RNA–Protein interactions for RNA: ENST00000355238.10

SYNCRIP-201, Transcript of synaptotagmin binding cytoplasmic RNA interacting protein, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SYNCRIP, Length 6,449 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNCRIP-201ENST00000355238 OR52K1Q8NGK4 314 aa12.82□□□□□ -0.36
SYNCRIP-201ENST00000355238 ZFAND2BQ8WV99 257 aa12.82□□□□□ -0.36
SYNCRIP-201ENST00000355238 NPAS2Q99743 824 aa12.82□□□□□ -0.36
SYNCRIP-201ENST00000355238 RBM4BQ9BQ04 359 aaKnown RBP12.82□□□□□ -0.36
SYNCRIP-201ENST00000355238 RBM4Q9BWF3 364 aaKnown RBP12.82□□□□□ -0.36
SYNCRIP-201ENST00000355238 ZNF112Q9UJU3 913 aa12.82□□□□□ -0.36
SYNCRIP-201ENST00000355238 DGKBQ9Y6T7 804 aa12.82□□□□□ -0.36
SYNCRIP-201ENST00000355238 LGR5O75473 907 aa12.82□□□□□ -0.36
SYNCRIP-201ENST00000355238 BANF1O75531 89 aa12.82□□□□□ -0.36
SYNCRIP-201ENST00000355238 RHOCP08134 193 aa12.82□□□□□ -0.36
SYNCRIP-201ENST00000355238 UMPSP11172 480 aa12.82□□□□□ -0.36
SYNCRIP-201ENST00000355238 PEX2P28328 305 aa12.82□□□□□ -0.36
SYNCRIP-201ENST00000355238 RPL26P61254 145 aaKnown RBP12.82□□□□□ -0.36
SYNCRIP-201ENST00000355238 SCN1BQ07699 218 aa12.82□□□□□ -0.36
SYNCRIP-201ENST00000355238 FRMD7Q6ZUT3 714 aa12.82□□□□□ -0.36
SYNCRIP-201ENST00000355238 PIK3R3Q92569 461 aa12.82□□□□□ -0.36
SYNCRIP-201ENST00000355238 PWWP2AQ96N64 755 aa12.82□□□□□ -0.36
SYNCRIP-201ENST00000355238 MTMR9Q96QG7 549 aa12.82□□□□□ -0.36
SYNCRIP-201ENST00000355238 SAE1Q9UBE0 346 aaPredicted RBP12.82□□□□□ -0.36
SYNCRIP-201ENST00000355238 PTGS2P35354 604 aa12.82□□□□□ -0.36
SYNCRIP-201ENST00000355238 ALDH9A1P49189 494 aa12.82□□□□□ -0.36
SYNCRIP-201ENST00000355238 SLC1A5Q15758 541 aa12.82□□□□□ -0.36
SYNCRIP-201ENST00000355238 PHF13Q86YI8 300 aaPredicted RBP12.82□□□□□ -0.36
SYNCRIP-201ENST00000355238 BRSK2Q8IWQ3 736 aa12.82□□□□□ -0.36
SYNCRIP-201ENST00000355238 FAM126AQ9BYI3 521 aaPredicted RBP12.82□□□□□ -0.36
SYNCRIP-201ENST00000355238 EGFL7Q9UHF1 273 aa12.82□□□□□ -0.36
SYNCRIP-201ENST00000355238 PRELID1Q9Y255 219 aa12.82□□□□□ -0.36
SYNCRIP-201ENST00000355238 ABCA9Q8IUA7 1624 aa12.82□□□□□ -0.36
SYNCRIP-201ENST00000355238 TCRBV5S4A2TA0A5A2 114 aa12.82□□□□□ -0.36
SYNCRIP-201ENST00000355238 RFX3P48380 749 aa12.82□□□□□ -0.36
SYNCRIP-201ENST00000355238 COPZ1P61923 177 aa12.82□□□□□ -0.36
SYNCRIP-201ENST00000355238 NFIXQ14938 502 aa12.82□□□□□ -0.36
SYNCRIP-201ENST00000355238 PSMD5Q16401 504 aa12.82□□□□□ -0.36
SYNCRIP-201ENST00000355238 C12orf56Q8IXR9 622 aa12.82□□□□□ -0.36
SYNCRIP-201ENST00000355238 SPATA20Q8TB22 786 aa12.82□□□□□ -0.36
SYNCRIP-201ENST00000355238 LRRC20Q8TCA0 184 aa12.82□□□□□ -0.36
SYNCRIP-201ENST00000355238 FBXO32Q969P5 355 aa12.82□□□□□ -0.36
SYNCRIP-201ENST00000355238 RNF157Q96PX1 679 aa12.82□□□□□ -0.36
SYNCRIP-201ENST00000355238 PANX3Q96QZ0 392 aa12.82□□□□□ -0.36
SYNCRIP-201ENST00000355238 EBF3Q9H4W6 596 aa12.82□□□□□ -0.36
SYNCRIP-201ENST00000355238 CATSPERZQ9NTU4 200 aa12.82□□□□□ -0.36
SYNCRIP-201ENST00000355238 PMF1-BGLAPU3KQ54 211 aa12.82□□□□□ -0.36
SYNCRIP-201ENST00000355238 BMP10O95393 424 aa12.81□□□□□ -0.36
SYNCRIP-201ENST00000355238 CHRNGP07510 517 aa12.81□□□□□ -0.36
SYNCRIP-201ENST00000355238 ADSLP30566 484 aaPredicted RBP12.81□□□□□ -0.36
SYNCRIP-201ENST00000355238 CCNYL2Q5T2Q4 361 aa12.81□□□□□ -0.36
SYNCRIP-201ENST00000355238 TAF8Q7Z7C8 310 aa12.81□□□□□ -0.36
SYNCRIP-201ENST00000355238 ARMC8Q8IUR7 673 aa12.81□□□□□ -0.36
SYNCRIP-201ENST00000355238 LPCAT1Q8NF37 534 aa12.81□□□□□ -0.36
SYNCRIP-201ENST00000355238 KAT5Q92993 513 aa12.81□□□□□ -0.36
SYNCRIP-201ENST00000355238 DDX43Q9NXZ2 648 aaKnown RBP12.81□□□□□ -0.36
SYNCRIP-201ENST00000355238 ZNF70Q9UC06 446 aaPredicted RBP12.81□□□□□ -0.36
SYNCRIP-201ENST00000355238 SNX6Q9UNH7 406 aa12.81□□□□□ -0.36
SYNCRIP-201ENST00000355238 ADGRB3O60242 1522 aa12.81□□□□□ -0.36
SYNCRIP-201ENST00000355238 SLC28A1O00337 649 aa12.81□□□□□ -0.36
SYNCRIP-201ENST00000355238 FADS2O95864 444 aaKnown RBP12.81□□□□□ -0.36
SYNCRIP-201ENST00000355238 ZPBP2Q6X784 338 aa12.81□□□□□ -0.36
SYNCRIP-201ENST00000355238 P2RY8Q86VZ1 359 aa12.81□□□□□ -0.36
SYNCRIP-201ENST00000355238 OR8H1Q8NGG4 311 aa12.81□□□□□ -0.36
SYNCRIP-201ENST00000355238 PHF10Q8WUB8 498 aaKnown RBP12.81□□□□□ -0.36
SYNCRIP-201ENST00000355238 KCTD4Q8WVF5 259 aa12.81□□□□□ -0.36
SYNCRIP-201ENST00000355238 PURBQ96QR8 312 aaKnown RBP12.81□□□□□ -0.36
SYNCRIP-201ENST00000355238 RHOBTB2Q9BYZ6 727 aa12.81□□□□□ -0.36
SYNCRIP-201ENST00000355238 PHF11Q9UIL8 331 aa12.81□□□□□ -0.36
SYNCRIP-201ENST00000355238 PRRG1O14668 218 aa12.81□□□□□ -0.36
SYNCRIP-201ENST00000355238 KHDRBS3O75525 346 aaKnown RBP12.81□□□□□ -0.36
SYNCRIP-201ENST00000355238 ALDH1A2O94788 518 aa12.81□□□□□ -0.36
SYNCRIP-201ENST00000355238 TRUB2O95900 331 aaKnown RBP12.81□□□□□ -0.36
SYNCRIP-201ENST00000355238 THRBP10828 461 aa12.81□□□□□ -0.36
SYNCRIP-201ENST00000355238 SCNN1BP51168 640 aa12.81□□□□□ -0.36
SYNCRIP-201ENST00000355238 ZNF143P52747 638 aaPredicted RBP12.81□□□□□ -0.36
SYNCRIP-201ENST00000355238 TPTEP56180 551 aa12.81□□□□□ -0.36
SYNCRIP-201ENST00000355238 ECT2LQ008S8 904 aa12.81□□□□□ -0.36
SYNCRIP-201ENST00000355238 FMO1Q01740 532 aa12.81□□□□□ -0.36
SYNCRIP-201ENST00000355238 TUBA3CQ13748 450 aa12.81□□□□□ -0.36
SYNCRIP-201ENST00000355238 FBXO47Q5MNV8 452 aa12.81□□□□□ -0.36
SYNCRIP-201ENST00000355238 TXNDC11Q6PKC3 985 aa12.81□□□□□ -0.36
SYNCRIP-201ENST00000355238 NELL1Q92832 810 aa12.81□□□□□ -0.36
SYNCRIP-201ENST00000355238 MNTQ99583 582 aa12.81□□□□□ -0.36
SYNCRIP-201ENST00000355238 MARCH7Q9H992 704 aa12.81□□□□□ -0.36
SYNCRIP-201ENST00000355238 CAPN10Q9HC96 672 aa12.81□□□□□ -0.36
SYNCRIP-201ENST00000355238 PRDM5Q9NQX1 630 aaPredicted RBP12.81□□□□□ -0.36
SYNCRIP-201ENST00000355238 ANGPT4Q9Y264 503 aa12.81□□□□□ -0.36
SYNCRIP-201ENST00000355238 RAMP2O60895 175 aa12.81□□□□□ -0.36
SYNCRIP-201ENST00000355238 USP12O75317 370 aa12.81□□□□□ -0.36
SYNCRIP-201ENST00000355238 YBX3P16989 372 aaKnown RBP eCLIP12.81□□□□□ -0.361e-8■□□□□ 11.2
SYNCRIP-201ENST00000355238 SDC2P34741 201 aa12.81□□□□□ -0.36
SYNCRIP-201ENST00000355238 SLC26A2P50443 739 aa12.81□□□□□ -0.36
SYNCRIP-201ENST00000355238 AQP4P55087 323 aa12.81□□□□□ -0.36
SYNCRIP-201ENST00000355238 ARMC6Q6NXE6 501 aa12.81□□□□□ -0.36
SYNCRIP-201ENST00000355238 OTOP1Q7RTM1 612 aa12.81□□□□□ -0.36
SYNCRIP-201ENST00000355238 MIB1Q86YT6 1006 aa12.81□□□□□ -0.36
SYNCRIP-201ENST00000355238 DQX1Q8TE96 717 aaKnown RBP12.81□□□□□ -0.36
SYNCRIP-201ENST00000355238 ADI1Q9BV57 179 aa12.81□□□□□ -0.36
SYNCRIP-201ENST00000355238 ASB7Q9H672 318 aa12.81□□□□□ -0.36
SYNCRIP-201ENST00000355238 GPN1Q9HCN4 374 aaPredicted RBP12.81□□□□□ -0.36
SYNCRIP-201ENST00000355238 GNPTGQ9UJJ9 305 aa12.81□□□□□ -0.36
SYNCRIP-201ENST00000355238 AZIN1O14977 448 aa12.81□□□□□ -0.36
SYNCRIP-201ENST00000355238 DYNC1LI2O43237 492 aaPredicted RBP12.81□□□□□ -0.36
SYNCRIP-201ENST00000355238 PRLP01236 227 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms