RNA–Protein interactions for RNA: ENST00000363237.1

RNU6-1249P-201, Transcript of RNA, U6 small nuclear 1249, pseudogene, humanhuman

BASIC

Gene RNU6-1249P, Length 111 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1249P-201ENST00000363237 DTX4Q9Y2E6 619 aa3.86□□□□□ -1.79
RNU6-1249P-201ENST00000363237 KLHL20Q9Y2M5 609 aa3.86□□□□□ -1.79
RNU6-1249P-201ENST00000363237 POMT1Q9Y6A1 747 aa3.86□□□□□ -1.79
RNU6-1249P-201ENST00000363237 UTYO14607 1347 aa3.86□□□□□ -1.79
RNU6-1249P-201ENST00000363237 SPATA31A1Q5TZJ5 1347 aa3.86□□□□□ -1.79
RNU6-1249P-201ENST00000363237 LOC102723996A0A087X1L8 192 aa3.85□□□□□ -1.79
RNU6-1249P-201ENST00000363237 ARHGEF37A1IGU5 675 aa3.85□□□□□ -1.79
RNU6-1249P-201ENST00000363237 SNAP23O00161 211 aa3.85□□□□□ -1.79
RNU6-1249P-201ENST00000363237 ETV2O00321 342 aaPredicted RBP3.85□□□□□ -1.79
RNU6-1249P-201ENST00000363237 QSOX1O00391 747 aa3.85□□□□□ -1.79
RNU6-1249P-201ENST00000363237 CPLX1O14810 134 aa3.85□□□□□ -1.79
RNU6-1249P-201ENST00000363237 SUV39H1O43463 412 aa3.85□□□□□ -1.79
RNU6-1249P-201ENST00000363237 PRAMEF2O60811 474 aa3.85□□□□□ -1.79
RNU6-1249P-201ENST00000363237 RAD17O75943 681 aa3.85□□□□□ -1.79
RNU6-1249P-201ENST00000363237 TPPPO94811 219 aa3.85□□□□□ -1.79
RNU6-1249P-201ENST00000363237 CBX6O95503 412 aa3.85□□□□□ -1.79
RNU6-1249P-201ENST00000363237 C22orf31O95567 290 aa3.85□□□□□ -1.79
RNU6-1249P-201ENST00000363237 SNRNP70P08621 437 aaKnown RBP3.85□□□□□ -1.79
RNU6-1249P-201ENST00000363237 ACTN1P12814 892 aa3.85□□□□□ -1.79
RNU6-1249P-201ENST00000363237 P4HA1P13674 534 aa3.85□□□□□ -1.79
RNU6-1249P-201ENST00000363237 JUNBP17275 347 aaPredicted RBP3.85□□□□□ -1.79
RNU6-1249P-201ENST00000363237 DESP17661 470 aa3.85□□□□□ -1.79
RNU6-1249P-201ENST00000363237 CD72P21854 359 aa3.85□□□□□ -1.79
RNU6-1249P-201ENST00000363237 TGM2P21980 687 aa3.85□□□□□ -1.79
RNU6-1249P-201ENST00000363237 TCEA1P23193 301 aaKnown RBP3.85□□□□□ -1.79
RNU6-1249P-201ENST00000363237 DIO1P49895 249 aa3.85□□□□□ -1.79
RNU6-1249P-201ENST00000363237 RAB28P51157 221 aa3.85□□□□□ -1.79
RNU6-1249P-201ENST00000363237 EFNA5P52803 228 aa3.85□□□□□ -1.79
RNU6-1249P-201ENST00000363237 CFHR3Q02985 330 aa3.85□□□□□ -1.79
RNU6-1249P-201ENST00000363237 COASYQ13057 564 aa3.85□□□□□ -1.79
RNU6-1249P-201ENST00000363237 BMPR2Q13873 1038 aa3.85□□□□□ -1.79
RNU6-1249P-201ENST00000363237 RUNX2Q13950 521 aa3.85□□□□□ -1.79
RNU6-1249P-201ENST00000363237 SSPNQ14714 243 aa3.85□□□□□ -1.79
RNU6-1249P-201ENST00000363237 TNIP1Q15025 636 aa3.85□□□□□ -1.79
RNU6-1249P-201ENST00000363237 PPP2R5BQ15173 497 aa3.85□□□□□ -1.79
RNU6-1249P-201ENST00000363237 SHBQ15464 509 aa3.85□□□□□ -1.79
RNU6-1249P-201ENST00000363237 NAB2Q15742 525 aa3.85□□□□□ -1.79
RNU6-1249P-201ENST00000363237 CNGA3Q16281 694 aa3.85□□□□□ -1.79
RNU6-1249P-201ENST00000363237 RPE65Q16518 533 aa3.85□□□□□ -1.79
RNU6-1249P-201ENST00000363237 HYAL4Q2M3T9 481 aa3.85□□□□□ -1.79
RNU6-1249P-201ENST00000363237 TYSND1Q2T9J0 566 aa3.85□□□□□ -1.79
RNU6-1249P-201ENST00000363237 ZNF385BQ569K4 471 aa3.85□□□□□ -1.79
RNU6-1249P-201ENST00000363237 IGSF11Q5DX21 431 aa3.85□□□□□ -1.79
RNU6-1249P-201ENST00000363237 MEX3CQ5U5Q3 659 aaKnown RBP3.85□□□□□ -1.79
RNU6-1249P-201ENST00000363237 PMS2CLQ68D20 193 aa3.85□□□□□ -1.79
RNU6-1249P-201ENST00000363237 SUSD1Q6UWL2 747 aa3.85□□□□□ -1.79
RNU6-1249P-201ENST00000363237 RNF144BQ7Z419 303 aa3.85□□□□□ -1.79
RNU6-1249P-201ENST00000363237 POLNQ7Z5Q5 900 aa3.85□□□□□ -1.79
RNU6-1249P-201ENST00000363237 ADCK2Q7Z695 626 aa3.85□□□□□ -1.79
RNU6-1249P-201ENST00000363237 GPAT4Q86UL3 456 aa3.85□□□□□ -1.79
RNU6-1249P-201ENST00000363237 SGMS1Q86VZ5 419 aa3.85□□□□□ -1.79
RNU6-1249P-201ENST00000363237 SFTPA1Q8IWL2 248 aa3.85□□□□□ -1.79
RNU6-1249P-201ENST00000363237 ZNF619Q8N2I2 560 aa3.85□□□□□ -1.79
RNU6-1249P-201ENST00000363237 TC2NQ8N9U0 490 aa3.85□□□□□ -1.79
RNU6-1249P-201ENST00000363237 LINC01356Q8N9X3 169 aa3.85□□□□□ -1.79
RNU6-1249P-201ENST00000363237 TSPAN14Q8NG11 270 aa3.85□□□□□ -1.79
RNU6-1249P-201ENST00000363237 FIBINQ8TAL6 211 aa3.85□□□□□ -1.79
RNU6-1249P-201ENST00000363237 KCNE4Q8WWG9 221 aa3.85□□□□□ -1.79
RNU6-1249P-201ENST00000363237 ATP6V0A1Q93050 837 aa3.85□□□□□ -1.79
RNU6-1249P-201ENST00000363237 FUBP1Q96AE4 644 aaKnown RBP3.85□□□□□ -1.79
RNU6-1249P-201ENST00000363237 PTERQ96BW5 349 aa3.85□□□□□ -1.79
RNU6-1249P-201ENST00000363237 MOAP1Q96BY2 351 aa3.85□□□□□ -1.79
RNU6-1249P-201ENST00000363237 HDAC11Q96DB2 347 aa3.85□□□□□ -1.79
RNU6-1249P-201ENST00000363237 EDC3Q96F86 508 aaKnown RBP3.85□□□□□ -1.79
RNU6-1249P-201ENST00000363237 LOXL4Q96JB6 756 aa3.85□□□□□ -1.79
RNU6-1249P-201ENST00000363237 PGBD1Q96JS3 809 aa3.85□□□□□ -1.79
RNU6-1249P-201ENST00000363237 GPR78Q96P69 363 aa3.85□□□□□ -1.79
RNU6-1249P-201ENST00000363237 SYT17Q9BSW7 474 aa3.85□□□□□ -1.79
RNU6-1249P-201ENST00000363237 IFIH1Q9BYX4 1025 aaKnown RBP3.85□□□□□ -1.79
RNU6-1249P-201ENST00000363237 KIF9Q9HAQ2 790 aa3.85□□□□□ -1.79
RNU6-1249P-201ENST00000363237 RANGRFQ9HD47 186 aaPredicted RBP3.85□□□□□ -1.79
RNU6-1249P-201ENST00000363237 KLC4Q9NSK0 619 aa3.85□□□□□ -1.79
RNU6-1249P-201ENST00000363237 SIRT3Q9NTG7 399 aaPredicted RBP3.85□□□□□ -1.79
RNU6-1249P-201ENST00000363237 DDX43Q9NXZ2 648 aaKnown RBP3.85□□□□□ -1.79
RNU6-1249P-201ENST00000363237 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP3.85□□□□□ -1.79
RNU6-1249P-201ENST00000363237 GDE1Q9NZC3 331 aa3.85□□□□□ -1.79
RNU6-1249P-201ENST00000363237 COQ3Q9NZJ6 369 aa3.85□□□□□ -1.79
RNU6-1249P-201ENST00000363237 SEMA5BQ9P283 1151 aa3.85□□□□□ -1.79
RNU6-1249P-201ENST00000363237 ABI3Q9P2A4 366 aa3.85□□□□□ -1.79
RNU6-1249P-201ENST00000363237 CACNG4Q9UBN1 327 aa3.85□□□□□ -1.79
RNU6-1249P-201ENST00000363237 CNOT8Q9UFF9 292 aaKnown RBP3.85□□□□□ -1.79
RNU6-1249P-201ENST00000363237 AAR2Q9Y312 384 aaKnown RBP3.85□□□□□ -1.79
RNU6-1249P-201ENST00000363237 REXO2Q9Y3B8 237 aaKnown RBP3.85□□□□□ -1.79
RNU6-1249P-201ENST00000363237 KCTD3Q9Y597 815 aa3.85□□□□□ -1.79
RNU6-1249P-201ENST00000363237 XDHP47989 1333 aa3.85□□□□□ -1.79
RNU6-1249P-201ENST00000363237 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP3.84□□□□□ -1.79
RNU6-1249P-201ENST00000363237 MARCH11A6NNE9 402 aa3.84□□□□□ -1.79
RNU6-1249P-201ENST00000363237 CAPN14A8MX76 684 aa3.84□□□□□ -1.79
RNU6-1249P-201ENST00000363237 DNM1LO00429 736 aa3.84□□□□□ -1.79
RNU6-1249P-201ENST00000363237 CHL1O00533 1208 aa3.84□□□□□ -1.79
RNU6-1249P-201ENST00000363237 RNASET2O00584 256 aaKnown RBP3.84□□□□□ -1.79
RNU6-1249P-201ENST00000363237 SEC14L5O43304 696 aa3.84□□□□□ -1.79
RNU6-1249P-201ENST00000363237 PROM1O43490 865 aa3.84□□□□□ -1.79
RNU6-1249P-201ENST00000363237 KERAO60938 352 aa3.84□□□□□ -1.79
RNU6-1249P-201ENST00000363237 ZC3H11AO75152 810 aaKnown RBP eCLIP3.84□□□□□ -1.79
RNU6-1249P-201ENST00000363237 CDKL5O76039 1030 aa3.84□□□□□ -1.79
RNU6-1249P-201ENST00000363237 CNTN5O94779 1100 aa3.84□□□□□ -1.79
RNU6-1249P-201ENST00000363237 SIX3O95343 332 aaPredicted RBP3.84□□□□□ -1.79
RNU6-1249P-201ENST00000363237 IL1AP01583 271 aa3.84□□□□□ -1.79
RNU6-1249P-201ENST00000363237 TFP02787 698 aa3.84□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms