RNA–Protein interactions for RNA: ENST00000368690.7

CHTOP-203, Transcript of chromatin target of PRMT1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CHTOP, Length 2,165 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHTOP-203ENST00000368690 COG8Q96MW5 612 aa17.62■□□□□ 0.41
CHTOP-203ENST00000368690 AGAP2Q99490 1192 aa17.62■□□□□ 0.41
CHTOP-203ENST00000368690 TDRD1Q9BXT4 1180 aaKnown RBP17.62■□□□□ 0.41
CHTOP-203ENST00000368690 YTHDF1Q9BYJ9 559 aaKnown RBP17.62■□□□□ 0.41
CHTOP-203ENST00000368690 CD320Q9NPF0 282 aa17.62■□□□□ 0.41
CHTOP-203ENST00000368690 CASS4Q9NQ75 786 aa17.62■□□□□ 0.41
CHTOP-203ENST00000368690 TMEM181Q9P2C4 612 aa17.62■□□□□ 0.41
CHTOP-203ENST00000368690 B3GNT3Q9Y2A9 372 aa17.62■□□□□ 0.41
CHTOP-203ENST00000368690 PRORSD1PA6NEY8 169 aa17.61■□□□□ 0.41
CHTOP-203ENST00000368690 ERI2A8K979 691 aaKnown RBP17.61■□□□□ 0.41
CHTOP-203ENST00000368690 LACTBL1A8MY62 500 aa17.61■□□□□ 0.41
CHTOP-203ENST00000368690 ATE1O95260 518 aa17.61■□□□□ 0.41
CHTOP-203ENST00000368690 AP2A1O95782 977 aa17.61■□□□□ 0.41
CHTOP-203ENST00000368690 NELFEP18615 380 aaKnown RBP17.61■□□□□ 0.41
CHTOP-203ENST00000368690 UBA1P22314 1058 aaKnown RBP17.61■□□□□ 0.41
CHTOP-203ENST00000368690 OSTNP61366 133 aa17.61■□□□□ 0.41
CHTOP-203ENST00000368690 GRSF1Q12849 480 aaKnown RBP eCLIP17.61■□□□□ 0.41
CHTOP-203ENST00000368690 FAM110CQ1W6H9 321 aa17.61■□□□□ 0.41
CHTOP-203ENST00000368690 C6orf10Q5SRN2 563 aa17.61■□□□□ 0.41
CHTOP-203ENST00000368690 EEF1DP3Q658K8 133 aa17.61■□□□□ 0.41
CHTOP-203ENST00000368690 REP15Q6BDI9 236 aa17.61■□□□□ 0.41
CHTOP-203ENST00000368690 JADE1Q6IE81 842 aa17.61■□□□□ 0.41
CHTOP-203ENST00000368690 NIPAL1Q6NVV3 410 aa17.61■□□□□ 0.41
CHTOP-203ENST00000368690 DPH6Q7L8W6 267 aa17.61■□□□□ 0.41
CHTOP-203ENST00000368690 DPP9Q86TI2 863 aa17.61■□□□□ 0.41
CHTOP-203ENST00000368690 ZNF567Q8N184 647 aa17.61■□□□□ 0.41
CHTOP-203ENST00000368690 ATXN7L3BQ96GX2 97 aa17.61■□□□□ 0.41
CHTOP-203ENST00000368690 SLX1AQ9BQ83 275 aa17.61■□□□□ 0.41
CHTOP-203ENST00000368690 TUBA1CQ9BQE3 449 aa17.61■□□□□ 0.41
CHTOP-203ENST00000368690 ADAMTS10Q9H324 1103 aa17.61■□□□□ 0.41
CHTOP-203ENST00000368690 CDC14AQ9UNH5 594 aa17.61■□□□□ 0.41
CHTOP-203ENST00000368690 FADS3Q9Y5Q0 445 aa17.61■□□□□ 0.41
CHTOP-203ENST00000368690 TRIP11Q15643 1979 aa17.6■□□□□ 0.41
CHTOP-203ENST00000368690 FBP2O00757 339 aa17.6■□□□□ 0.41
CHTOP-203ENST00000368690 SOCS2O14508 198 aa17.6■□□□□ 0.41
CHTOP-203ENST00000368690 GIPC1O14908 333 aa17.6■□□□□ 0.41
CHTOP-203ENST00000368690 MFSD11O43934 449 aa17.6■□□□□ 0.41
CHTOP-203ENST00000368690 JUNP05412 331 aaKnown RBP17.6■□□□□ 0.41
CHTOP-203ENST00000368690 SLC10A3P09131 477 aa17.6■□□□□ 0.41
CHTOP-203ENST00000368690 FGFR3P22607 806 aa17.6■□□□□ 0.41
CHTOP-203ENST00000368690 SLC12A1Q13621 1099 aa17.6■□□□□ 0.41
CHTOP-203ENST00000368690 LY6KQ17RY6 165 aa17.6■□□□□ 0.41
CHTOP-203ENST00000368690 GK5Q6ZS86 529 aa17.6■□□□□ 0.41
CHTOP-203ENST00000368690 STRADAQ7RTN6 431 aa17.6■□□□□ 0.41
CHTOP-203ENST00000368690 GPR142Q7Z601 462 aa17.6■□□□□ 0.41
CHTOP-203ENST00000368690 PCDH20Q8N6Y1 951 aaKnown RBP17.6■□□□□ 0.41
CHTOP-203ENST00000368690 OR2T34Q8NGX1 318 aa17.6■□□□□ 0.41
CHTOP-203ENST00000368690 OR2T3Q8NH03 318 aa17.6■□□□□ 0.41
CHTOP-203ENST00000368690 TLL2Q9Y6L7 1015 aa17.6■□□□□ 0.41
CHTOP-203ENST00000368690 SLC30A1Q9Y6M5 507 aa17.6■□□□□ 0.41
CHTOP-203ENST00000368690 F5H423 210 aaPredicted RBP17.6■□□□□ 0.41
CHTOP-203ENST00000368690 SNAP91O60641 907 aa17.6■□□□□ 0.41
CHTOP-203ENST00000368690 GOT1P17174 413 aa17.6■□□□□ 0.41
CHTOP-203ENST00000368690 TFE3P19532 575 aaPredicted RBP17.6■□□□□ 0.41
CHTOP-203ENST00000368690 CCR10P46092 362 aa17.6■□□□□ 0.41
CHTOP-203ENST00000368690 PSMD5Q16401 504 aa17.6■□□□□ 0.41
CHTOP-203ENST00000368690 PIWIL4Q7Z3Z4 852 aaKnown RBP17.6■□□□□ 0.41
CHTOP-203ENST00000368690 KCNMB4Q86W47 210 aa17.6■□□□□ 0.41
CHTOP-203ENST00000368690 DHFR2Q86XF0 187 aa17.6■□□□□ 0.41
CHTOP-203ENST00000368690 SCUBE3Q8IX30 993 aa17.6■□□□□ 0.41
CHTOP-203ENST00000368690 ZNF786Q8N393 782 aa17.6■□□□□ 0.41
CHTOP-203ENST00000368690 ZNF513Q8N8E2 541 aaPredicted RBP17.6■□□□□ 0.41
CHTOP-203ENST00000368690 OR52K1Q8NGK4 314 aa17.6■□□□□ 0.41
CHTOP-203ENST00000368690 MARK4Q96L34 752 aa17.6■□□□□ 0.41
CHTOP-203ENST00000368690 DCUN1D5Q9BTE7 237 aa17.6■□□□□ 0.41
CHTOP-203ENST00000368690 RHOJQ9H4E5 214 aa17.6■□□□□ 0.41
CHTOP-203ENST00000368690 CCM2LQ9NUG4 571 aaPredicted RBP17.6■□□□□ 0.41
CHTOP-203ENST00000368690 MFHAS1Q9Y4C4 1052 aa17.6■□□□□ 0.41
CHTOP-203ENST00000368690 HES2Q9Y543 173 aa17.6■□□□□ 0.41
CHTOP-203ENST00000368690 MCM3APO60318 1980 aa17.6■□□□□ 0.41
CHTOP-203ENST00000368690 CROCCQ5TZA2 2017 aa17.59■□□□□ 0.41
CHTOP-203ENST00000368690 PLXNB2O15031 1838 aa17.59■□□□□ 0.41
CHTOP-203ENST00000368690 DLGAP1O14490 977 aa17.59■□□□□ 0.41
CHTOP-203ENST00000368690 FARP2O94887 1054 aaPredicted RBP17.59■□□□□ 0.41
CHTOP-203ENST00000368690 NPY2RP49146 381 aa17.59■□□□□ 0.41
CHTOP-203ENST00000368690 DNAJB13P59910 316 aa17.59■□□□□ 0.41
CHTOP-203ENST00000368690 TNFAIP2Q03169 654 aa17.59■□□□□ 0.41
CHTOP-203ENST00000368690 SLC36A3Q495N2 470 aa17.59■□□□□ 0.41
CHTOP-203ENST00000368690 CENPSQ8N2Z9 138 aa17.59■□□□□ 0.41
CHTOP-203ENST00000368690 TRUB1Q8WWH5 349 aaKnown RBP17.59■□□□□ 0.41
CHTOP-203ENST00000368690 PPWD1Q96BP3 646 aaKnown RBP17.59■□□□□ 0.41
CHTOP-203ENST00000368690 ABHD8Q96I13 439 aa17.59■□□□□ 0.41
CHTOP-203ENST00000368690 SLC25A23Q9BV35 468 aa17.59■□□□□ 0.41
CHTOP-203ENST00000368690 ADI1Q9BV57 179 aa17.59■□□□□ 0.41
CHTOP-203ENST00000368690 SNX25Q9H3E2 840 aa17.59■□□□□ 0.41
CHTOP-203ENST00000368690 SMOXQ9NWM0 555 aa17.59■□□□□ 0.41
CHTOP-203ENST00000368690 TMED5Q9Y3A6 229 aa17.59■□□□□ 0.41
CHTOP-203ENST00000368690 AQP12BA6NM10 295 aa17.59■□□□□ 0.41
CHTOP-203ENST00000368690 DLX3O60479 287 aa17.59■□□□□ 0.41
CHTOP-203ENST00000368690 GABBR2O75899 941 aa17.59■□□□□ 0.41
CHTOP-203ENST00000368690 ZBTB11O95625 1053 aaPredicted RBP17.59■□□□□ 0.41
CHTOP-203ENST00000368690 MPP1Q00013 466 aa17.59■□□□□ 0.41
CHTOP-203ENST00000368690 GALNT2Q10471 571 aa17.59■□□□□ 0.41
CHTOP-203ENST00000368690 MERTKQ12866 999 aa17.59■□□□□ 0.41
CHTOP-203ENST00000368690 PAFAH1B3Q15102 231 aaKnown RBP17.59■□□□□ 0.41
CHTOP-203ENST00000368690 DGKDQ16760 1214 aa17.59■□□□□ 0.41
CHTOP-203ENST00000368690 PPP1R26Q5T8A7 1209 aaPredicted RBP17.59■□□□□ 0.41
CHTOP-203ENST00000368690 LRRC8EQ6NSJ5 796 aa17.59■□□□□ 0.41
CHTOP-203ENST00000368690 IFNL1Q8IU54 200 aa17.59■□□□□ 0.41
CHTOP-203ENST00000368690 AQP12AQ8IXF9 295 aa17.59■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms