RNA–Protein interactions for RNA: ENST00000357388.7

SMC4-202, Transcript of structural maintenance of chromosomes 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC4, Length 5,471 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-202ENST00000357388 HIST1H2ABP04908 130 aa12.96□□□□□ -0.34
SMC4-202ENST00000357388 CSF1RP07333 972 aa12.96□□□□□ -0.34
SMC4-202ENST00000357388 TUFMP49411 452 aaKnown RBP12.96□□□□□ -0.34
SMC4-202ENST00000357388 ALDH3A2P51648 485 aa12.96□□□□□ -0.34
SMC4-202ENST00000357388 LSM3P62310 102 aaKnown RBP12.96□□□□□ -0.34
SMC4-202ENST00000357388 POLR2LP62875 67 aaKnown RBP12.96□□□□□ -0.34
SMC4-202ENST00000357388 PTPN11Q06124 597 aaPredicted RBP12.96□□□□□ -0.34
SMC4-202ENST00000357388 PPM1LQ5SGD2 360 aa12.96□□□□□ -0.34
SMC4-202ENST00000357388 HIST3H2AQ7L7L0 130 aa12.96□□□□□ -0.34
SMC4-202ENST00000357388 DNERQ8NFT8 737 aa12.96□□□□□ -0.34
SMC4-202ENST00000357388 OR8H1Q8NGG4 311 aa12.96□□□□□ -0.34
SMC4-202ENST00000357388 HDAC7Q8WUI4 952 aa12.96□□□□□ -0.34
SMC4-202ENST00000357388 HIST1H2ACQ93077 130 aa12.96□□□□□ -0.34
SMC4-202ENST00000357388 TBCDQ9BTW9 1192 aa12.96□□□□□ -0.34
SMC4-202ENST00000357388 SAE1Q9UBE0 346 aaPredicted RBP12.96□□□□□ -0.34
SMC4-202ENST00000357388 DDX3XO00571 662 aaKnown RBP eCLIP12.95□□□□□ -0.344e-78■■■■■ 527.9
SMC4-202ENST00000357388 TRAFD1O14545 582 aaPredicted RBP12.95□□□□□ -0.34
SMC4-202ENST00000357388 SLC9A3R1O14745 358 aaPredicted RBP12.95□□□□□ -0.34
SMC4-202ENST00000357388 TPP1O14773 563 aa12.95□□□□□ -0.34
SMC4-202ENST00000357388 SNAPC5O75971 98 aa12.95□□□□□ -0.34
SMC4-202ENST00000357388 VAPBO95292 243 aa12.95□□□□□ -0.34
SMC4-202ENST00000357388 FGFR1P11362 822 aa12.95□□□□□ -0.34
SMC4-202ENST00000357388 EIF5AP63241 154 aaKnown RBP12.95□□□□□ -0.34
SMC4-202ENST00000357388 OVOS1Q6IE37 1185 aa12.95□□□□□ -0.34
SMC4-202ENST00000357388 ZNF662Q6ZS27 426 aa12.95□□□□□ -0.34
SMC4-202ENST00000357388 PIWIL4Q7Z3Z4 852 aaKnown RBP12.95□□□□□ -0.34
SMC4-202ENST00000357388 CLEC10AQ8IUN9 316 aa12.95□□□□□ -0.34
SMC4-202ENST00000357388 TEX47Q8TBZ9 253 aa12.95□□□□□ -0.34
SMC4-202ENST00000357388 PHF10Q8WUB8 498 aaKnown RBP12.95□□□□□ -0.34
SMC4-202ENST00000357388 KAT2BQ92831 832 aa12.95□□□□□ -0.34
SMC4-202ENST00000357388 COG5Q9UP83 839 aa12.95□□□□□ -0.34
SMC4-202ENST00000357388 LYVE1Q9Y5Y7 322 aa12.95□□□□□ -0.34
SMC4-202ENST00000357388 MSH4O15457 936 aa12.95□□□□□ -0.34
SMC4-202ENST00000357388 AXLP30530 894 aa12.95□□□□□ -0.34
SMC4-202ENST00000357388 DEFB128Q7Z7B8 93 aa12.95□□□□□ -0.34
SMC4-202ENST00000357388 TMCO6Q96DC7 493 aa12.95□□□□□ -0.34
SMC4-202ENST00000357388 BTBD9Q96Q07 612 aa12.95□□□□□ -0.34
SMC4-202ENST00000357388 IL22Q9GZX6 179 aa12.95□□□□□ -0.34
SMC4-202ENST00000357388 CDHR5Q9HBB8 845 aa12.95□□□□□ -0.34
SMC4-202ENST00000357388 MCUBQ9NWR8 336 aa12.95□□□□□ -0.34
SMC4-202ENST00000357388 PCDHGC5Q9Y5F6 944 aa12.95□□□□□ -0.34
SMC4-202ENST00000357388 FAM237BA0A1B0GVD1 139 aa12.95□□□□□ -0.34
SMC4-202ENST00000357388 HDAC3O15379 428 aa12.95□□□□□ -0.34
SMC4-202ENST00000357388 PSIP1O75475 530 aaKnown RBP12.95□□□□□ -0.34
SMC4-202ENST00000357388 GCNT1Q02742 428 aa12.95□□□□□ -0.34
SMC4-202ENST00000357388 BLMHQ13867 455 aa12.95□□□□□ -0.34
SMC4-202ENST00000357388 GIT2Q14161 759 aa12.95□□□□□ -0.34
SMC4-202ENST00000357388 DPYSL3Q14195 570 aa12.95□□□□□ -0.34
SMC4-202ENST00000357388 ZIK1Q3SY52 487 aaPredicted RBP12.95□□□□□ -0.34
SMC4-202ENST00000357388 FBXO47Q5MNV8 452 aa12.95□□□□□ -0.34
SMC4-202ENST00000357388 CES5AQ6NT32 575 aa12.95□□□□□ -0.34
SMC4-202ENST00000357388 TXNDC11Q6PKC3 985 aa12.95□□□□□ -0.34
SMC4-202ENST00000357388 PPP1R16AQ96I34 528 aa12.95□□□□□ -0.34
SMC4-202ENST00000357388 APOL2Q9BQE5 337 aa12.95□□□□□ -0.34
SMC4-202ENST00000357388 S100A14Q9HCY8 104 aa12.95□□□□□ -0.34
SMC4-202ENST00000357388 SPATA31A1Q5TZJ5 1347 aa12.95□□□□□ -0.34
SMC4-202ENST00000357388 METTL18O95568 372 aa12.95□□□□□ -0.34
SMC4-202ENST00000357388 ENO2P09104 434 aaPredicted RBP12.95□□□□□ -0.34
SMC4-202ENST00000357388 TGFB3P10600 412 aa12.95□□□□□ -0.34
SMC4-202ENST00000357388 ATF4P18848 351 aaPredicted RBP12.95□□□□□ -0.34
SMC4-202ENST00000357388 CLCN5P51795 746 aa12.95□□□□□ -0.34
SMC4-202ENST00000357388 POU6F1Q14863 301 aa12.95□□□□□ -0.34
SMC4-202ENST00000357388 CRTC3Q6UUV7 619 aa12.95□□□□□ -0.34
SMC4-202ENST00000357388 METTL7BQ6UX53 244 aa12.95□□□□□ -0.34
SMC4-202ENST00000357388 ZCCHC23Q6ZST2 131 aa12.95□□□□□ -0.34
SMC4-202ENST00000357388 TP53INP1Q96A56 240 aa12.95□□□□□ -0.34
SMC4-202ENST00000357388 ERMAPQ96PL5 475 aaPredicted RBP12.95□□□□□ -0.34
SMC4-202ENST00000357388 FAM129BQ96TA1 746 aa12.95□□□□□ -0.34
SMC4-202ENST00000357388 MTMR12Q9C0I1 747 aa12.95□□□□□ -0.34
SMC4-202ENST00000357388 SLC9A8Q9Y2E8 581 aa12.95□□□□□ -0.34
SMC4-202ENST00000357388 BTN3A1O00481 513 aa12.95□□□□□ -0.34
SMC4-202ENST00000357388 TGDSO95455 350 aa12.95□□□□□ -0.34
SMC4-202ENST00000357388 MAPKAPK3Q16644 382 aa12.95□□□□□ -0.34
SMC4-202ENST00000357388 ULK3Q6PHR2 472 aa12.95□□□□□ -0.34
SMC4-202ENST00000357388 CYP20A1Q6UW02 462 aa12.95□□□□□ -0.34
SMC4-202ENST00000357388 DNAJC14Q6Y2X3 702 aaPredicted RBP12.95□□□□□ -0.34
SMC4-202ENST00000357388 SLC39A8Q9C0K1 460 aa12.95□□□□□ -0.34
SMC4-202ENST00000357388 MSRAQ9UJ68 235 aa12.95□□□□□ -0.34
SMC4-202ENST00000357388 PCDHGA4Q9Y5G9 962 aa12.95□□□□□ -0.34
SMC4-202ENST00000357388 RAMP2O60895 175 aa12.94□□□□□ -0.34
SMC4-202ENST00000357388 WEE1P30291 646 aa12.94□□□□□ -0.34
SMC4-202ENST00000357388 CBX5P45973 191 aa12.94□□□□□ -0.34
SMC4-202ENST00000357388 SCNN1BP51168 640 aa12.94□□□□□ -0.34
SMC4-202ENST00000357388 TBX4P57082 545 aa12.94□□□□□ -0.34
SMC4-202ENST00000357388 ACTR3P61158 418 aa12.94□□□□□ -0.34
SMC4-202ENST00000357388 PACS1Q6VY07 963 aa12.94□□□□□ -0.34
SMC4-202ENST00000357388 SLC47A2Q86VL8 602 aa12.94□□□□□ -0.34
SMC4-202ENST00000357388 ZC3H10Q96K80 434 aaKnown RBP12.94□□□□□ -0.34
SMC4-202ENST00000357388 SERPINB11Q96P15 392 aa12.94□□□□□ -0.34
SMC4-202ENST00000357388 SYT15Q9BQS2 421 aa12.94□□□□□ -0.34
SMC4-202ENST00000357388 TDRD1Q9BXT4 1180 aaKnown RBP12.94□□□□□ -0.34
SMC4-202ENST00000357388 ATXN3LQ9H3M9 355 aa12.94□□□□□ -0.34
SMC4-202ENST00000357388 C12orf4Q9NQ89 552 aa12.94□□□□□ -0.34
SMC4-202ENST00000357388 UPB1Q9UBR1 384 aa12.94□□□□□ -0.34
SMC4-202ENST00000357388 VPS4AQ9UN37 437 aa12.94□□□□□ -0.34
SMC4-202ENST00000357388 FAM50BQ9Y247 325 aa12.94□□□□□ -0.34
SMC4-202ENST00000357388 PRELID1Q9Y255 219 aa12.94□□□□□ -0.34
SMC4-202ENST00000357388 CLDN25C9JDP6 229 aa12.94□□□□□ -0.34
SMC4-202ENST00000357388 PRMT3O60678 531 aa12.94□□□□□ -0.34
SMC4-202ENST00000357388 ENDOD1O94919 500 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms