RNA–Protein interactions for RNA: ENST00000325404.2

SOX2-201, Transcript of SRY-box 2, humanhuman

APPRIS P1 BASIC

Gene SOX2, Length 2,513 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-201ENST00000325404 PPHLN1Q8NEY8 458 aaKnown RBP20.11■□□□□ 0.81
SOX2-201ENST00000325404 RCN3Q96D15 328 aa20.11■□□□□ 0.81
SOX2-201ENST00000325404 RIMS3Q9UJD0 308 aa20.11■□□□□ 0.81
SOX2-201ENST00000325404 MYBPHLA2RUH7 354 aa20.11■□□□□ 0.81
SOX2-201ENST00000325404 M0QZ92 97 aa20.11■□□□□ 0.81
SOX2-201ENST00000325404 TRIM32Q13049 653 aa20.11■□□□□ 0.81
SOX2-201ENST00000325404 AGR3Q8TD06 166 aa20.11■□□□□ 0.81
SOX2-201ENST00000325404 WDR41Q9HAD4 459 aa20.11■□□□□ 0.81
SOX2-201ENST00000325404 NCKIPSDQ9NZQ3 722 aa20.11■□□□□ 0.81
SOX2-201ENST00000325404 CNOT11Q9UKZ1 510 aaKnown RBP20.11■□□□□ 0.81
SOX2-201ENST00000325404 NEMP1O14524 444 aa20.1■□□□□ 0.81
SOX2-201ENST00000325404 HOXC13P31276 330 aa20.1■□□□□ 0.81
SOX2-201ENST00000325404 GEMP55040 296 aa20.1■□□□□ 0.81
SOX2-201ENST00000325404 CACNB2Q08289 660 aaPredicted RBP20.1■□□□□ 0.81
SOX2-201ENST00000325404 PPM1LQ5SGD2 360 aa20.1■□□□□ 0.81
SOX2-201ENST00000325404 DENND5AQ6IQ26 1287 aa20.1■□□□□ 0.81
SOX2-201ENST00000325404 OTOP3Q7RTS5 596 aa20.1■□□□□ 0.81
SOX2-201ENST00000325404 SLC41A1Q8IVJ1 513 aa20.1■□□□□ 0.81
SOX2-201ENST00000325404 GLOD4Q9HC38 313 aa20.1■□□□□ 0.81
SOX2-201ENST00000325404 ENTPD7Q9NQZ7 604 aa20.1■□□□□ 0.81
SOX2-201ENST00000325404 XPR1Q9UBH6 696 aa20.1■□□□□ 0.81
SOX2-201ENST00000325404 TCAF1Q9Y4C2 921 aa20.1■□□□□ 0.81
SOX2-201ENST00000325404 PRSS51A0A1B0GVH4 220 aa20.1■□□□□ 0.81
SOX2-201ENST00000325404 FAM95CA0A1B0GW59 222 aa20.1■□□□□ 0.81
SOX2-201ENST00000325404 DNAJA2O60884 412 aa20.1■□□□□ 0.81
SOX2-201ENST00000325404 AOC2O75106 756 aa20.1■□□□□ 0.81
SOX2-201ENST00000325404 XRCC1P18887 633 aaPredicted RBP20.1■□□□□ 0.81
SOX2-201ENST00000325404 PAMP19021 973 aa20.1■□□□□ 0.81
SOX2-201ENST00000325404 PCSK1P29120 753 aa20.1■□□□□ 0.81
SOX2-201ENST00000325404 POU4F1Q01851 419 aa20.1■□□□□ 0.81
SOX2-201ENST00000325404 ART3Q13508 389 aa20.1■□□□□ 0.81
SOX2-201ENST00000325404 EIF4EBP2Q13542 120 aaPredicted RBP20.1■□□□□ 0.81
SOX2-201ENST00000325404 CEACAM7Q14002 265 aa20.1■□□□□ 0.81
SOX2-201ENST00000325404 FBXL19Q6PCT2 694 aa20.1■□□□□ 0.81
SOX2-201ENST00000325404 KIAA0408Q6ZU52 694 aa20.1■□□□□ 0.81
SOX2-201ENST00000325404 C2CD4AQ8NCU7 369 aaPredicted RBP20.1■□□□□ 0.81
SOX2-201ENST00000325404 CEP70Q8NHQ1 597 aa20.1■□□□□ 0.81
SOX2-201ENST00000325404 PRKD2Q9BZL6 878 aa20.1■□□□□ 0.81
SOX2-201ENST00000325404 ARHGEF38Q9NXL2 777 aa20.1■□□□□ 0.81
SOX2-201ENST00000325404 C15orf38-AP3S2A0A0A6YYH1 394 aa20.09■□□□□ 0.81
SOX2-201ENST00000325404 CAPN8A6NHC0 703 aa20.09■□□□□ 0.81
SOX2-201ENST00000325404 IGLV3-25P01717 112 aa20.09■□□□□ 0.81
SOX2-201ENST00000325404 F7P08709 466 aaPredicted RBP20.09■□□□□ 0.81
SOX2-201ENST00000325404 ADRA1AP35348 466 aa20.09■□□□□ 0.81
SOX2-201ENST00000325404 NKX3-2P78367 333 aa20.09■□□□□ 0.81
SOX2-201ENST00000325404 MRPS6P82932 125 aaKnown RBP20.09■□□□□ 0.81
SOX2-201ENST00000325404 SP3Q02447 781 aa20.09■□□□□ 0.81
SOX2-201ENST00000325404 TWF2Q6IBS0 349 aaKnown RBP20.09■□□□□ 0.81
SOX2-201ENST00000325404 KIAA0930Q6ICG6 404 aaPredicted RBP20.09■□□□□ 0.81
SOX2-201ENST00000325404 ARPINQ7Z6K5 226 aa20.09■□□□□ 0.81
SOX2-201ENST00000325404 TOP1MTQ969P6 601 aa20.09■□□□□ 0.81
SOX2-201ENST00000325404 CCDC126Q96EE4 140 aa20.09■□□□□ 0.81
SOX2-201ENST00000325404 TMEM30AQ9NV96 361 aa20.09■□□□□ 0.81
SOX2-201ENST00000325404 UBP1Q9NZI7 540 aa20.09■□□□□ 0.81
SOX2-201ENST00000325404 NEU3Q9UQ49 428 aa20.09■□□□□ 0.81
SOX2-201ENST00000325404 SCN10AQ9Y5Y9 1956 aa20.09■□□□□ 0.81
SOX2-201ENST00000325404 TCAF2A6NFQ2 919 aa20.09■□□□□ 0.81
SOX2-201ENST00000325404 GOLGA8TH3BQL2 631 aa20.09■□□□□ 0.81
SOX2-201ENST00000325404 MATN3O15232 486 aa20.09■□□□□ 0.81
SOX2-201ENST00000325404 FGF10O15520 208 aaPredicted RBP20.09■□□□□ 0.81
SOX2-201ENST00000325404 ATP5F1P24539 256 aaPredicted RBP20.09■□□□□ 0.81
SOX2-201ENST00000325404 CREB5Q02930 508 aa20.09■□□□□ 0.81
SOX2-201ENST00000325404 TLR1Q15399 786 aa20.09■□□□□ 0.81
SOX2-201ENST00000325404 CHSY3Q70JA7 882 aa20.09■□□□□ 0.81
SOX2-201ENST00000325404 CATSPER2Q96P56 530 aa20.09■□□□□ 0.81
SOX2-201ENST00000325404 TREX1Q9NSU2 369 aa20.09■□□□□ 0.81
SOX2-201ENST00000325404 CLIC5Q9NZA1 410 aa20.09■□□□□ 0.81
SOX2-201ENST00000325404 COPG1Q9Y678 874 aaKnown RBP20.09■□□□□ 0.81
SOX2-201ENST00000325404 PCNTO95613 3336 aa20.09■□□□□ 0.81
SOX2-201ENST00000325404 H0YJX3 145 aa20.08■□□□□ 0.81
SOX2-201ENST00000325404 ACOT8O14734 319 aa20.08■□□□□ 0.81
SOX2-201ENST00000325404 RTN3O95197 1032 aaPredicted RBP20.08■□□□□ 0.81
SOX2-201ENST00000325404 GRIA2P42262 883 aa20.08■□□□□ 0.81
SOX2-201ENST00000325404 CD151P48509 253 aa20.08■□□□□ 0.81
SOX2-201ENST00000325404 CNGA3Q16281 694 aa20.08■□□□□ 0.81
SOX2-201ENST00000325404 PSMD5Q16401 504 aa20.08■□□□□ 0.81
SOX2-201ENST00000325404 BRMS1LQ5PSV4 323 aa20.08■□□□□ 0.81
SOX2-201ENST00000325404 TSTD2Q5T7W7 516 aa20.08■□□□□ 0.81
SOX2-201ENST00000325404 GDF6Q6KF10 455 aaPredicted RBP20.08■□□□□ 0.81
SOX2-201ENST00000325404 TAC4Q86UU9 113 aa20.08■□□□□ 0.81
SOX2-201ENST00000325404 LRRC49Q8IUZ0 686 aa20.08■□□□□ 0.81
SOX2-201ENST00000325404 ARHGAP12Q8IWW6 846 aa20.08■□□□□ 0.81
SOX2-201ENST00000325404 AHI1Q8N157 1196 aa20.08■□□□□ 0.81
SOX2-201ENST00000325404 PELI3Q8N2H9 469 aa20.08■□□□□ 0.81
SOX2-201ENST00000325404 ATPAF2Q8N5M1 289 aa20.08■□□□□ 0.81
SOX2-201ENST00000325404 NAT14Q8WUY8 206 aa20.08■□□□□ 0.81
SOX2-201ENST00000325404 NXNL1Q96CM4 212 aa20.08■□□□□ 0.81
SOX2-201ENST00000325404 GCNAQ96QF7 691 aa20.08■□□□□ 0.81
SOX2-201ENST00000325404 SNX10Q9Y5X0 201 aa20.08■□□□□ 0.81
SOX2-201ENST00000325404 ANKRD33BA6NCL7 494 aa20.08■□□□□ 0.8
SOX2-201ENST00000325404 SDHDO14521 159 aa20.08■□□□□ 0.8
SOX2-201ENST00000325404 ADAMTS4O75173 837 aa20.08■□□□□ 0.8
SOX2-201ENST00000325404 VAPBO95292 243 aa20.08■□□□□ 0.8
SOX2-201ENST00000325404 CD1EP15812 388 aa20.08■□□□□ 0.8
SOX2-201ENST00000325404 ARNTP27540 789 aa20.08■□□□□ 0.8
SOX2-201ENST00000325404 RPL9P32969 192 aaKnown RBP20.08■□□□□ 0.8
SOX2-201ENST00000325404 CCR10P46092 362 aa20.08■□□□□ 0.8
SOX2-201ENST00000325404 GLRBP48167 497 aa20.08■□□□□ 0.8
SOX2-201ENST00000325404 LSAMPQ13449 338 aa20.08■□□□□ 0.8
SOX2-201ENST00000325404 MAPRE2Q15555 327 aa20.08■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms