RBP13.03□□□□□ -0.32
PRPF4-201ENST00000374198 TMTC4Q5T4D3 741 aa13.03□□□□□ -0.32
PRPF4-201ENST00000374198 SLC16A12Q6ZSM3 486 aa13.03□□□□□ -0.32
PRPF4-201ENST00000374198 SLCO6A1Q86UG4 719 aa13.03□□□□□ -0.32
PRPF4-201ENST00000374198 DCLK2Q8N568 766 aa13.03□□□□□ -0.32
PRPF4-201ENST00000374198 SLC4A11Q8NBS3 891 aa13.03□□□□□ -0.32
PRPF4-201ENST00000374198 SHCBP1Q8NEM2 672 aa13.03□□□□□ -0.32
PRPF4-201ENST00000374198 SLC7A14Q8TBB6 771 aa13.03□□□□□ -0.32
PRPF4-201ENST00000374198 LRRN4Q8WUT4 740 aa13.03□□□□□ -0.32
PRPF4-201ENST00000374198 HDAC11Q96DB2 347 aa13.03□□□□□ -0.32
PRPF4-201ENST00000374198 RNF157Q96PX1 679 aa13.03□□□□□ -0.32
PRPF4-201ENST00000374198 SNX25Q9H3E2 840 aa13.03□□□□□ -0.32
PRPF4-201ENST00000374198 SOX17Q9H6I2 414 aaPredicted RBP13.03□□□□□ -0.32
PRPF4-201ENST00000374198 WARS2Q9UGM6 360 aaKnown RBP13.03□□□□□ -0.32
PRPF4-201ENST00000374198 TESMINQ9Y4I5 508 aa13.03□□□□□ -0.32
PRPF4-201ENST00000374198 SNPHO15079 494 aa13.03□□□□□ -0.32
PRPF4-201ENST00000374198 DYRK3O43781 588 aa13.03□□□□□ -0.32
PRPF4-201ENST00000374198 ABCB7O75027 752 aa13.03□□□□□ -0.32
PRPF4-201ENST00000374198 UGT2B11O75310 529 aa13.03□□□□□ -0.32
PRPF4-201ENST00000374198 MAP3K6O95382 1288 aa13.03□□□□□ -0.32
PRPF4-201ENST00000374198 BMP4P12644 408 aa13.03□□□□□ -0.32
PRPF4-201ENST00000374198 PRKCAP17252 672 aa13.03□□□□□ -0.32
PRPF4-201ENST00000374198 GRIA4P48058 902 aa13.03□□□□□ -0.32
PRPF4-201ENST00000374198 ZNF280AP59817 542 aaPredicted RBP13.03□□□□□ -0.32
PRPF4-201ENST00000374198 COPZ1P61923 177 aa13.03□□□□□ -0.32
PRPF4-201ENST00000374198 TSPY1Q01534 308 aa13.03□□□□□ -0.32
PRPF4-201ENST00000374198 MAPK11Q15759 364 aa13.03□□□□□ -0.32
PRPF4-201ENST00000374198 PTPN20Q4JDL3 420 aa13.03□□□□□ -0.32
PRPF4-201ENST00000374198 TMC5Q6UXY8 1006 aa13.03□□□□□ -0.32
PRPF4-201ENST00000374198 AGMOQ6ZNB7 445 aa13.03□□□□□ -0.32
PRPF4-201ENST00000374198 HCAR2Q8TDS4 363 aa13.03□□□□□ -0.32
PRPF4-201ENST00000374198 BSNDQ8WZ55 320 aa13.03□□□□□ -0.32
PRPF4-201ENST00000374198 SLC45A3Q96JT2 553 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms