RNA–Protein interactions for RNA: ENST00000345005.8

CLK3-201, Transcript of CDC like kinase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLK3, Length 1,846 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-201ENST00000345005 BMPR1AP36894 532 aa12.99□□□□□ -0.33
CLK3-201ENST00000345005 GEMP55040 296 aa12.99□□□□□ -0.33
CLK3-201ENST00000345005 DYNC1I2Q13409 638 aaKnown RBP12.99□□□□□ -0.33
CLK3-201ENST00000345005 EFTUD2Q15029 972 aaKnown RBP eCLIP12.99□□□□□ -0.336e-7■■■■□ 21.9
CLK3-201ENST00000345005 ATG16L1Q676U5 607 aa12.99□□□□□ -0.33
CLK3-201ENST00000345005 LILRA6Q6PI73 481 aa12.99□□□□□ -0.33
CLK3-201ENST00000345005 SPATA31D4Q6ZUB0 917 aa12.99□□□□□ -0.33
CLK3-201ENST00000345005 TMEM150AQ86TG1 271 aa12.99□□□□□ -0.33
CLK3-201ENST00000345005 SLC26A11Q86WA9 606 aa12.99□□□□□ -0.33
CLK3-201ENST00000345005 TMPRSS6Q8IU80 811 aa12.99□□□□□ -0.33
CLK3-201ENST00000345005 C7orf61Q8IZ16 206 aa12.99□□□□□ -0.33
CLK3-201ENST00000345005 DNAAF3Q8N9W5 541 aa12.99□□□□□ -0.33
CLK3-201ENST00000345005 TCP10LQ8TDR4 215 aa12.99□□□□□ -0.33
CLK3-201ENST00000345005 ARNTL2Q8WYA1 636 aa12.99□□□□□ -0.33
CLK3-201ENST00000345005 KLHL5Q96PQ7 755 aa12.99□□□□□ -0.33
CLK3-201ENST00000345005 SP110Q9HB58 689 aa12.99□□□□□ -0.33
CLK3-201ENST00000345005 NMRK1Q9NWW6 199 aa12.99□□□□□ -0.33
CLK3-201ENST00000345005 KCNK4Q9NYG8 393 aa12.99□□□□□ -0.33
CLK3-201ENST00000345005 MOCS1Q9NZB8 636 aa12.99□□□□□ -0.33
CLK3-201ENST00000345005 GRID1Q9ULK0 1009 aa12.99□□□□□ -0.33
CLK3-201ENST00000345005 RWDD3Q9Y3V2 267 aa12.99□□□□□ -0.33
CLK3-201ENST00000345005 IRAK3Q9Y616 596 aa12.99□□□□□ -0.33
CLK3-201ENST00000345005 FAM159BA6NKW6 160 aa12.99□□□□□ -0.33
CLK3-201ENST00000345005 LPXNO60711 386 aa12.99□□□□□ -0.33
CLK3-201ENST00000345005 ENTPD5O75356 428 aa12.99□□□□□ -0.33
CLK3-201ENST00000345005 CIB2O75838 187 aa12.99□□□□□ -0.33
CLK3-201ENST00000345005 ALDH1A2O94788 518 aa12.99□□□□□ -0.33
CLK3-201ENST00000345005 POLBP06746 335 aa12.99□□□□□ -0.33
CLK3-201ENST00000345005 MBL2P11226 248 aaPredicted RBP12.99□□□□□ -0.33
CLK3-201ENST00000345005 CORO1AP31146 461 aaKnown RBP12.99□□□□□ -0.33
CLK3-201ENST00000345005 SLC6A4P31645 630 aa12.99□□□□□ -0.33
CLK3-201ENST00000345005 PEX19P40855 299 aa12.99□□□□□ -0.33
CLK3-201ENST00000345005 CDH4P55283 916 aa12.99□□□□□ -0.33
CLK3-201ENST00000345005 SLC18A2Q05940 514 aa12.99□□□□□ -0.33
CLK3-201ENST00000345005 IL10RBQ08334 325 aa12.99□□□□□ -0.33
CLK3-201ENST00000345005 SERINC3Q13530 473 aa12.99□□□□□ -0.33
CLK3-201ENST00000345005 DBN1Q16643 649 aa12.99□□□□□ -0.33
CLK3-201ENST00000345005 DNAL1Q4LDG9 190 aa12.99□□□□□ -0.33
CLK3-201ENST00000345005 ADGRF1Q5T601 910 aa12.99□□□□□ -0.33
CLK3-201ENST00000345005 MARC1Q5VT66 337 aa12.99□□□□□ -0.33
CLK3-201ENST00000345005 LRRC74BQ6ZQY2 392 aa12.99□□□□□ -0.33
CLK3-201ENST00000345005 PRPF39Q86UA1 669 aaKnown RBP12.99□□□□□ -0.33
CLK3-201ENST00000345005 ZNF354CQ86Y25 554 aa12.99□□□□□ -0.33
CLK3-201ENST00000345005 CTAGE3PQ8IX95 158 aa12.99□□□□□ -0.33
CLK3-201ENST00000345005 ELMOD1Q8N336 334 aa12.99□□□□□ -0.33
CLK3-201ENST00000345005 PPM1NQ8N819 430 aa12.99□□□□□ -0.33
CLK3-201ENST00000345005 SPDYE1Q8NFV5 336 aaPredicted RBP12.99□□□□□ -0.33
CLK3-201ENST00000345005 TTC17Q96AE7 1141 aa12.99□□□□□ -0.33
CLK3-201ENST00000345005 SKA1Q96BD8 255 aa12.99□□□□□ -0.33
CLK3-201ENST00000345005 APOPT1Q96IL0 206 aa12.99□□□□□ -0.33
CLK3-201ENST00000345005 MAGEH1Q9H213 219 aa12.99□□□□□ -0.33
CLK3-201ENST00000345005 PLAC1Q9HBJ0 212 aa12.99□□□□□ -0.33
CLK3-201ENST00000345005 ZNF334Q9HCZ1 680 aaPredicted RBP12.99□□□□□ -0.33
CLK3-201ENST00000345005 GKN1Q9NS71 199 aa12.99□□□□□ -0.33
CLK3-201ENST00000345005 SYBUQ9NX95 663 aa12.99□□□□□ -0.33
CLK3-201ENST00000345005 IL1RAPL1Q9NZN1 696 aa12.99□□□□□ -0.33
CLK3-201ENST00000345005 ZNF180Q9UJW8 692 aa12.99□□□□□ -0.33
CLK3-201ENST00000345005 A0A1W2PPM1 405 aa12.98□□□□□ -0.33
CLK3-201ENST00000345005 CLDN11O75508 207 aa12.98□□□□□ -0.33
CLK3-201ENST00000345005 LATS1O95835 1130 aa12.98□□□□□ -0.33
CLK3-201ENST00000345005 PEX11BO96011 259 aa12.98□□□□□ -0.33
CLK3-201ENST00000345005 C1QAP02745 245 aa12.98□□□□□ -0.33
CLK3-201ENST00000345005 KLKB1P03952 638 aa12.98□□□□□ -0.33
CLK3-201ENST00000345005 HLA-DQB2P05538 268 aa12.98□□□□□ -0.33
CLK3-201ENST00000345005 CTNNB1P35222 781 aa12.98□□□□□ -0.33
CLK3-201ENST00000345005 CRADDP78560 199 aa12.98□□□□□ -0.33
CLK3-201ENST00000345005 CDH17Q12864 832 aa12.98□□□□□ -0.33
CLK3-201ENST00000345005 RCN1Q15293 331 aa12.98□□□□□ -0.33
CLK3-201ENST00000345005 TRMT5Q32P41 509 aaKnown RBP12.98□□□□□ -0.33
CLK3-201ENST00000345005 KHDC1Q4VXA5 237 aaKnown RBP12.98□□□□□ -0.33
CLK3-201ENST00000345005 SPANXN3Q5MJ09 141 aa12.98□□□□□ -0.33
CLK3-201ENST00000345005 TTC39BQ5VTQ0 682 aaPredicted RBP12.98□□□□□ -0.33
CLK3-201ENST00000345005 RFWD3Q6PCD5 774 aa12.98□□□□□ -0.33
CLK3-201ENST00000345005 NET1Q7Z628 596 aaPredicted RBP12.98□□□□□ -0.33
CLK3-201ENST00000345005 KREMEN2Q8NCW0 462 aa12.98□□□□□ -0.33
CLK3-201ENST00000345005 TTC8Q8TAM2 541 aa12.98□□□□□ -0.33
CLK3-201ENST00000345005 SCG3Q8WXD2 468 aaKnown RBP12.98□□□□□ -0.33
CLK3-201ENST00000345005 SPOCK2Q92563 424 aa12.98□□□□□ -0.33
CLK3-201ENST00000345005 OXNAD1Q96HP4 312 aaPredicted RBP12.98□□□□□ -0.33
CLK3-201ENST00000345005 TCF25Q9BQ70 676 aa12.98□□□□□ -0.33
CLK3-201ENST00000345005 IL22Q9GZX6 179 aa12.98□□□□□ -0.33
CLK3-201ENST00000345005 IQCGQ9H095 443 aaKnown RBP12.98□□□□□ -0.33
CLK3-201ENST00000345005 IL21Q9HBE4 155 aa12.98□□□□□ -0.33
CLK3-201ENST00000345005 ENTPD7Q9NQZ7 604 aa12.98□□□□□ -0.33
CLK3-201ENST00000345005 ZFP37Q9Y6Q3 630 aaPredicted RBP12.98□□□□□ -0.33
CLK3-201ENST00000345005 HELZP42694 1942 aaKnown RBP12.97□□□□□ -0.33
CLK3-201ENST00000345005 A0A0G2JND7 137 aa12.97□□□□□ -0.33
CLK3-201ENST00000345005 J3KR12 359 aa12.97□□□□□ -0.33
CLK3-201ENST00000345005 USP12O75317 370 aa12.97□□□□□ -0.33
CLK3-201ENST00000345005 KRT37O76014 449 aa12.97□□□□□ -0.33
CLK3-201ENST00000345005 HDCP19113 662 aa12.97□□□□□ -0.33
CLK3-201ENST00000345005 SP100P23497 879 aaPredicted RBP12.97□□□□□ -0.33
CLK3-201ENST00000345005 ADRA1DP25100 572 aa12.97□□□□□ -0.33
CLK3-201ENST00000345005 TNK2Q07912 1038 aa12.97□□□□□ -0.33
CLK3-201ENST00000345005 NAB1Q13506 487 aa12.97□□□□□ -0.33
CLK3-201ENST00000345005 CHST9Q7L1S5 443 aa12.97□□□□□ -0.33
CLK3-201ENST00000345005 CIR1Q86X95 450 aaPredicted RBP12.97□□□□□ -0.33
CLK3-201ENST00000345005 CFAP52Q8N1V2 620 aa12.97□□□□□ -0.33
CLK3-201ENST00000345005 TEX26Q8N6G2 289 aa12.97□□□□□ -0.33
CLK3-201ENST00000345005 MZB1Q8WU39 189 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 124.2 ms