RNA–Protein interactions for RNA: ENST00000357250.10

COL9A1-202, Transcript of collagen type IX alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL9A1, Length 4,761 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-202ENST00000357250 ATXN3LQ9H3M9 355 aa11.86□□□□□ -0.51
COL9A1-202ENST00000357250 OSGEPL1Q9H4B0 414 aa11.86□□□□□ -0.51
COL9A1-202ENST00000357250 COL20A1Q9P218 1284 aa11.86□□□□□ -0.51
COL9A1-202ENST00000357250 BBIP1A8MTZ0 92 aa11.86□□□□□ -0.51
COL9A1-202ENST00000357250 ACADMP11310 421 aa11.86□□□□□ -0.51
COL9A1-202ENST00000357250 ITGA2P17301 1181 aa11.86□□□□□ -0.51
COL9A1-202ENST00000357250 FKBP1BP68106 108 aa11.86□□□□□ -0.51
COL9A1-202ENST00000357250 PRKG2Q13237 762 aa11.86□□□□□ -0.51
COL9A1-202ENST00000357250 PTGR2Q8N8N7 351 aaPredicted RBP11.86□□□□□ -0.51
COL9A1-202ENST00000357250 ZFP28Q8NHY6 868 aa11.86□□□□□ -0.51
COL9A1-202ENST00000357250 SELENOMQ8WWX9 145 aa11.86□□□□□ -0.51
COL9A1-202ENST00000357250 ZBTB10Q96DT7 871 aa11.86□□□□□ -0.51
COL9A1-202ENST00000357250 DEPDC7Q96QD5 511 aa11.86□□□□□ -0.51
COL9A1-202ENST00000357250 DUSP16Q9BY84 665 aa11.86□□□□□ -0.51
COL9A1-202ENST00000357250 HMX1Q9NP08 348 aaPredicted RBP11.86□□□□□ -0.51
COL9A1-202ENST00000357250 DIABLOQ9NR28 239 aa11.86□□□□□ -0.51
COL9A1-202ENST00000357250 HES2Q9Y543 173 aa11.86□□□□□ -0.51
COL9A1-202ENST00000357250 SESN1Q9Y6P5 492 aa11.86□□□□□ -0.51
COL9A1-202ENST00000357250 OR6C75A6NL08 312 aa11.85□□□□□ -0.51
COL9A1-202ENST00000357250 USP12O75317 370 aa11.85□□□□□ -0.51
COL9A1-202ENST00000357250 MTA2O94776 668 aa11.85□□□□□ -0.51
COL9A1-202ENST00000357250 OTCP00480 354 aa11.85□□□□□ -0.51
COL9A1-202ENST00000357250 ERCC2P18074 760 aa11.85□□□□□ -0.51
COL9A1-202ENST00000357250 ITGB6P18564 788 aa11.85□□□□□ -0.51
COL9A1-202ENST00000357250 POLR2EP19388 210 aaKnown RBP11.85□□□□□ -0.51
COL9A1-202ENST00000357250 NR1H2P55055 460 aa11.85□□□□□ -0.51
COL9A1-202ENST00000357250 JAG1P78504 1218 aa11.85□□□□□ -0.51
COL9A1-202ENST00000357250 NOMO1Q15155 1222 aa11.85□□□□□ -0.51
COL9A1-202ENST00000357250 C16orf46Q6P387 395 aa11.85□□□□□ -0.51
COL9A1-202ENST00000357250 BHLHB9Q6PI77 547 aa11.85□□□□□ -0.51
COL9A1-202ENST00000357250 DCLRE1AQ6PJP8 1040 aa11.85□□□□□ -0.51
COL9A1-202ENST00000357250 FBXW8Q8N3Y1 598 aa11.85□□□□□ -0.51
COL9A1-202ENST00000357250 HEXDCQ8WVB3 486 aa11.85□□□□□ -0.51
COL9A1-202ENST00000357250 MBOAT7Q96N66 472 aa11.85□□□□□ -0.51
COL9A1-202ENST00000357250 ALG9Q9H6U8 611 aa11.85□□□□□ -0.51
COL9A1-202ENST00000357250 ATP13A3Q9H7F0 1226 aa11.85□□□□□ -0.51
COL9A1-202ENST00000357250 FBXO5Q9UKT4 447 aa11.85□□□□□ -0.51
COL9A1-202ENST00000357250 ENTPD4Q9Y227 616 aa11.85□□□□□ -0.51
COL9A1-202ENST00000357250 PCDH8O95206 1070 aa11.85□□□□□ -0.51
COL9A1-202ENST00000357250 KLRC2P26717 231 aa11.85□□□□□ -0.51
COL9A1-202ENST00000357250 NUP62P37198 522 aaPredicted RBP11.85□□□□□ -0.51
COL9A1-202ENST00000357250 GRIA4P48058 902 aa11.85□□□□□ -0.51
COL9A1-202ENST00000357250 PWP1Q13610 501 aa11.85□□□□□ -0.51
COL9A1-202ENST00000357250 ZC3H12AQ5D1E8 599 aaKnown RBP11.85□□□□□ -0.51
COL9A1-202ENST00000357250 LCLAT1Q6UWP7 414 aa11.85□□□□□ -0.51
COL9A1-202ENST00000357250 DHDDSQ86SQ9 333 aa11.85□□□□□ -0.51
COL9A1-202ENST00000357250 PACS2Q86VP3 889 aa11.85□□□□□ -0.51
COL9A1-202ENST00000357250 CLYBLQ8N0X4 340 aa11.85□□□□□ -0.51
COL9A1-202ENST00000357250 ZNF614Q8N883 585 aa11.85□□□□□ -0.51
COL9A1-202ENST00000357250 BHLHE22Q8NFJ8 381 aaPredicted RBP11.85□□□□□ -0.51
COL9A1-202ENST00000357250 CD101Q93033 1021 aa11.85□□□□□ -0.51
COL9A1-202ENST00000357250 TEKT5Q96M29 485 aa11.85□□□□□ -0.51
COL9A1-202ENST00000357250 KLHL25Q9H0H3 589 aa11.85□□□□□ -0.51
COL9A1-202ENST00000357250 SSU72Q9NP77 194 aaKnown RBP11.85□□□□□ -0.51
COL9A1-202ENST00000357250 MAN1C1Q9NR34 630 aa11.85□□□□□ -0.51
COL9A1-202ENST00000357250 MYL12BO14950 172 aa11.85□□□□□ -0.51
COL9A1-202ENST00000357250 TFEBP19484 476 aa11.85□□□□□ -0.51
COL9A1-202ENST00000357250 SCNN1GP51170 649 aa11.85□□□□□ -0.51
COL9A1-202ENST00000357250 MRPS22P82650 360 aaKnown RBP11.85□□□□□ -0.51
COL9A1-202ENST00000357250 TAB1Q15750 504 aa11.85□□□□□ -0.51
COL9A1-202ENST00000357250 PFKFB4Q16877 469 aa11.85□□□□□ -0.51
COL9A1-202ENST00000357250 SLC25A52Q3SY17 297 aa11.85□□□□□ -0.51
COL9A1-202ENST00000357250 SETMARQ53H47 684 aaPredicted RBP11.85□□□□□ -0.51
COL9A1-202ENST00000357250 TRIQKQ629K1 86 aa11.85□□□□□ -0.51
COL9A1-202ENST00000357250 TYW3Q6IPR3 259 aaKnown RBP11.85□□□□□ -0.51
COL9A1-202ENST00000357250 B3GNT6Q6ZMB0 384 aa11.85□□□□□ -0.51
COL9A1-202ENST00000357250 HJURPQ8NCD3 748 aaPredicted RBP11.85□□□□□ -0.51
COL9A1-202ENST00000357250 WDR36Q8NI36 951 aaKnown RBP11.85□□□□□ -0.51
COL9A1-202ENST00000357250 RHOJQ9H4E5 214 aa11.85□□□□□ -0.51
COL9A1-202ENST00000357250 SERHL2Q9H4I8 314 aa11.85□□□□□ -0.51
COL9A1-202ENST00000357250 SERHLQ9NQF3 203 aa11.85□□□□□ -0.51
COL9A1-202ENST00000357250 REXO2Q9Y3B8 237 aaKnown RBP11.85□□□□□ -0.51
COL9A1-202ENST00000357250 FAM237BA0A1B0GVD1 139 aa11.84□□□□□ -0.51
COL9A1-202ENST00000357250 PDE9AO76083 593 aa11.84□□□□□ -0.51
COL9A1-202ENST00000357250 HSMCR30P0CW71 290 aa11.84□□□□□ -0.51
COL9A1-202ENST00000357250 SMIM10L2AP0DMW4 78 aa11.84□□□□□ -0.51
COL9A1-202ENST00000357250 SMIM10L2BP0DMW5 78 aa11.84□□□□□ -0.51
COL9A1-202ENST00000357250 COX7A2P14406 83 aa11.84□□□□□ -0.51
COL9A1-202ENST00000357250 ALDH9A1P49189 494 aa11.84□□□□□ -0.51
COL9A1-202ENST00000357250 HADHBP55084 474 aaKnown RBP11.84□□□□□ -0.51
COL9A1-202ENST00000357250 DCTN2Q13561 401 aaKnown RBP11.84□□□□□ -0.51
COL9A1-202ENST00000357250 PPM1LQ5SGD2 360 aa11.84□□□□□ -0.51
COL9A1-202ENST00000357250 ZNF549Q6P9A3 640 aa11.84□□□□□ -0.51
COL9A1-202ENST00000357250 ZNF621Q6ZSS3 439 aa11.84□□□□□ -0.51
COL9A1-202ENST00000357250 OR5B17Q8NGF7 314 aa11.84□□□□□ -0.51
COL9A1-202ENST00000357250 WDR60Q8WVS4 1066 aa11.84□□□□□ -0.51
COL9A1-202ENST00000357250 SHISA4Q96DD7 197 aa11.84□□□□□ -0.51
COL9A1-202ENST00000357250 KLRG1Q96E93 195 aa11.84□□□□□ -0.51
COL9A1-202ENST00000357250 ITGB1BP2Q9UKP3 347 aa11.84□□□□□ -0.51
COL9A1-202ENST00000357250 TSPAN3O60637 253 aa11.84□□□□□ -0.51
COL9A1-202ENST00000357250 ULK1O75385 1050 aa11.84□□□□□ -0.51
COL9A1-202ENST00000357250 IDO1P14902 403 aa11.84□□□□□ -0.51
COL9A1-202ENST00000357250 CCNA2P20248 432 aa11.84□□□□□ -0.51
COL9A1-202ENST00000357250 NTSP30990 170 aa11.84□□□□□ -0.51
COL9A1-202ENST00000357250 MAPK9P45984 424 aa11.84□□□□□ -0.51
COL9A1-202ENST00000357250 TRAF3Q13114 568 aa11.84□□□□□ -0.51
COL9A1-202ENST00000357250 ACOX1Q15067 660 aa11.84□□□□□ -0.51
COL9A1-202ENST00000357250 CYP2R1Q6VVX0 501 aa11.84□□□□□ -0.51
COL9A1-202ENST00000357250 OR8H2Q8N162 312 aa11.84□□□□□ -0.51
COL9A1-202ENST00000357250 DEPDC4Q8N2C3 294 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms