RNA–Protein interactions for RNA: ENST00000367142.4

NUCKS1-201, Transcript of nuclear casein kinase and cyclin dependent kinase substrate 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUCKS1, Length 6,496 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUCKS1-201ENST00000367142 TBC1D3FA6NER0 549 aaPredicted RBP15.83■□□□□ 0.13
NUCKS1-201ENST00000367142 TBC1D3LB9A6J9 549 aa15.83■□□□□ 0.13
NUCKS1-201ENST00000367142 TBC1D3HP0C7X1 549 aa15.83■□□□□ 0.13
NUCKS1-201ENST00000367142 UGT2B15P54855 530 aa15.83■□□□□ 0.13
NUCKS1-201ENST00000367142 TBC1D3GQ6DHY5 549 aa15.83■□□□□ 0.13
NUCKS1-201ENST00000367142 TBC1D3CQ6IPX1 549 aa15.83■□□□□ 0.13
NUCKS1-201ENST00000367142 TBC1D3Q8IZP1 549 aaPredicted RBP15.83■□□□□ 0.13
NUCKS1-201ENST00000367142 ADAM28Q9UKQ2 775 aa15.83■□□□□ 0.13
NUCKS1-201ENST00000367142 A0A0A0MRY4 1105 aa15.83■□□□□ 0.12
NUCKS1-201ENST00000367142 CHADO15335 359 aa15.83■□□□□ 0.12
NUCKS1-201ENST00000367142 NTRK1P04629 796 aa15.83■□□□□ 0.12
NUCKS1-201ENST00000367142 ACADLP28330 430 aa15.83■□□□□ 0.12
NUCKS1-201ENST00000367142 NR1D2Q14995 579 aa15.83■□□□□ 0.12
NUCKS1-201ENST00000367142 LIN54Q6MZP7 749 aa15.83■□□□□ 0.12
NUCKS1-201ENST00000367142 C8orf59Q8N0T1 100 aaPredicted RBP15.83■□□□□ 0.12
NUCKS1-201ENST00000367142 SPATA13Q96N96 652 aa15.83■□□□□ 0.12
NUCKS1-201ENST00000367142 TM6SF2Q9BZW4 377 aa15.83■□□□□ 0.12
NUCKS1-201ENST00000367142 NINJ2Q9NZG7 142 aa15.83■□□□□ 0.12
NUCKS1-201ENST00000367142 FAM86B1E9PN63 330 aa15.83■□□□□ 0.12
NUCKS1-201ENST00000367142 FAM86B2P0C5J1 330 aa15.83■□□□□ 0.12
NUCKS1-201ENST00000367142 PSMB4P28070 264 aa15.83■□□□□ 0.12
NUCKS1-201ENST00000367142 RGMBQ6NW40 437 aa15.83■□□□□ 0.12
NUCKS1-201ENST00000367142 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP15.83■□□□□ 0.12
NUCKS1-201ENST00000367142 CATSPERGQ6ZRH7 1159 aa15.83■□□□□ 0.12
NUCKS1-201ENST00000367142 RBM23Q86U06 439 aaKnown RBP15.83■□□□□ 0.12
NUCKS1-201ENST00000367142 BEND7Q8N7W2 519 aaPredicted RBP15.83■□□□□ 0.12
NUCKS1-201ENST00000367142 PTGR2Q8N8N7 351 aaPredicted RBP15.83■□□□□ 0.12
NUCKS1-201ENST00000367142 ZNF563Q8TA94 476 aa15.83■□□□□ 0.12
NUCKS1-201ENST00000367142 FBXO30Q8TB52 745 aa15.83■□□□□ 0.12
NUCKS1-201ENST00000367142 MMADHCQ9H3L0 296 aaPredicted RBP15.83■□□□□ 0.12
NUCKS1-201ENST00000367142 PCDH12Q9NPG4 1184 aa15.83■□□□□ 0.12
NUCKS1-201ENST00000367142 CLIC5Q9NZA1 410 aa15.83■□□□□ 0.12
NUCKS1-201ENST00000367142 FAM205AQ6ZU69 1335 aa15.83■□□□□ 0.12
NUCKS1-201ENST00000367142 KDELR1P24390 212 aa15.83■□□□□ 0.12
NUCKS1-201ENST00000367142 TMEM119Q4V9L6 283 aa15.83■□□□□ 0.12
NUCKS1-201ENST00000367142 PHYKPLQ8IUZ5 450 aa15.83■□□□□ 0.12
NUCKS1-201ENST00000367142 KATNAL2Q8IYT4 538 aa15.83■□□□□ 0.12
NUCKS1-201ENST00000367142 OR10H5Q8NGA6 315 aa15.83■□□□□ 0.12
NUCKS1-201ENST00000367142 VPS35Q96QK1 796 aa15.83■□□□□ 0.12
NUCKS1-201ENST00000367142 FNDC11Q9BVV2 318 aa15.83■□□□□ 0.12
NUCKS1-201ENST00000367142 CHKBQ9Y259 395 aa15.83■□□□□ 0.12
NUCKS1-201ENST00000367142 H0Y858 1186 aa15.83■□□□□ 0.12
NUCKS1-201ENST00000367142 LYNP07948 512 aa15.83■□□□□ 0.12
NUCKS1-201ENST00000367142 ELFN1P0C7U0 828 aa15.83■□□□□ 0.12
NUCKS1-201ENST00000367142 HNF4AP41235 474 aa15.83■□□□□ 0.12
NUCKS1-201ENST00000367142 ACTR3P61158 418 aa15.83■□□□□ 0.12
NUCKS1-201ENST00000367142 NOGQ13253 232 aa15.83■□□□□ 0.12
NUCKS1-201ENST00000367142 SQLEQ14534 574 aa15.83■□□□□ 0.12
NUCKS1-201ENST00000367142 TXNDC11Q6PKC3 985 aa15.83■□□□□ 0.12
NUCKS1-201ENST00000367142 OFCC1Q8IZS5 231 aa15.83■□□□□ 0.12
NUCKS1-201ENST00000367142 ZFRQ96KR1 1074 aaKnown RBP15.83■□□□□ 0.12
NUCKS1-201ENST00000367142 KIAA1522Q9P206 1035 aaPredicted RBP15.83■□□□□ 0.12
NUCKS1-201ENST00000367142 GULP1Q9UBP9 304 aa15.83■□□□□ 0.12
NUCKS1-201ENST00000367142 SETD1BQ9UPS6 1966 aaKnown RBP15.82■□□□□ 0.12
NUCKS1-201ENST00000367142 ATP9AO75110 1047 aa15.82■□□□□ 0.12
NUCKS1-201ENST00000367142 PGK1P00558 417 aa15.82■□□□□ 0.12
NUCKS1-201ENST00000367142 ARHGDIBP52566 201 aa15.82■□□□□ 0.12
NUCKS1-201ENST00000367142 RBBP4Q09028 425 aa15.82■□□□□ 0.12
NUCKS1-201ENST00000367142 FAAP100Q0VG06 881 aa15.82■□□□□ 0.12
NUCKS1-201ENST00000367142 NMD3Q96D46 503 aaKnown RBP15.82■□□□□ 0.12
NUCKS1-201ENST00000367142 ZBTB45Q96K62 511 aaPredicted RBP15.82■□□□□ 0.12
NUCKS1-201ENST00000367142 HSFY1Q96LI6 401 aa15.82■□□□□ 0.12
NUCKS1-201ENST00000367142 FBXO6Q9NRD1 293 aaPredicted RBP15.82■□□□□ 0.12
NUCKS1-201ENST00000367142 PTGFRNQ9P2B2 879 aa15.82■□□□□ 0.12
NUCKS1-201ENST00000367142 GIT1Q9Y2X7 761 aa15.82■□□□□ 0.12
NUCKS1-201ENST00000367142 DLC1Q96QB1 1528 aa15.82■□□□□ 0.12
NUCKS1-201ENST00000367142 PALM2-AKAP2B1ALY0 433 aaPredicted RBP15.82■□□□□ 0.12
NUCKS1-201ENST00000367142 PTGES3LE9PB15 166 aa15.82■□□□□ 0.12
NUCKS1-201ENST00000367142 PIGNO95427 931 aa15.82■□□□□ 0.12
NUCKS1-201ENST00000367142 OMPP47874 163 aa15.82■□□□□ 0.12
NUCKS1-201ENST00000367142 ANXA8L1Q5VT79 327 aa15.82■□□□□ 0.12
NUCKS1-201ENST00000367142 ZDHHC20Q5W0Z9 365 aa15.82■□□□□ 0.12
NUCKS1-201ENST00000367142 TMC5Q6UXY8 1006 aa15.82■□□□□ 0.12
NUCKS1-201ENST00000367142 RP9Q8TA86 221 aaKnown RBP15.82■□□□□ 0.12
NUCKS1-201ENST00000367142 CD101Q93033 1021 aa15.82■□□□□ 0.12
NUCKS1-201ENST00000367142 DMGDHQ9UI17 866 aaKnown RBP15.82■□□□□ 0.12
NUCKS1-201ENST00000367142 SYNPO2Q9UMS6 1093 aa15.82■□□□□ 0.12
NUCKS1-201ENST00000367142 GRM6O15303 877 aa15.82■□□□□ 0.12
NUCKS1-201ENST00000367142 MAGEB3O15480 346 aa15.82■□□□□ 0.12
NUCKS1-201ENST00000367142 USP12O75317 370 aa15.82■□□□□ 0.12
NUCKS1-201ENST00000367142 SERPINB7O75635 380 aa15.82■□□□□ 0.12
NUCKS1-201ENST00000367142 SSTR1P30872 391 aa15.82■□□□□ 0.12
NUCKS1-201ENST00000367142 SEC23AQ15436 765 aa15.82■□□□□ 0.12
NUCKS1-201ENST00000367142 FKBP1CQ5VVH2 108 aa15.82■□□□□ 0.12
NUCKS1-201ENST00000367142 CAVIN3Q969G5 261 aa15.82■□□□□ 0.12
NUCKS1-201ENST00000367142 PDCD10Q9BUL8 212 aa15.82■□□□□ 0.12
NUCKS1-201ENST00000367142 NRDE2Q9H7Z3 1164 aa15.82■□□□□ 0.12
NUCKS1-201ENST00000367142 NECTIN3Q9NQS3 549 aa15.82■□□□□ 0.12
NUCKS1-201ENST00000367142 ULK1O75385 1050 aa15.82■□□□□ 0.12
NUCKS1-201ENST00000367142 MFN2O95140 757 aa15.82■□□□□ 0.12
NUCKS1-201ENST00000367142 TNFAIP8O95379 198 aa15.82■□□□□ 0.12
NUCKS1-201ENST00000367142 TOP3BO95985 862 aaKnown RBP15.82■□□□□ 0.12
NUCKS1-201ENST00000367142 CCNB1P14635 433 aa15.82■□□□□ 0.12
NUCKS1-201ENST00000367142 AKT2P31751 481 aa15.82■□□□□ 0.12
NUCKS1-201ENST00000367142 TSPAN18Q96SJ8 248 aa15.82■□□□□ 0.12
NUCKS1-201ENST00000367142 CDRT15Q96T59 188 aa15.82■□□□□ 0.12
NUCKS1-201ENST00000367142 CDADC1Q9BWV3 514 aa15.82■□□□□ 0.12
NUCKS1-201ENST00000367142 SLC35C2Q9NQQ7 365 aa15.82■□□□□ 0.12
NUCKS1-201ENST00000367142 TIPRLO75663 272 aa15.82■□□□□ 0.12
NUCKS1-201ENST00000367142 PDX1P52945 283 aa15.82■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms