RNA–Protein interactions for RNA: ENST00000330374.6

VMA21-201, Transcript of VMA21, vacuolar ATPase assembly factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VMA21, Length 4,717 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMA21-201ENST00000330374 CSE1LP55060 971 aaKnown RBP7.97□□□□□ -1.13
VMA21-201ENST00000330374 BACE1P56817 501 aa7.97□□□□□ -1.13
VMA21-201ENST00000330374 C21orf59P57076 290 aa7.97□□□□□ -1.13
VMA21-201ENST00000330374 GNA12Q03113 381 aa7.97□□□□□ -1.13
VMA21-201ENST00000330374 PRKCQQ04759 706 aa7.97□□□□□ -1.13
VMA21-201ENST00000330374 CD300CQ08708 224 aa7.97□□□□□ -1.13
VMA21-201ENST00000330374 MXD4Q14582 209 aaPredicted RBP7.97□□□□□ -1.13
VMA21-201ENST00000330374 POU6F1Q14863 301 aa7.97□□□□□ -1.13
VMA21-201ENST00000330374 GEN1Q17RS7 908 aa7.97□□□□□ -1.13
VMA21-201ENST00000330374 SLC10A6Q3KNW5 377 aa7.97□□□□□ -1.13
VMA21-201ENST00000330374 C4orf22Q6V702 233 aa7.97□□□□□ -1.13
VMA21-201ENST00000330374 DNAJC14Q6Y2X3 702 aaPredicted RBP7.97□□□□□ -1.13
VMA21-201ENST00000330374 SETD3Q86TU7 594 aaPredicted RBP7.97□□□□□ -1.13
VMA21-201ENST00000330374 CARM1Q86X55 608 aa7.97□□□□□ -1.13
VMA21-201ENST00000330374 SPPL2CQ8IUH8 684 aa7.97□□□□□ -1.13
VMA21-201ENST00000330374 DEFB106AQ8N104 65 aa7.97□□□□□ -1.13
VMA21-201ENST00000330374 LSMEM2Q8N112 164 aa7.97□□□□□ -1.13
VMA21-201ENST00000330374 SEPT1Q8WYJ6 367 aa7.97□□□□□ -1.13
VMA21-201ENST00000330374 ASB9Q96DX5 294 aa7.97□□□□□ -1.13
VMA21-201ENST00000330374 LRCH3Q96II8 777 aa7.97□□□□□ -1.13
VMA21-201ENST00000330374 FTHL17Q9BXU8 183 aa7.97□□□□□ -1.13
VMA21-201ENST00000330374 POMKQ9H5K3 350 aa7.97□□□□□ -1.13
VMA21-201ENST00000330374 INIPQ9NRY2 104 aa7.97□□□□□ -1.13
VMA21-201ENST00000330374 DNMT3AQ9Y6K1 912 aaPredicted RBP7.97□□□□□ -1.13
VMA21-201ENST00000330374 UBR3Q6ZT12 1888 aa7.97□□□□□ -1.13
VMA21-201ENST00000330374 MRASO14807 208 aa7.97□□□□□ -1.13
VMA21-201ENST00000330374 ZBTB24O43167 697 aaPredicted RBP7.97□□□□□ -1.13
VMA21-201ENST00000330374 DDHD2O94830 711 aa7.97□□□□□ -1.13
VMA21-201ENST00000330374 MPOP05164 745 aa7.97□□□□□ -1.13
VMA21-201ENST00000330374 UGT1A1P22309 533 aa7.97□□□□□ -1.13
VMA21-201ENST00000330374 UGT1A4P22310 534 aa7.97□□□□□ -1.13
VMA21-201ENST00000330374 UGT1A3P35503 534 aa7.97□□□□□ -1.13
VMA21-201ENST00000330374 UGT1A5P35504 534 aa7.97□□□□□ -1.13
VMA21-201ENST00000330374 NUMBP49757 651 aa7.97□□□□□ -1.13
VMA21-201ENST00000330374 GJA9P57773 515 aa7.97□□□□□ -1.13
VMA21-201ENST00000330374 TBCELQ5QJ74 424 aa7.97□□□□□ -1.13
VMA21-201ENST00000330374 REP15Q6BDI9 236 aa7.97□□□□□ -1.13
VMA21-201ENST00000330374 CLEC6AQ6EIG7 209 aa7.97□□□□□ -1.13
VMA21-201ENST00000330374 ANKS3Q6ZW76 656 aa7.97□□□□□ -1.13
VMA21-201ENST00000330374 SAMD7Q7Z3H4 446 aa7.97□□□□□ -1.13
VMA21-201ENST00000330374 RNF139Q8WU17 664 aa7.97□□□□□ -1.13
VMA21-201ENST00000330374 ZNF597Q96LX8 424 aa7.97□□□□□ -1.13
VMA21-201ENST00000330374 RANBP9Q96S59 729 aa7.97□□□□□ -1.13
VMA21-201ENST00000330374 ATXN3LQ9H3M9 355 aa7.97□□□□□ -1.13
VMA21-201ENST00000330374 SMOXQ9NWM0 555 aa7.97□□□□□ -1.13
VMA21-201ENST00000330374 SNX10Q9Y5X0 201 aa7.97□□□□□ -1.13
VMA21-201ENST00000330374 SBK3P0C264 359 aa7.96□□□□□ -1.13
VMA21-201ENST00000330374 MLNP12872 115 aa7.96□□□□□ -1.13
VMA21-201ENST00000330374 LRPAP1P30533 357 aa7.96□□□□□ -1.13
VMA21-201ENST00000330374 ALDH3B2P48448 385 aa7.96□□□□□ -1.13
VMA21-201ENST00000330374 PMS2P3Q13401 168 aa7.96□□□□□ -1.13
VMA21-201ENST00000330374 CSHL1Q14406 222 aa7.96□□□□□ -1.13
VMA21-201ENST00000330374 CAPRIN1Q14444 709 aaKnown RBP7.96□□□□□ -1.13
VMA21-201ENST00000330374 BORAQ6PGQ7 559 aa7.96□□□□□ -1.13
VMA21-201ENST00000330374 CNSTQ6PJW8 725 aa7.96□□□□□ -1.13
VMA21-201ENST00000330374 ZYG11AQ6WRX3 759 aa7.96□□□□□ -1.13
VMA21-201ENST00000330374 CELF6Q96J87 481 aaKnown RBP7.96□□□□□ -1.13
VMA21-201ENST00000330374 EFHD1Q9BUP0 239 aa7.96□□□□□ -1.13
VMA21-201ENST00000330374 PTPRHQ9HD43 1115 aa7.96□□□□□ -1.13
VMA21-201ENST00000330374 COQ6Q9Y2Z9 468 aa7.96□□□□□ -1.13
VMA21-201ENST00000330374 C1orf232A0A0U1RR37 186 aa7.96□□□□□ -1.14
VMA21-201ENST00000330374 ZCWPW2A0A1B0GU75 182 aa7.96□□□□□ -1.14
VMA21-201ENST00000330374 K7EPI3 171 aa7.96□□□□□ -1.14
VMA21-201ENST00000330374 UBDO15205 165 aa7.96□□□□□ -1.14
VMA21-201ENST00000330374 IL18RAPO95256 599 aa7.96□□□□□ -1.14
VMA21-201ENST00000330374 KCNH1O95259 989 aa7.96□□□□□ -1.14
VMA21-201ENST00000330374 PARNO95453 639 aaKnown RBP7.96□□□□□ -1.14
VMA21-201ENST00000330374 PGK2P07205 417 aa7.96□□□□□ -1.14
VMA21-201ENST00000330374 CASP2P42575 452 aa7.96□□□□□ -1.14
VMA21-201ENST00000330374 BAG6P46379 1132 aa7.96□□□□□ -1.14
VMA21-201ENST00000330374 RHDQ02161 417 aa7.96□□□□□ -1.14
VMA21-201ENST00000330374 ITKQ08881 620 aa7.96□□□□□ -1.14
VMA21-201ENST00000330374 ITGADQ13349 1161 aa7.96□□□□□ -1.14
VMA21-201ENST00000330374 KIF19Q2TAC6 998 aa7.96□□□□□ -1.14
VMA21-201ENST00000330374 AARS2Q5JTZ9 985 aaKnown RBP7.96□□□□□ -1.14
VMA21-201ENST00000330374 CTU1Q7Z7A3 348 aaKnown RBP7.96□□□□□ -1.14
VMA21-201ENST00000330374 DHFR2Q86XF0 187 aa7.96□□□□□ -1.14
VMA21-201ENST00000330374 CXorf38Q8TB03 319 aa7.96□□□□□ -1.14
VMA21-201ENST00000330374 ELMO2Q96JJ3 720 aa7.96□□□□□ -1.14
VMA21-201ENST00000330374 NAT9Q9BTE0 207 aa7.96□□□□□ -1.14
VMA21-201ENST00000330374 UPF3AQ9H1J1 476 aaKnown RBP7.96□□□□□ -1.14
VMA21-201ENST00000330374 SPON1Q9HCB6 807 aa7.96□□□□□ -1.14
VMA21-201ENST00000330374 TNFRSF12AQ9NP84 129 aa7.96□□□□□ -1.14
VMA21-201ENST00000330374 CACNA2D2Q9NY47 1150 aa7.96□□□□□ -1.14
VMA21-201ENST00000330374 MGAMO43451 1857 aa7.96□□□□□ -1.14
VMA21-201ENST00000330374 BPTFQ12830 3046 aa7.96□□□□□ -1.14
VMA21-201ENST00000330374 M0QYT0 321 aa7.96□□□□□ -1.14
VMA21-201ENST00000330374 SDHDO14521 159 aa7.96□□□□□ -1.14
VMA21-201ENST00000330374 ZNF182P17025 639 aaPredicted RBP7.96□□□□□ -1.14
VMA21-201ENST00000330374 NFKB1P19838 968 aa7.96□□□□□ -1.14
VMA21-201ENST00000330374 RBP5P82980 135 aa7.96□□□□□ -1.14
VMA21-201ENST00000330374 TXNL4AP83876 142 aaKnown RBP7.96□□□□□ -1.14
VMA21-201ENST00000330374 Q6ZNX1 250 aa7.96□□□□□ -1.14
VMA21-201ENST00000330374 FAM83AQ86UY5 434 aa7.96□□□□□ -1.14
VMA21-201ENST00000330374 GPR180Q86V85 440 aa7.96□□□□□ -1.14
VMA21-201ENST00000330374 CEP97Q8IW35 865 aa7.96□□□□□ -1.14
VMA21-201ENST00000330374 DDHD1Q8NEL9 900 aa7.96□□□□□ -1.14
VMA21-201ENST00000330374 GFM2Q969S9 779 aaKnown RBP7.96□□□□□ -1.14
VMA21-201ENST00000330374 YIPF2Q9BWQ6 316 aa7.96□□□□□ -1.14
VMA21-201ENST00000330374 MYOZ2Q9NPC6 264 aa7.96□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms