RNA–Protein interactions for RNA: ENST00000368439.5

CKS1B-203, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 1 (best) BASIC

Gene CKS1B, Length 912 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-203ENST00000368439 PRLRP16471 622 aa19.21■□□□□ 0.67
CKS1B-203ENST00000368439 AMPD1P23109 780 aa19.21■□□□□ 0.67
CKS1B-203ENST00000368439 IL4RP24394 825 aa19.21■□□□□ 0.67
CKS1B-203ENST00000368439 ARSEP51690 589 aa19.21■□□□□ 0.67
CKS1B-203ENST00000368439 SHC2P98077 582 aa19.21■□□□□ 0.67
CKS1B-203ENST00000368439 HNRNPDQ14103 355 aaKnown RBP19.21■□□□□ 0.67
CKS1B-203ENST00000368439 FGL2Q14314 439 aa19.21■□□□□ 0.67
CKS1B-203ENST00000368439 LRRK1Q38SD2 2015 aa19.21■□□□□ 0.67
CKS1B-203ENST00000368439 PRAMEF14Q5SWL7 426 aa19.21■□□□□ 0.67
CKS1B-203ENST00000368439 GDPD4Q6W3E5 623 aa19.21■□□□□ 0.67
CKS1B-203ENST00000368439 H2AFVQ71UI9 128 aa19.21■□□□□ 0.67
CKS1B-203ENST00000368439 IQCHQ86VS3 1027 aa19.21■□□□□ 0.67
CKS1B-203ENST00000368439 SKA1Q96BD8 255 aa19.21■□□□□ 0.67
CKS1B-203ENST00000368439 EXOC2Q96KP1 924 aa19.21■□□□□ 0.67
CKS1B-203ENST00000368439 KLHL32Q96NJ5 620 aa19.21■□□□□ 0.67
CKS1B-203ENST00000368439 ELF4Q99607 663 aaPredicted RBP19.21■□□□□ 0.67
CKS1B-203ENST00000368439 CPEB1Q9BZB8 566 aaKnown RBP19.21■□□□□ 0.67
CKS1B-203ENST00000368439 BTBD3Q9Y2F9 522 aa19.21■□□□□ 0.67
CKS1B-203ENST00000368439 AREL1O15033 823 aa19.2■□□□□ 0.66
CKS1B-203ENST00000368439 SLC31A1O15431 190 aa19.2■□□□□ 0.66
CKS1B-203ENST00000368439 DFNA5O60443 496 aa19.2■□□□□ 0.66
CKS1B-203ENST00000368439 PROSCO94903 275 aa19.2■□□□□ 0.66
CKS1B-203ENST00000368439 PCDH8O95206 1070 aa19.2■□□□□ 0.66
CKS1B-203ENST00000368439 TMEM253P0C7T8 217 aa19.2■□□□□ 0.66
CKS1B-203ENST00000368439 ARL4AP40617 200 aa19.2■□□□□ 0.66
CKS1B-203ENST00000368439 RGRP47804 291 aa19.2■□□□□ 0.66
CKS1B-203ENST00000368439 CCT8P50990 548 aa19.2■□□□□ 0.66
CKS1B-203ENST00000368439 SIM1P81133 766 aaPredicted RBP19.2■□□□□ 0.66
CKS1B-203ENST00000368439 SLC45A4Q5BKX6 768 aa19.2■□□□□ 0.66
CKS1B-203ENST00000368439 LZTR1Q8N653 840 aa19.2■□□□□ 0.66
CKS1B-203ENST00000368439 CTNNBL1Q8WYA6 563 aaPredicted RBP19.2■□□□□ 0.66
CKS1B-203ENST00000368439 RAB7BQ96AH8 199 aa19.2■□□□□ 0.66
CKS1B-203ENST00000368439 NHEJ1Q9H9Q4 299 aaPredicted RBP19.2■□□□□ 0.66
CKS1B-203ENST00000368439 ZNHIT6Q9NWK9 470 aaKnown RBP19.2■□□□□ 0.66
CKS1B-203ENST00000368439 CTTNBP2NLQ9P2B4 639 aa19.2■□□□□ 0.66
CKS1B-203ENST00000368439 GGT7Q9UJ14 662 aa19.2■□□□□ 0.66
CKS1B-203ENST00000368439 SHROOM3Q8TF72 1996 aa19.2■□□□□ 0.66
CKS1B-203ENST00000368439 DFFAO00273 331 aa19.19■□□□□ 0.66
CKS1B-203ENST00000368439 FLRT2O43155 660 aa19.19■□□□□ 0.66
CKS1B-203ENST00000368439 AKR1B10O60218 316 aa19.19■□□□□ 0.66
CKS1B-203ENST00000368439 TOP3BO95985 862 aaKnown RBP19.19■□□□□ 0.66
CKS1B-203ENST00000368439 PEX11BO96011 259 aa19.19■□□□□ 0.66
CKS1B-203ENST00000368439 CD48P09326 243 aa19.19■□□□□ 0.66
CKS1B-203ENST00000368439 TPM1P09493 284 aa19.19■□□□□ 0.66
CKS1B-203ENST00000368439 RPS21P63220 83 aaKnown RBP19.19■□□□□ 0.66
CKS1B-203ENST00000368439 IL9RQ01113 521 aa19.19■□□□□ 0.66
CKS1B-203ENST00000368439 IL10RBQ08334 325 aa19.19■□□□□ 0.66
CKS1B-203ENST00000368439 OVGP1Q12889 678 aa19.19■□□□□ 0.66
CKS1B-203ENST00000368439 STAT4Q14765 748 aa19.19■□□□□ 0.66
CKS1B-203ENST00000368439 TRIP6Q15654 476 aaKnown RBP19.19■□□□□ 0.66
CKS1B-203ENST00000368439 ATP13A4Q4VNC1 1196 aa19.19■□□□□ 0.66
CKS1B-203ENST00000368439 KIAA1161Q6NSJ0 714 aa19.19■□□□□ 0.66
CKS1B-203ENST00000368439 GLRX5Q86SX6 157 aa19.19■□□□□ 0.66
CKS1B-203ENST00000368439 TSEN2Q8NCE0 465 aaKnown RBP19.19■□□□□ 0.66
CKS1B-203ENST00000368439 FEM1CQ96JP0 617 aa19.19■□□□□ 0.66
CKS1B-203ENST00000368439 DEF6Q9H4E7 631 aa19.19■□□□□ 0.66
CKS1B-203ENST00000368439 ERVMER34-1Q9H9K5 563 aa19.19■□□□□ 0.66
CKS1B-203ENST00000368439 FZD3Q9NPG1 666 aa19.19■□□□□ 0.66
CKS1B-203ENST00000368439 GDF3Q9NR23 364 aa19.19■□□□□ 0.66
CKS1B-203ENST00000368439 SPTLC3Q9NUV7 552 aa19.19■□□□□ 0.66
CKS1B-203ENST00000368439 DKK3Q9UBP4 350 aa19.19■□□□□ 0.66
CKS1B-203ENST00000368439 IPO11Q9UI26 975 aaKnown RBP19.19■□□□□ 0.66
CKS1B-203ENST00000368439 ITM2BQ9Y287 266 aa19.19■□□□□ 0.66
CKS1B-203ENST00000368439 ARID1BQ8NFD5 2236 aaPredicted RBP19.19■□□□□ 0.66
CKS1B-203ENST00000368439 TPRP12270 2363 aaKnown RBP19.18■□□□□ 0.66
CKS1B-203ENST00000368439 TSPAN11A1L157 253 aa19.18■□□□□ 0.66
CKS1B-203ENST00000368439 AKR1B15C9JRZ8 316 aaPredicted RBP19.18■□□□□ 0.66
CKS1B-203ENST00000368439 TSPAN6O43657 245 aa19.18■□□□□ 0.66
CKS1B-203ENST00000368439 BUB1BO60566 1050 aaPredicted RBP19.18■□□□□ 0.66
CKS1B-203ENST00000368439 PIGNO95427 931 aa19.18■□□□□ 0.66
CKS1B-203ENST00000368439 TIMP2P16035 220 aa19.18■□□□□ 0.66
CKS1B-203ENST00000368439 HNRNPA2B1P22626 353 aaKnown RBP19.18■□□□□ 0.66
CKS1B-203ENST00000368439 RXRGP48443 463 aa19.18■□□□□ 0.66
CKS1B-203ENST00000368439 CSNK1DP48730 415 aa19.18■□□□□ 0.66
CKS1B-203ENST00000368439 TAS2R40P59535 323 aa19.18■□□□□ 0.66
CKS1B-203ENST00000368439 RAD51Q06609 339 aa19.18■□□□□ 0.66
CKS1B-203ENST00000368439 SUZ12Q15022 739 aaKnown RBP19.18■□□□□ 0.66
CKS1B-203ENST00000368439 TMCO3Q6UWJ1 677 aa19.18■□□□□ 0.66
CKS1B-203ENST00000368439 GCNT7Q6ZNI0 430 aa19.18■□□□□ 0.66
CKS1B-203ENST00000368439 CNGA4Q8IV77 575 aa19.18■□□□□ 0.66
CKS1B-203ENST00000368439 TC2NQ8N9U0 490 aa19.18■□□□□ 0.66
CKS1B-203ENST00000368439 SETD7Q8WTS6 366 aaKnown RBP19.18■□□□□ 0.66
CKS1B-203ENST00000368439 CCDC42Q96M95 316 aa19.18■□□□□ 0.66
CKS1B-203ENST00000368439 NSMCE3Q96MG7 304 aa19.18■□□□□ 0.66
CKS1B-203ENST00000368439 KLF6Q99612 283 aaPredicted RBP19.18■□□□□ 0.66
CKS1B-203ENST00000368439 MYOCQ99972 504 aa19.18■□□□□ 0.66
CKS1B-203ENST00000368439 C1QTNF2Q9BXJ5 285 aa19.18■□□□□ 0.66
CKS1B-203ENST00000368439 SLC17A9Q9BYT1 436 aa19.18■□□□□ 0.66
CKS1B-203ENST00000368439 TRIM5Q9C035 493 aa19.18■□□□□ 0.66
CKS1B-203ENST00000368439 RBSNQ9H1K0 784 aa19.18■□□□□ 0.66
CKS1B-203ENST00000368439 RCOR3Q9P2K3 495 aaPredicted RBP19.18■□□□□ 0.66
CKS1B-203ENST00000368439 ANGPTL2Q9UKU9 493 aa19.18■□□□□ 0.66
CKS1B-203ENST00000368439 COL5A1P20908 1838 aaPredicted RBP19.18■□□□□ 0.66
CKS1B-203ENST00000368439 CHD8Q9HCK8 2581 aa19.18■□□□□ 0.66
CKS1B-203ENST00000368439 MUSKO15146 869 aa19.17■□□□□ 0.66
CKS1B-203ENST00000368439 RAD51BO15315 384 aa19.17■□□□□ 0.66
CKS1B-203ENST00000368439 PALMO75781 387 aa19.17■□□□□ 0.66
CKS1B-203ENST00000368439 ITIH2P19823 946 aa19.17■□□□□ 0.66
CKS1B-203ENST00000368439 CDH6P55285 790 aa19.17■□□□□ 0.66
CKS1B-203ENST00000368439 FOXC1Q12948 553 aa19.17■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms