RNA–Protein interactions for RNA: ENST00000341990.8

CNTNAP3B-202, Transcript of contactin associated protein like 3B, humanhuman

TSL 2 BASIC

Gene CNTNAP3B, Length 2,666 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3B-202ENST00000341990 VPS28Q9UK41 221 aa20.18■□□□□ 0.82
CNTNAP3B-202ENST00000341990 RNASEH2AO75792 299 aaKnown RBP20.17■□□□□ 0.82
CNTNAP3B-202ENST00000341990 BCAS2O75934 225 aaPredicted RBP20.17■□□□□ 0.82
CNTNAP3B-202ENST00000341990 ADAM17P78536 824 aa20.17■□□□□ 0.82
CNTNAP3B-202ENST00000341990 PCBP1Q15365 356 aaKnown RBP eCLIP20.17■□□□□ 0.82
CNTNAP3B-202ENST00000341990 PPP1R3AQ16821 1122 aa20.17■□□□□ 0.82
CNTNAP3B-202ENST00000341990 RBM20Q5T481 1227 aaKnown RBP20.17■□□□□ 0.82
CNTNAP3B-202ENST00000341990 TRIM67Q6ZTA4 783 aa20.17■□□□□ 0.82
CNTNAP3B-202ENST00000341990 HMGCLL1Q8TB92 370 aa20.17■□□□□ 0.82
CNTNAP3B-202ENST00000341990 LPPQ93052 612 aa20.17■□□□□ 0.82
CNTNAP3B-202ENST00000341990 ETAA1Q9NY74 926 aa20.17■□□□□ 0.82
CNTNAP3B-202ENST00000341990 A0A1B0GTW7 788 aa20.17■□□□□ 0.82
CNTNAP3B-202ENST00000341990 PRSS51A0A1B0GVH4 220 aa20.17■□□□□ 0.82
CNTNAP3B-202ENST00000341990 STRNO43815 780 aa20.17■□□□□ 0.82
CNTNAP3B-202ENST00000341990 TADA2AO75478 443 aa20.17■□□□□ 0.82
CNTNAP3B-202ENST00000341990 PTK2BQ14289 1009 aa20.17■□□□□ 0.82
CNTNAP3B-202ENST00000341990 PAN2Q504Q3 1202 aaKnown RBP20.17■□□□□ 0.82
CNTNAP3B-202ENST00000341990 LINC00523Q86TU6 105 aa20.17■□□□□ 0.82
CNTNAP3B-202ENST00000341990 ARHGAP12Q8IWW6 846 aa20.17■□□□□ 0.82
CNTNAP3B-202ENST00000341990 ATP6V1E2Q96A05 226 aa20.17■□□□□ 0.82
CNTNAP3B-202ENST00000341990 GAD1Q99259 594 aa20.17■□□□□ 0.82
CNTNAP3B-202ENST00000341990 MRPL46Q9H2W6 279 aaKnown RBP20.17■□□□□ 0.82
CNTNAP3B-202ENST00000341990 NSMCE4AQ9NXX6 385 aa20.17■□□□□ 0.82
CNTNAP3B-202ENST00000341990 DICER1Q9UPY3 1922 aaKnown RBP20.16■□□□□ 0.82
CNTNAP3B-202ENST00000341990 CLPTM1O96005 669 aa20.16■□□□□ 0.82
CNTNAP3B-202ENST00000341990 RPL26P61254 145 aaKnown RBP20.16■□□□□ 0.82
CNTNAP3B-202ENST00000341990 SEPT6Q14141 434 aa20.16■□□□□ 0.82
CNTNAP3B-202ENST00000341990 CSHL1Q14406 222 aa20.16■□□□□ 0.82
CNTNAP3B-202ENST00000341990 SLC5A9Q2M3M2 681 aa20.16■□□□□ 0.82
CNTNAP3B-202ENST00000341990 IQSEC1Q6DN90 963 aa20.16■□□□□ 0.82
CNTNAP3B-202ENST00000341990 ZFP1Q6P2D0 407 aa20.16■□□□□ 0.82
CNTNAP3B-202ENST00000341990 RBM44Q6ZP01 1051 aaKnown RBP20.16■□□□□ 0.82
CNTNAP3B-202ENST00000341990 SETD3Q86TU7 594 aaPredicted RBP20.16■□□□□ 0.82
CNTNAP3B-202ENST00000341990 CNTN4Q8IWV2 1026 aa20.16■□□□□ 0.82
CNTNAP3B-202ENST00000341990 GRIP2Q9C0E4 1043 aa20.16■□□□□ 0.82
CNTNAP3B-202ENST00000341990 TRPV6Q9H1D0 765 aa20.16■□□□□ 0.82
CNTNAP3B-202ENST00000341990 SEMA6AQ9H2E6 1030 aa20.16■□□□□ 0.82
CNTNAP3B-202ENST00000341990 MIOSQ9NXC5 875 aa20.16■□□□□ 0.82
CNTNAP3B-202ENST00000341990 SLC4A7Q9Y6M7 1214 aa20.16■□□□□ 0.82
CNTNAP3B-202ENST00000341990 SLCO1B7G3V0H7 640 aa20.16■□□□□ 0.82
CNTNAP3B-202ENST00000341990 SLC22A2O15244 555 aa20.16■□□□□ 0.82
CNTNAP3B-202ENST00000341990 C1QTNF8P60827 252 aa20.16■□□□□ 0.82
CNTNAP3B-202ENST00000341990 SULT2A1Q06520 285 aa20.16■□□□□ 0.82
CNTNAP3B-202ENST00000341990 IL23RQ5VWK5 629 aa20.16■□□□□ 0.82
CNTNAP3B-202ENST00000341990 DCLRE1AQ6PJP8 1040 aa20.16■□□□□ 0.82
CNTNAP3B-202ENST00000341990 ATPAF2Q8N5M1 289 aa20.16■□□□□ 0.82
CNTNAP3B-202ENST00000341990 DQX1Q8TE96 717 aaKnown RBP20.16■□□□□ 0.82
CNTNAP3B-202ENST00000341990 SLC10A4Q96EP9 437 aa20.16■□□□□ 0.82
CNTNAP3B-202ENST00000341990 UBE2OQ9C0C9 1292 aaKnown RBP20.16■□□□□ 0.82
CNTNAP3B-202ENST00000341990 VCX3AQ9NNX9 186 aa20.16■□□□□ 0.82
CNTNAP3B-202ENST00000341990 RNF181Q9P0P0 153 aa20.16■□□□□ 0.82
CNTNAP3B-202ENST00000341990 CASTOR2A6NHX0 329 aa20.15■□□□□ 0.82
CNTNAP3B-202ENST00000341990 VILLO15195 856 aa20.15■□□□□ 0.82
CNTNAP3B-202ENST00000341990 CACNG3O60359 315 aa20.15■□□□□ 0.82
CNTNAP3B-202ENST00000341990 MT-CO1P00395 513 aa20.15■□□□□ 0.82
CNTNAP3B-202ENST00000341990 F9P00740 461 aa20.15■□□□□ 0.82
CNTNAP3B-202ENST00000341990 BEX3Q00994 111 aa20.15■□□□□ 0.82
CNTNAP3B-202ENST00000341990 RALGDSQ12967 914 aa20.15■□□□□ 0.82
CNTNAP3B-202ENST00000341990 DYNC1I2Q13409 638 aaKnown RBP20.15■□□□□ 0.82
CNTNAP3B-202ENST00000341990 GRB14Q14449 540 aa20.15■□□□□ 0.82
CNTNAP3B-202ENST00000341990 HERC3Q15034 1050 aa20.15■□□□□ 0.82
CNTNAP3B-202ENST00000341990 NADK2Q4G0N4 442 aa20.15■□□□□ 0.82
CNTNAP3B-202ENST00000341990 ARMC3Q5W041 872 aa20.15■□□□□ 0.82
CNTNAP3B-202ENST00000341990 SCAMP5Q8TAC9 235 aa20.15■□□□□ 0.82
CNTNAP3B-202ENST00000341990 PIP4K2CQ8TBX8 421 aa20.15■□□□□ 0.82
CNTNAP3B-202ENST00000341990 MAELQ96JY0 434 aaKnown RBP20.15■□□□□ 0.82
CNTNAP3B-202ENST00000341990 PRPF18Q99633 342 aaKnown RBP20.15■□□□□ 0.82
CNTNAP3B-202ENST00000341990 GLOD4Q9HC38 313 aa20.15■□□□□ 0.82
CNTNAP3B-202ENST00000341990 NCKIPSDQ9NZQ3 722 aa20.15■□□□□ 0.82
CNTNAP3B-202ENST00000341990 AAR2Q9Y312 384 aaKnown RBP20.15■□□□□ 0.82
CNTNAP3B-202ENST00000341990 MTF2Q9Y483 593 aaPredicted RBP20.15■□□□□ 0.82
CNTNAP3B-202ENST00000341990 PCDHGA7Q9Y5G6 932 aa20.15■□□□□ 0.82
CNTNAP3B-202ENST00000341990 E7ENX8 843 aa20.15■□□□□ 0.82
CNTNAP3B-202ENST00000341990 CSPG5O95196 566 aa20.15■□□□□ 0.82
CNTNAP3B-202ENST00000341990 COL6A2P12110 1019 aa20.15■□□□□ 0.82
CNTNAP3B-202ENST00000341990 BDNFP23560 247 aa20.15■□□□□ 0.82
CNTNAP3B-202ENST00000341990 HK2P52789 917 aa20.15■□□□□ 0.82
CNTNAP3B-202ENST00000341990 PRKAA2P54646 552 aa20.15■□□□□ 0.82
CNTNAP3B-202ENST00000341990 NRF1Q16656 503 aa20.15■□□□□ 0.82
CNTNAP3B-202ENST00000341990 UGP2Q16851 508 aa20.15■□□□□ 0.82
CNTNAP3B-202ENST00000341990 TMEM102Q8N9M5 508 aaPredicted RBP20.15■□□□□ 0.82
CNTNAP3B-202ENST00000341990 TRPC7Q9HCX4 862 aa20.15■□□□□ 0.82
CNTNAP3B-202ENST00000341990 RAB26Q9ULW5 256 aa20.15■□□□□ 0.82
CNTNAP3B-202ENST00000341990 TCAF1Q9Y4C2 921 aa20.15■□□□□ 0.82
CNTNAP3B-202ENST00000341990 TTC3P53804 2025 aa20.14■□□□□ 0.82
CNTNAP3B-202ENST00000341990 SMIM31A0A1B0GVY4 71 aa20.14■□□□□ 0.82
CNTNAP3B-202ENST00000341990 ANKRD33BA6NCL7 494 aa20.14■□□□□ 0.82
CNTNAP3B-202ENST00000341990 MSI1O43347 362 aaKnown RBP20.14■□□□□ 0.82
CNTNAP3B-202ENST00000341990 MAFKO60675 156 aa20.14■□□□□ 0.82
CNTNAP3B-202ENST00000341990 HLA-DQB2P05538 268 aa20.14■□□□□ 0.82
CNTNAP3B-202ENST00000341990 PGFP49763 221 aa20.14■□□□□ 0.82
CNTNAP3B-202ENST00000341990 PCSK7Q16549 785 aa20.14■□□□□ 0.82
CNTNAP3B-202ENST00000341990 LARP7Q4G0J3 582 aaKnown RBP eCLIP20.14■□□□□ 0.82
CNTNAP3B-202ENST00000341990 OLFML2BQ68BL8 750 aa20.14■□□□□ 0.82
CNTNAP3B-202ENST00000341990 PELI3Q8N2H9 469 aa20.14■□□□□ 0.82
CNTNAP3B-202ENST00000341990 PPHLN1Q8NEY8 458 aaKnown RBP20.14■□□□□ 0.82
CNTNAP3B-202ENST00000341990 MYLPFQ96A32 169 aa20.14■□□□□ 0.82
CNTNAP3B-202ENST00000341990 OLFM1Q99784 485 aa20.14■□□□□ 0.82
CNTNAP3B-202ENST00000341990 SLC39A8Q9C0K1 460 aa20.14■□□□□ 0.82
CNTNAP3B-202ENST00000341990 ZNF408Q9H9D4 720 aa20.14■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms