RNA–Protein interactions for RNA: ENST00000359052.8

SMARCAD1-202, Transcript of SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1, humanhuman

APPRIS ALT1 TSL 1 (best)

Gene SMARCAD1, Length 5,017 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAD1-202ENST00000359052 SYN1P17600 705 aa1.94□□□□□ -2.1
SMARCAD1-202ENST00000359052 CRHR1P34998 444 aa1.94□□□□□ -2.1
SMARCAD1-202ENST00000359052 CCR9P51686 369 aa1.94□□□□□ -2.1
SMARCAD1-202ENST00000359052 THOC5Q13769 683 aaKnown RBP1.94□□□□□ -2.1
SMARCAD1-202ENST00000359052 SNTB1Q13884 538 aaKnown RBP1.94□□□□□ -2.1
SMARCAD1-202ENST00000359052 ACAP1Q15027 740 aa1.94□□□□□ -2.1
SMARCAD1-202ENST00000359052 EEF1AKMT2Q5JPI9 291 aaKnown RBP1.94□□□□□ -2.1
SMARCAD1-202ENST00000359052 RAB40AQ8WXH6 277 aa1.94□□□□□ -2.1
SMARCAD1-202ENST00000359052 SGCDQ92629 289 aa1.94□□□□□ -2.1
SMARCAD1-202ENST00000359052 TNRQ92752 1358 aa1.94□□□□□ -2.1
SMARCAD1-202ENST00000359052 TP53INP1Q96A56 240 aa1.94□□□□□ -2.1
SMARCAD1-202ENST00000359052 PPP1R10Q96QC0 940 aaKnown RBP1.94□□□□□ -2.1
SMARCAD1-202ENST00000359052 KCNK16Q96T55 309 aa1.94□□□□□ -2.1
SMARCAD1-202ENST00000359052 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP1.94□□□□□ -2.1
SMARCAD1-202ENST00000359052 SSBP3Q9BWW4 388 aaPredicted RBP1.94□□□□□ -2.1
SMARCAD1-202ENST00000359052 FRMD8Q9BZ67 464 aaPredicted RBP1.94□□□□□ -2.1
SMARCAD1-202ENST00000359052 PANK3Q9H999 370 aa1.94□□□□□ -2.1
SMARCAD1-202ENST00000359052 PRDM5Q9NQX1 630 aaPredicted RBP1.94□□□□□ -2.1
SMARCAD1-202ENST00000359052 USP40Q9NVE5 1235 aa1.94□□□□□ -2.1
SMARCAD1-202ENST00000359052 UCKL1Q9NWZ5 548 aa1.94□□□□□ -2.1
SMARCAD1-202ENST00000359052 DERAQ9Y315 318 aa1.94□□□□□ -2.1
SMARCAD1-202ENST00000359052 DCHS1Q96JQ0 3298 aa1.94□□□□□ -2.1
SMARCAD1-202ENST00000359052 KIF24Q5T7B8 1368 aa1.94□□□□□ -2.1
SMARCAD1-202ENST00000359052 BCAT2O15382 392 aaPredicted RBP1.94□□□□□ -2.1
SMARCAD1-202ENST00000359052 DIAPH2O60879 1101 aa1.94□□□□□ -2.1
SMARCAD1-202ENST00000359052 ZNF254O75437 659 aa1.94□□□□□ -2.1
SMARCAD1-202ENST00000359052 PTMAP06454 111 aaKnown RBP1.94□□□□□ -2.1
SMARCAD1-202ENST00000359052 PFKLP17858 780 aa1.94□□□□□ -2.1
SMARCAD1-202ENST00000359052 DDX6P26196 483 aaKnown RBP eCLIP1.94□□□□□ -2.1
SMARCAD1-202ENST00000359052 KCNJ6P48051 423 aa1.94□□□□□ -2.1
SMARCAD1-202ENST00000359052 NRIP1P48552 1158 aa1.94□□□□□ -2.1
SMARCAD1-202ENST00000359052 NEDD9Q14511 834 aa1.94□□□□□ -2.1
SMARCAD1-202ENST00000359052 RAB3GAP1Q15042 981 aa1.94□□□□□ -2.1
SMARCAD1-202ENST00000359052 HERC4Q5GLZ8 1057 aaPredicted RBP1.94□□□□□ -2.1
SMARCAD1-202ENST00000359052 KDM4DQ6B0I6 523 aa1.94□□□□□ -2.1
SMARCAD1-202ENST00000359052 LINGO4Q6UY18 593 aa1.94□□□□□ -2.1
SMARCAD1-202ENST00000359052 CXXC5Q7LFL8 322 aaKnown RBP1.94□□□□□ -2.1
SMARCAD1-202ENST00000359052 ARMC9Q7Z3E5 817 aa1.94□□□□□ -2.1
SMARCAD1-202ENST00000359052 PRRT2Q7Z6L0 340 aaPredicted RBP1.94□□□□□ -2.1
SMARCAD1-202ENST00000359052 OLIG1Q8TAK6 271 aa1.94□□□□□ -2.1
SMARCAD1-202ENST00000359052 IRGQQ8WZA9 623 aa1.94□□□□□ -2.1
SMARCAD1-202ENST00000359052 JMJD8Q96S16 334 aa1.94□□□□□ -2.1
SMARCAD1-202ENST00000359052 GFI1Q99684 422 aa1.94□□□□□ -2.1
SMARCAD1-202ENST00000359052 BCL7BQ9BQE9 202 aa1.94□□□□□ -2.1
SMARCAD1-202ENST00000359052 PIGQQ9BRB3 760 aa1.94□□□□□ -2.1
SMARCAD1-202ENST00000359052 IL1RAPL2Q9NP60 686 aa1.94□□□□□ -2.1
SMARCAD1-202ENST00000359052 HELLSQ9NRZ9 838 aa1.94□□□□□ -2.1
SMARCAD1-202ENST00000359052 MRGBPQ9NV56 204 aa1.94□□□□□ -2.1
SMARCAD1-202ENST00000359052 TAS2R10Q9NYW0 307 aa1.94□□□□□ -2.1
SMARCAD1-202ENST00000359052 CPA4Q9UI42 421 aa1.94□□□□□ -2.1
SMARCAD1-202ENST00000359052 MID2Q9UJV3 735 aa1.94□□□□□ -2.1
SMARCAD1-202ENST00000359052 SLC45A2Q9UMX9 530 aa1.94□□□□□ -2.1
SMARCAD1-202ENST00000359052 TNFSF13BQ9Y275 285 aa1.94□□□□□ -2.1
SMARCAD1-202ENST00000359052 LRCH1Q9Y2L9 728 aa1.94□□□□□ -2.1
SMARCAD1-202ENST00000359052 CHMP3Q9Y3E7 222 aa1.94□□□□□ -2.1
SMARCAD1-202ENST00000359052 CHST2Q9Y4C5 530 aa1.94□□□□□ -2.1
SMARCAD1-202ENST00000359052 CHD7Q9P2D1 2997 aa1.94□□□□□ -2.1
SMARCAD1-202ENST00000359052 FAM86B1E9PN63 330 aa1.94□□□□□ -2.1
SMARCAD1-202ENST00000359052 TCERG1O14776 1098 aaKnown RBP1.94□□□□□ -2.1
SMARCAD1-202ENST00000359052 EIF4EBP3O60516 100 aaPredicted RBP1.94□□□□□ -2.1
SMARCAD1-202ENST00000359052 KRT38O76015 456 aa1.94□□□□□ -2.1
SMARCAD1-202ENST00000359052 PDGFRAP16234 1089 aa1.94□□□□□ -2.1
SMARCAD1-202ENST00000359052 GAP43P17677 238 aa1.94□□□□□ -2.1
SMARCAD1-202ENST00000359052 ATP5F1P24539 256 aaPredicted RBP1.94□□□□□ -2.1
SMARCAD1-202ENST00000359052 NPY4RP50391 375 aa1.94□□□□□ -2.1
SMARCAD1-202ENST00000359052 POLE2P56282 527 aa1.94□□□□□ -2.1
SMARCAD1-202ENST00000359052 KIAA1024LP59773 190 aa1.94□□□□□ -2.1
SMARCAD1-202ENST00000359052 DNASE1L3Q13609 305 aa1.94□□□□□ -2.1
SMARCAD1-202ENST00000359052 RRP1BQ14684 758 aaKnown RBP1.94□□□□□ -2.1
SMARCAD1-202ENST00000359052 EFNB3Q15768 340 aa1.94□□□□□ -2.1
SMARCAD1-202ENST00000359052 PCGF3Q3KNV8 242 aa1.94□□□□□ -2.1
SMARCAD1-202ENST00000359052 PRSS36Q5K4E3 855 aa1.94□□□□□ -2.1
SMARCAD1-202ENST00000359052 KDELC1Q6UW63 502 aa1.94□□□□□ -2.1
SMARCAD1-202ENST00000359052 COLCA1Q6ZS62 124 aa1.94□□□□□ -2.1
SMARCAD1-202ENST00000359052 KCTD20Q7Z5Y7 419 aa1.94□□□□□ -2.1
SMARCAD1-202ENST00000359052 SETD9Q8NE22 299 aa1.94□□□□□ -2.1
SMARCAD1-202ENST00000359052 CPT1CQ8TCG5 803 aa1.94□□□□□ -2.1
SMARCAD1-202ENST00000359052 BICD2Q8TD16 824 aa1.94□□□□□ -2.1
SMARCAD1-202ENST00000359052 ZNF398Q8TD17 642 aa1.94□□□□□ -2.1
SMARCAD1-202ENST00000359052 KRTAP4-7Q9BYR0 210 aa1.94□□□□□ -2.1
SMARCAD1-202ENST00000359052 GBP3Q9H0R5 595 aa1.94□□□□□ -2.1
SMARCAD1-202ENST00000359052 HCFC1R1Q9NWW0 138 aa1.94□□□□□ -2.1
SMARCAD1-202ENST00000359052 TMOD3Q9NYL9 352 aa1.94□□□□□ -2.1
SMARCAD1-202ENST00000359052 ZMAT5Q9UDW3 170 aaKnown RBP1.94□□□□□ -2.1
SMARCAD1-202ENST00000359052 LCMT1Q9UIC8 334 aa1.94□□□□□ -2.1
SMARCAD1-202ENST00000359052 ASPMQ8IZT6 3477 aa1.94□□□□□ -2.1
SMARCAD1-202ENST00000359052 ZNF106Q9H2Y7 1883 aaKnown RBP1.93□□□□□ -2.1
SMARCAD1-202ENST00000359052 CARMIL3Q8ND23 1372 aa1.93□□□□□ -2.1
SMARCAD1-202ENST00000359052 A0A1W2PP11 408 aa1.93□□□□□ -2.1
SMARCAD1-202ENST00000359052 DCDC2BA2VCK2 349 aa1.93□□□□□ -2.1
SMARCAD1-202ENST00000359052 MBD3L5A6NJ08 208 aaPredicted RBP1.93□□□□□ -2.1
SMARCAD1-202ENST00000359052 KRIT1O00522 736 aa1.93□□□□□ -2.1
SMARCAD1-202ENST00000359052 ADH6P28332 368 aa1.93□□□□□ -2.1
SMARCAD1-202ENST00000359052 THPOP40225 353 aa1.93□□□□□ -2.1
SMARCAD1-202ENST00000359052 PTENP60484 403 aa1.93□□□□□ -2.1
SMARCAD1-202ENST00000359052 PPP2CBP62714 309 aa1.93□□□□□ -2.1
SMARCAD1-202ENST00000359052 PPP2CAP67775 309 aa1.93□□□□□ -2.1
SMARCAD1-202ENST00000359052 INSM1Q01101 510 aaPredicted RBP1.93□□□□□ -2.1
SMARCAD1-202ENST00000359052 MC2RQ01718 297 aa1.93□□□□□ -2.1
SMARCAD1-202ENST00000359052 NCBP1Q09161 790 aaKnown RBP1.93□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms