RNA–Protein interactions for RNA: ENST00000332853.8

VSTM4-202, Transcript of V-set and transmembrane domain containing 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VSTM4, Length 6,392 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSTM4-202ENST00000332853 ME2P23368 584 aa13.13□□□□□ -0.31
VSTM4-202ENST00000332853 TKTP29401 623 aaKnown RBP13.13□□□□□ -0.31
VSTM4-202ENST00000332853 HADHBP55084 474 aaKnown RBP13.13□□□□□ -0.31
VSTM4-202ENST00000332853 PATL1Q86TB9 770 aaKnown RBP13.13□□□□□ -0.31
VSTM4-202ENST00000332853 STAG3L4Q8TBR4 150 aa13.13□□□□□ -0.31
VSTM4-202ENST00000332853 B3GALT6Q96L58 329 aa13.13□□□□□ -0.31
VSTM4-202ENST00000332853 NFKBIZQ9BYH8 718 aa13.13□□□□□ -0.31
VSTM4-202ENST00000332853 WDR41Q9HAD4 459 aa13.13□□□□□ -0.31
VSTM4-202ENST00000332853 PSMG1O95456 288 aa13.12□□□□□ -0.31
VSTM4-202ENST00000332853 CYP2A6P11509 494 aaPredicted RBP13.12□□□□□ -0.31
VSTM4-202ENST00000332853 AFTPHQ6ULP2 937 aa13.12□□□□□ -0.31
VSTM4-202ENST00000332853 FAM151BQ6UXP7 276 aa13.12□□□□□ -0.31
VSTM4-202ENST00000332853 PCDH19Q8TAB3 1148 aa13.12□□□□□ -0.31
VSTM4-202ENST00000332853 NR1H4Q96RI1 486 aaPredicted RBP13.12□□□□□ -0.31
VSTM4-202ENST00000332853 HNRNPABQ99729 332 aaKnown RBP13.12□□□□□ -0.31
VSTM4-202ENST00000332853 FAM126AQ9BYI3 521 aaPredicted RBP13.12□□□□□ -0.31
VSTM4-202ENST00000332853 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.12□□□□□ -0.31
VSTM4-202ENST00000332853 SDCBP2Q9H190 292 aa13.12□□□□□ -0.31
VSTM4-202ENST00000332853 FZD10Q9ULW2 581 aa13.12□□□□□ -0.31
VSTM4-202ENST00000332853 EDF1O60869 148 aaKnown RBP13.12□□□□□ -0.31
VSTM4-202ENST00000332853 ATP5F1P24539 256 aaPredicted RBP13.12□□□□□ -0.31
VSTM4-202ENST00000332853 CDK18Q07002 472 aa13.12□□□□□ -0.31
VSTM4-202ENST00000332853 TRAPPC5Q8IUR0 188 aa13.12□□□□□ -0.31
VSTM4-202ENST00000332853 EFR3BQ9Y2G0 817 aa13.12□□□□□ -0.31
VSTM4-202ENST00000332853 PCDHB9Q9Y5E1 797 aa13.12□□□□□ -0.31
VSTM4-202ENST00000332853 MYH1P12882 1939 aa13.12□□□□□ -0.31
VSTM4-202ENST00000332853 YJEFN3A6XGL0 299 aa13.12□□□□□ -0.31
VSTM4-202ENST00000332853 E7ENQ6 273 aa13.12□□□□□ -0.31
VSTM4-202ENST00000332853 PSMD12O00232 456 aaPredicted RBP13.12□□□□□ -0.31
VSTM4-202ENST00000332853 IFRD1O00458 451 aaPredicted RBP13.12□□□□□ -0.31
VSTM4-202ENST00000332853 COX4I1P13073 169 aa13.12□□□□□ -0.31
VSTM4-202ENST00000332853 CYP3A5P20815 502 aa13.12□□□□□ -0.31
VSTM4-202ENST00000332853 GABRR2P28476 465 aa13.12□□□□□ -0.31
VSTM4-202ENST00000332853 ALDH6A1Q02252 535 aaKnown RBP13.12□□□□□ -0.31
VSTM4-202ENST00000332853 CNTN1Q12860 1018 aa13.12□□□□□ -0.31
VSTM4-202ENST00000332853 SCAMP5Q8TAC9 235 aa13.12□□□□□ -0.31
VSTM4-202ENST00000332853 MCOLN3Q8TDD5 553 aa13.12□□□□□ -0.31
VSTM4-202ENST00000332853 AZIN2Q96A70 460 aa13.12□□□□□ -0.31
VSTM4-202ENST00000332853 SELENONQ9NZV5 590 aa13.12□□□□□ -0.31
VSTM4-202ENST00000332853 LRIG2O94898 1065 aa13.12□□□□□ -0.31
VSTM4-202ENST00000332853 MT-CYBP00156 380 aaPredicted RBP13.12□□□□□ -0.31
VSTM4-202ENST00000332853 ACADMP11310 421 aa13.12□□□□□ -0.31
VSTM4-202ENST00000332853 CRHR2Q13324 411 aa13.12□□□□□ -0.31
VSTM4-202ENST00000332853 LIPMQ5VYY2 423 aa13.12□□□□□ -0.31
VSTM4-202ENST00000332853 OR4L1Q8NH43 312 aa13.12□□□□□ -0.31
VSTM4-202ENST00000332853 GFM2Q969S9 779 aaKnown RBP13.12□□□□□ -0.31
VSTM4-202ENST00000332853 CLUHO75153 1309 aa13.12□□□□□ -0.31
VSTM4-202ENST00000332853 VCLP18206 1134 aa13.12□□□□□ -0.31
VSTM4-202ENST00000332853 RPL17P18621 184 aaKnown RBP13.12□□□□□ -0.31
VSTM4-202ENST00000332853 MC4RP32245 332 aa13.12□□□□□ -0.31
VSTM4-202ENST00000332853 GPD2P43304 727 aa13.12□□□□□ -0.31
VSTM4-202ENST00000332853 AIF1P55008 147 aa13.12□□□□□ -0.31
VSTM4-202ENST00000332853 TMEM63BQ5T3F8 832 aa13.12□□□□□ -0.31
VSTM4-202ENST00000332853 LINGO4Q6UY18 593 aa13.12□□□□□ -0.31
VSTM4-202ENST00000332853 MFSD3Q96ES6 412 aa13.12□□□□□ -0.31
VSTM4-202ENST00000332853 MIEF1Q9NQG6 463 aa13.12□□□□□ -0.31
VSTM4-202ENST00000332853 LINC00032P0C843 101 aa13.11□□□□□ -0.31
VSTM4-202ENST00000332853 SELPP16109 830 aa13.11□□□□□ -0.31
VSTM4-202ENST00000332853 SNRPD1P62314 119 aaKnown RBP13.11□□□□□ -0.31
VSTM4-202ENST00000332853 FBXL19Q6PCT2 694 aa13.11□□□□□ -0.31
VSTM4-202ENST00000332853 ZDHHC24Q6UX98 284 aa13.11□□□□□ -0.31
VSTM4-202ENST00000332853 TPD52L3Q96J77 140 aa13.11□□□□□ -0.31
VSTM4-202ENST00000332853 RNF145Q96MT1 663 aa13.11□□□□□ -0.31
VSTM4-202ENST00000332853 PANX3Q96QZ0 392 aa13.11□□□□□ -0.31
VSTM4-202ENST00000332853 EXOSC4Q9NPD3 245 aaKnown RBP13.11□□□□□ -0.31
VSTM4-202ENST00000332853 RABGEF1Q9UJ41 708 aa13.11□□□□□ -0.31
VSTM4-202ENST00000332853 TMEM114B3SHH9 223 aa13.11□□□□□ -0.31
VSTM4-202ENST00000332853 ZBTB14O43829 449 aa13.11□□□□□ -0.31
VSTM4-202ENST00000332853 TPSB2P20231 275 aa13.11□□□□□ -0.31
VSTM4-202ENST00000332853 WARSP23381 471 aaKnown RBP13.11□□□□□ -0.31
VSTM4-202ENST00000332853 DGKAP23743 735 aa13.11□□□□□ -0.31
VSTM4-202ENST00000332853 POU1F1P28069 291 aa13.11□□□□□ -0.31
VSTM4-202ENST00000332853 CDH13P55290 713 aa13.11□□□□□ -0.31
VSTM4-202ENST00000332853 MPP1Q00013 466 aa13.11□□□□□ -0.31
VSTM4-202ENST00000332853 DSC2Q02487 901 aa13.11□□□□□ -0.31
VSTM4-202ENST00000332853 TPSAB1Q15661 275 aa13.11□□□□□ -0.31
VSTM4-202ENST00000332853 MFSD4BQ5TF39 518 aa13.11□□□□□ -0.31
VSTM4-202ENST00000332853 ANKS1BQ7Z6G8 1248 aa13.11□□□□□ -0.31
VSTM4-202ENST00000332853 ELMO1Q92556 727 aa13.11□□□□□ -0.31
VSTM4-202ENST00000332853 MRPL57Q9BQC6 102 aaKnown RBP13.11□□□□□ -0.31
VSTM4-202ENST00000332853 TCRBV7S3A2A0A539 114 aa13.11□□□□□ -0.31
VSTM4-202ENST00000332853 OR6C75A6NL08 312 aa13.11□□□□□ -0.31
VSTM4-202ENST00000332853 A8MUI8 341 aa13.11□□□□□ -0.31
VSTM4-202ENST00000332853 LGR5O75473 907 aa13.11□□□□□ -0.31
VSTM4-202ENST00000332853 F7P08709 466 aaPredicted RBP13.11□□□□□ -0.31
VSTM4-202ENST00000332853 CCT8P50990 548 aa13.11□□□□□ -0.31
VSTM4-202ENST00000332853 FRG1Q14331 258 aaKnown RBP13.11□□□□□ -0.31
VSTM4-202ENST00000332853 ZNF618Q5T7W0 954 aa13.11□□□□□ -0.31
VSTM4-202ENST00000332853 ZNF697Q5TEC3 545 aa13.11□□□□□ -0.31
VSTM4-202ENST00000332853 CNSTQ6PJW8 725 aa13.11□□□□□ -0.31
VSTM4-202ENST00000332853 YTHDF3Q7Z739 585 aaKnown RBP13.11□□□□□ -0.31
VSTM4-202ENST00000332853 ACMSDQ8TDX5 336 aa13.11□□□□□ -0.31
VSTM4-202ENST00000332853 TEPSINQ96N21 525 aa13.11□□□□□ -0.31
VSTM4-202ENST00000332853 PHACTR1Q9C0D0 580 aa13.11□□□□□ -0.31
VSTM4-202ENST00000332853 THG1LQ9NWX6 298 aaKnown RBP13.11□□□□□ -0.31
VSTM4-202ENST00000332853 COMMD8Q9NX08 183 aa13.11□□□□□ -0.31
VSTM4-202ENST00000332853 PDP2Q9P2J9 529 aa13.11□□□□□ -0.31
VSTM4-202ENST00000332853 PLLPQ9Y342 182 aa13.11□□□□□ -0.31
VSTM4-202ENST00000332853 C4BP0C0L5 1744 aa13.11□□□□□ -0.31
VSTM4-202ENST00000332853 MSLNQ13421 630 aaPredicted RBP13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms