RNA–Protein interactions for RNA: ENST00000355301.8

NPHP1-202, Transcript of nephrocystin 1, humanhuman

TSL 1 (best) BASIC

Gene NPHP1, Length 1,932 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP1-202ENST00000355301 CRADDP78560 199 aa9.72□□□□□ -0.85
NPHP1-202ENST00000355301 ECT2LQ008S8 904 aa9.72□□□□□ -0.85
NPHP1-202ENST00000355301 SLC1A5Q15758 541 aa9.72□□□□□ -0.85
NPHP1-202ENST00000355301 PCSK7Q16549 785 aa9.72□□□□□ -0.85
NPHP1-202ENST00000355301 GAB4Q2WGN9 574 aa9.72□□□□□ -0.85
NPHP1-202ENST00000355301 CERCAMQ5T4B2 595 aa9.72□□□□□ -0.85
NPHP1-202ENST00000355301 ARMC3Q5W041 872 aa9.72□□□□□ -0.85
NPHP1-202ENST00000355301 STEAP4Q687X5 459 aa9.72□□□□□ -0.85
NPHP1-202ENST00000355301 CASC4Q6P4E1 433 aa9.72□□□□□ -0.85
NPHP1-202ENST00000355301 PARM1Q6UWI2 310 aa9.72□□□□□ -0.85
NPHP1-202ENST00000355301 UNC5AQ6ZN44 842 aa9.72□□□□□ -0.85
NPHP1-202ENST00000355301 CAPN12Q6ZSI9 719 aa9.72□□□□□ -0.85
NPHP1-202ENST00000355301 CYS1Q717R9 158 aa9.72□□□□□ -0.85
NPHP1-202ENST00000355301 GOLGA6L1Q8N7Z2 621 aa9.72□□□□□ -0.85
NPHP1-202ENST00000355301 ST13P5Q8NFI4 369 aaPredicted RBP9.72□□□□□ -0.85
NPHP1-202ENST00000355301 TTC17Q96AE7 1141 aa9.72□□□□□ -0.85
NPHP1-202ENST00000355301 ISG20Q96AZ6 181 aaKnown RBP9.72□□□□□ -0.85
NPHP1-202ENST00000355301 LRCH3Q96II8 777 aa9.72□□□□□ -0.85
NPHP1-202ENST00000355301 FEM1CQ96JP0 617 aa9.72□□□□□ -0.85
NPHP1-202ENST00000355301 FAM161BQ96MY7 647 aa9.72□□□□□ -0.85
NPHP1-202ENST00000355301 CCDC77Q9BR77 488 aa9.72□□□□□ -0.85
NPHP1-202ENST00000355301 PLA2G2FQ9BZM2 168 aa9.72□□□□□ -0.85
NPHP1-202ENST00000355301 ACSS3Q9H6R3 686 aa9.72□□□□□ -0.85
NPHP1-202ENST00000355301 SCUBE2Q9NQ36 999 aa9.72□□□□□ -0.85
NPHP1-202ENST00000355301 SAMD15Q9P1V8 674 aa9.72□□□□□ -0.85
NPHP1-202ENST00000355301 EPS15L1Q9UBC2 864 aa9.72□□□□□ -0.85
NPHP1-202ENST00000355301 FETUBQ9UGM5 382 aa9.72□□□□□ -0.85
NPHP1-202ENST00000355301 RABGEF1Q9UJ41 708 aa9.72□□□□□ -0.85
NPHP1-202ENST00000355301 CD207Q9UJ71 328 aa9.72□□□□□ -0.85
NPHP1-202ENST00000355301 FCF1Q9Y324 198 aaKnown RBP9.72□□□□□ -0.85
NPHP1-202ENST00000355301 USP15Q9Y4E8 981 aaPredicted RBP9.72□□□□□ -0.85
NPHP1-202ENST00000355301 ARIH1Q9Y4X5 557 aaPredicted RBP9.72□□□□□ -0.85
NPHP1-202ENST00000355301 H3BQF6 201 aa9.72□□□□□ -0.85
NPHP1-202ENST00000355301 RASGRF2O14827 1237 aa9.72□□□□□ -0.85
NPHP1-202ENST00000355301 TRIM24O15164 1050 aa9.72□□□□□ -0.85
NPHP1-202ENST00000355301 TULP3O75386 442 aa9.72□□□□□ -0.85
NPHP1-202ENST00000355301 POLBP06746 335 aa9.72□□□□□ -0.85
NPHP1-202ENST00000355301 IVLP07476 585 aa9.72□□□□□ -0.85
NPHP1-202ENST00000355301 ATXN1LP0C7T5 689 aaKnown RBP9.72□□□□□ -0.85
NPHP1-202ENST00000355301 SRCP12931 536 aa9.72□□□□□ -0.85
NPHP1-202ENST00000355301 HLA-DPA1P20036 260 aa9.72□□□□□ -0.85
NPHP1-202ENST00000355301 CTSOP43234 321 aaPredicted RBP9.72□□□□□ -0.85
NPHP1-202ENST00000355301 CSNK1DP48730 415 aa9.72□□□□□ -0.85
NPHP1-202ENST00000355301 CDK18Q07002 472 aa9.72□□□□□ -0.85
NPHP1-202ENST00000355301 RUNX3Q13761 415 aa9.72□□□□□ -0.85
NPHP1-202ENST00000355301 LONRF1Q17RB8 773 aa9.72□□□□□ -0.85
NPHP1-202ENST00000355301 GEN1Q17RS7 908 aa9.72□□□□□ -0.85
NPHP1-202ENST00000355301 KRT71Q3SY84 523 aa9.72□□□□□ -0.85
NPHP1-202ENST00000355301 TMEM215Q68D42 235 aa9.72□□□□□ -0.85
NPHP1-202ENST00000355301 MTSS1LQ765P7 747 aa9.72□□□□□ -0.85
NPHP1-202ENST00000355301 KDELC2Q7Z4H8 507 aa9.72□□□□□ -0.85
NPHP1-202ENST00000355301 TMEM135Q86UB9 458 aa9.72□□□□□ -0.85
NPHP1-202ENST00000355301 C12orf40Q86WS4 652 aa9.72□□□□□ -0.85
NPHP1-202ENST00000355301 YAF2Q8IY57 180 aa9.72□□□□□ -0.85
NPHP1-202ENST00000355301 PIAS4Q8N2W9 510 aaPredicted RBP9.72□□□□□ -0.85
NPHP1-202ENST00000355301 MICALL1Q8N3F8 863 aa9.72□□□□□ -0.85
NPHP1-202ENST00000355301 SH2D3CQ8N5H7 860 aa9.72□□□□□ -0.85
NPHP1-202ENST00000355301 GSDMBQ8TAX9 411 aa9.72□□□□□ -0.85
NPHP1-202ENST00000355301 EPS8L3Q8TE67 593 aaKnown RBP9.72□□□□□ -0.85
NPHP1-202ENST00000355301 CFAP36Q96G28 342 aa9.72□□□□□ -0.85
NPHP1-202ENST00000355301 RPL10LQ96L21 214 aaKnown RBP9.72□□□□□ -0.85
NPHP1-202ENST00000355301 NSMCE3Q96MG7 304 aa9.72□□□□□ -0.85
NPHP1-202ENST00000355301 TRIB3Q96RU7 358 aa9.72□□□□□ -0.85
NPHP1-202ENST00000355301 KXD1Q9BQD3 176 aa9.72□□□□□ -0.85
NPHP1-202ENST00000355301 TRIM56Q9BRZ2 755 aaKnown RBP9.72□□□□□ -0.85
NPHP1-202ENST00000355301 PPCSQ9HAB8 311 aa9.72□□□□□ -0.85
NPHP1-202ENST00000355301 TMBIM4Q9HC24 238 aa9.72□□□□□ -0.85
NPHP1-202ENST00000355301 SLC25A13Q9UJS0 675 aa9.72□□□□□ -0.85
NPHP1-202ENST00000355301 COL4A3Q01955 1670 aa9.72□□□□□ -0.85
NPHP1-202ENST00000355301 FAM237BA0A1B0GVD1 139 aa9.71□□□□□ -0.86
NPHP1-202ENST00000355301 EXOC1LA0A1B0GW35 172 aa9.71□□□□□ -0.86
NPHP1-202ENST00000355301 ALDH1A2O94788 518 aa9.71□□□□□ -0.86
NPHP1-202ENST00000355301 C1QAP02745 245 aa9.71□□□□□ -0.86
NPHP1-202ENST00000355301 TPH1P17752 444 aa9.71□□□□□ -0.86
NPHP1-202ENST00000355301 POLR2EP19388 210 aaKnown RBP9.71□□□□□ -0.86
NPHP1-202ENST00000355301 PRKCHP24723 683 aa9.71□□□□□ -0.86
NPHP1-202ENST00000355301 STX2P32856 288 aa9.71□□□□□ -0.86
NPHP1-202ENST00000355301 CHRNA4P43681 627 aa9.71□□□□□ -0.86
NPHP1-202ENST00000355301 MAPK8P45983 427 aa9.71□□□□□ -0.86
NPHP1-202ENST00000355301 STK19P49842 368 aaPredicted RBP9.71□□□□□ -0.86
NPHP1-202ENST00000355301 VASPP50552 380 aaPredicted RBP9.71□□□□□ -0.86
NPHP1-202ENST00000355301 AP1S1P61966 158 aa9.71□□□□□ -0.86
NPHP1-202ENST00000355301 NR1H3Q13133 447 aa9.71□□□□□ -0.86
NPHP1-202ENST00000355301 MSLNQ13421 630 aaPredicted RBP9.71□□□□□ -0.86
NPHP1-202ENST00000355301 CRYMQ14894 314 aa9.71□□□□□ -0.86
NPHP1-202ENST00000355301 KLHL38Q2WGJ6 581 aa9.71□□□□□ -0.86
NPHP1-202ENST00000355301 PCID2Q5JVF3 399 aa9.71□□□□□ -0.86
NPHP1-202ENST00000355301 SIRPB2Q5JXA9 342 aa9.71□□□□□ -0.86
NPHP1-202ENST00000355301 DGKKQ5KSL6 1271 aa9.71□□□□□ -0.86
NPHP1-202ENST00000355301 MBLAC2Q68D91 279 aa9.71□□□□□ -0.86
NPHP1-202ENST00000355301 NCEH1Q6PIU2 408 aa9.71□□□□□ -0.86
NPHP1-202ENST00000355301 RNF135Q8IUD6 432 aa9.71□□□□□ -0.86
NPHP1-202ENST00000355301 CPA6Q8N4T0 437 aa9.71□□□□□ -0.86
NPHP1-202ENST00000355301 FBF1Q8TES7 1133 aa9.71□□□□□ -0.86
NPHP1-202ENST00000355301 WFIKKN2Q8TEU8 576 aa9.71□□□□□ -0.86
NPHP1-202ENST00000355301 PTCD2Q8WV60 388 aaKnown RBP9.71□□□□□ -0.86
NPHP1-202ENST00000355301 IFT43Q96FT9 208 aa9.71□□□□□ -0.86
NPHP1-202ENST00000355301 PGM2Q96G03 612 aa9.71□□□□□ -0.86
NPHP1-202ENST00000355301 CYTH2Q99418 400 aa9.71□□□□□ -0.86
NPHP1-202ENST00000355301 KIFC1Q9BW19 673 aa9.71□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms