RNA–Protein interactions for RNA: ENST00000308537.4

PDZRN3-202, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 1 (best) BASIC

Gene PDZRN3, Length 1,136 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-202ENST00000308537 DYRK4Q9NR20 520 aa20.12■□□□□ 0.81
PDZRN3-202ENST00000308537 CWC15Q9P013 229 aaKnown RBP20.12■□□□□ 0.81
PDZRN3-202ENST00000308537 MYO1AQ9UBC5 1043 aa20.12■□□□□ 0.81
PDZRN3-202ENST00000308537 HPCAL4Q9UM19 191 aa20.12■□□□□ 0.81
PDZRN3-202ENST00000308537 ITM2BQ9Y287 266 aa20.12■□□□□ 0.81
PDZRN3-202ENST00000308537 BZW2Q9Y6E2 419 aaKnown RBP20.12■□□□□ 0.81
PDZRN3-202ENST00000308537 SCINQ9Y6U3 715 aa20.12■□□□□ 0.81
PDZRN3-202ENST00000308537 CHD6Q8TD26 2715 aa20.12■□□□□ 0.81
PDZRN3-202ENST00000308537 ANKRD11Q6UB99 2663 aaPredicted RBP20.11■□□□□ 0.81
PDZRN3-202ENST00000308537 EEF2KO00418 725 aaKnown RBP20.11■□□□□ 0.81
PDZRN3-202ENST00000308537 KRIT1O00522 736 aa20.11■□□□□ 0.81
PDZRN3-202ENST00000308537 PRAMEF11O60813 436 aa20.11■□□□□ 0.81
PDZRN3-202ENST00000308537 POP4O95707 220 aaKnown RBP20.11■□□□□ 0.81
PDZRN3-202ENST00000308537 UGT2B4P06133 528 aa20.11■□□□□ 0.81
PDZRN3-202ENST00000308537 PROS1P07225 676 aa20.11■□□□□ 0.81
PDZRN3-202ENST00000308537 ERCC2P18074 760 aa20.11■□□□□ 0.81
PDZRN3-202ENST00000308537 PCK1P35558 622 aa20.11■□□□□ 0.81
PDZRN3-202ENST00000308537 NDST2P52849 883 aa20.11■□□□□ 0.81
PDZRN3-202ENST00000308537 TPM4P67936 248 aa20.11■□□□□ 0.81
PDZRN3-202ENST00000308537 CCDC15Q0P6D6 951 aa20.11■□□□□ 0.81
PDZRN3-202ENST00000308537 CPLX3Q8WVH0 158 aa20.11■□□□□ 0.81
PDZRN3-202ENST00000308537 SKA1Q96BD8 255 aa20.11■□□□□ 0.81
PDZRN3-202ENST00000308537 IQCDQ96DY2 449 aa20.11■□□□□ 0.81
PDZRN3-202ENST00000308537 TRIM11Q96F44 468 aa20.11■□□□□ 0.81
PDZRN3-202ENST00000308537 BMFQ96LC9 184 aa20.11■□□□□ 0.81
PDZRN3-202ENST00000308537 NSMCE3Q96MG7 304 aa20.11■□□□□ 0.81
PDZRN3-202ENST00000308537 CDC6Q99741 560 aa20.11■□□□□ 0.81
PDZRN3-202ENST00000308537 C1QTNF2Q9BXJ5 285 aa20.11■□□□□ 0.81
PDZRN3-202ENST00000308537 GOLGA6L19H0YKK7 550 aa20.1■□□□□ 0.81
PDZRN3-202ENST00000308537 PCDH8O95206 1070 aa20.1■□□□□ 0.81
PDZRN3-202ENST00000308537 CYP1A2P05177 515 aa20.1■□□□□ 0.81
PDZRN3-202ENST00000308537 HNRNPA2B1P22626 353 aaKnown RBP20.1■□□□□ 0.81
PDZRN3-202ENST00000308537 CASP14P31944 242 aa20.1■□□□□ 0.81
PDZRN3-202ENST00000308537 RGRP47804 291 aa20.1■□□□□ 0.81
PDZRN3-202ENST00000308537 HCAR3P49019 387 aa20.1■□□□□ 0.81
PDZRN3-202ENST00000308537 CLDN2P57739 230 aa20.1■□□□□ 0.81
PDZRN3-202ENST00000308537 STAT4Q14765 748 aa20.1■□□□□ 0.81
PDZRN3-202ENST00000308537 DPYSL2Q16555 572 aa20.1■□□□□ 0.81
PDZRN3-202ENST00000308537 SKOR2Q2VWA4 1001 aaPredicted RBP20.1■□□□□ 0.81
PDZRN3-202ENST00000308537 SLC45A4Q5BKX6 768 aa20.1■□□□□ 0.81
PDZRN3-202ENST00000308537 KIAA1161Q6NSJ0 714 aa20.1■□□□□ 0.81
PDZRN3-202ENST00000308537 ARHGAP36Q6ZRI8 547 aa20.1■□□□□ 0.81
PDZRN3-202ENST00000308537 NIPA2Q8N8Q9 360 aa20.1■□□□□ 0.81
PDZRN3-202ENST00000308537 KDF1Q8NAX2 398 aaPredicted RBP20.1■□□□□ 0.81
PDZRN3-202ENST00000308537 OR13H1Q8NG92 308 aa20.1■□□□□ 0.81
PDZRN3-202ENST00000308537 BTBD6Q96KE9 485 aa20.1■□□□□ 0.81
PDZRN3-202ENST00000308537 GDAP1L1Q96MZ0 367 aa20.1■□□□□ 0.81
PDZRN3-202ENST00000308537 KLHL32Q96NJ5 620 aa20.1■□□□□ 0.81
PDZRN3-202ENST00000308537 MRPL47Q9HD33 250 aaKnown RBP20.1■□□□□ 0.81
PDZRN3-202ENST00000308537 LUC7L2Q9Y383 392 aaKnown RBP20.1■□□□□ 0.81
PDZRN3-202ENST00000308537 ACACAQ13085 2346 aa20.1■□□□□ 0.81
PDZRN3-202ENST00000308537 TSPAN11A1L157 253 aa20.09■□□□□ 0.81
PDZRN3-202ENST00000308537 POM121BA6NF01 834 aa20.09■□□□□ 0.81
PDZRN3-202ENST00000308537 TNFSF14O43557 240 aa20.09■□□□□ 0.81
PDZRN3-202ENST00000308537 PRPSAP2O60256 369 aa20.09■□□□□ 0.81
PDZRN3-202ENST00000308537 RNF8O76064 485 aa20.09■□□□□ 0.81
PDZRN3-202ENST00000308537 THEGLP0DJG4 465 aa20.09■□□□□ 0.81
PDZRN3-202ENST00000308537 ITIH2P19823 946 aa20.09■□□□□ 0.81
PDZRN3-202ENST00000308537 PAPOLAP51003 745 aaKnown RBP20.09■□□□□ 0.81
PDZRN3-202ENST00000308537 SLC25A11Q02978 314 aaKnown RBP20.09■□□□□ 0.81
PDZRN3-202ENST00000308537 ACAP1Q15027 740 aa20.09■□□□□ 0.81
PDZRN3-202ENST00000308537 ST3GAL2Q16842 350 aa20.09■□□□□ 0.81
PDZRN3-202ENST00000308537 ASTE1Q2TB18 679 aaPredicted RBP20.09■□□□□ 0.81
PDZRN3-202ENST00000308537 FBXL19Q6PCT2 694 aa20.09■□□□□ 0.81
PDZRN3-202ENST00000308537 GDPD4Q6W3E5 623 aa20.09■□□□□ 0.81
PDZRN3-202ENST00000308537 KDM7AQ6ZMT4 941 aa20.09■□□□□ 0.81
PDZRN3-202ENST00000308537 RAB7BQ96AH8 199 aa20.09■□□□□ 0.81
PDZRN3-202ENST00000308537 EXOC2Q96KP1 924 aa20.09■□□□□ 0.81
PDZRN3-202ENST00000308537 OSBPL1AQ9BXW6 950 aa20.09■□□□□ 0.81
PDZRN3-202ENST00000308537 SLC17A9Q9BYT1 436 aa20.09■□□□□ 0.81
PDZRN3-202ENST00000308537 CPEB1Q9BZB8 566 aaKnown RBP20.09■□□□□ 0.81
PDZRN3-202ENST00000308537 ETNK2Q9NVF9 386 aa20.09■□□□□ 0.81
PDZRN3-202ENST00000308537 YKT6O15498 198 aa20.08■□□□□ 0.81
PDZRN3-202ENST00000308537 PAK4O96013 591 aaPredicted RBP20.08■□□□□ 0.81
PDZRN3-202ENST00000308537 GIMD1P0DJR0 217 aa20.08■□□□□ 0.81
PDZRN3-202ENST00000308537 TIMP2P16035 220 aa20.08■□□□□ 0.81
PDZRN3-202ENST00000308537 RHOAP61586 193 aa20.08■□□□□ 0.81
PDZRN3-202ENST00000308537 RPS21P63220 83 aaKnown RBP20.08■□□□□ 0.81
PDZRN3-202ENST00000308537 PPP6R3Q5H9R7 873 aaPredicted RBP20.08■□□□□ 0.81
PDZRN3-202ENST00000308537 LRRC73Q5JTD7 316 aa20.08■□□□□ 0.81
PDZRN3-202ENST00000308537 TPRG1LQ5T0D9 272 aa20.08■□□□□ 0.81
PDZRN3-202ENST00000308537 ALKBH5Q6P6C2 394 aaKnown RBP20.08■□□□□ 0.81
PDZRN3-202ENST00000308537 CPNE8Q86YQ8 564 aa20.08■□□□□ 0.81
PDZRN3-202ENST00000308537 SLC25A45Q8N413 288 aa20.08■□□□□ 0.81
PDZRN3-202ENST00000308537 RYBPQ8N488 228 aaPredicted RBP20.08■□□□□ 0.81
PDZRN3-202ENST00000308537 OXR1Q8N573 874 aa20.08■□□□□ 0.81
PDZRN3-202ENST00000308537 ASB12Q8WXK4 309 aa20.08■□□□□ 0.81
PDZRN3-202ENST00000308537 TSC1Q92574 1164 aa20.08■□□□□ 0.81
PDZRN3-202ENST00000308537 KLHDC7BQ96G42 594 aa20.08■□□□□ 0.81
PDZRN3-202ENST00000308537 DKK3Q9UBP4 350 aa20.08■□□□□ 0.81
PDZRN3-202ENST00000308537 UBA2Q9UBT2 640 aaPredicted RBP20.08■□□□□ 0.81
PDZRN3-202ENST00000308537 APOBEC2Q9Y235 224 aaKnown RBP20.08■□□□□ 0.81
PDZRN3-202ENST00000308537 HS3ST3A1Q9Y663 406 aa20.08■□□□□ 0.81
PDZRN3-202ENST00000308537 IGLON5A6NGN9 336 aa20.07■□□□□ 0.8
PDZRN3-202ENST00000308537 MUSKO15146 869 aa20.07■□□□□ 0.8
PDZRN3-202ENST00000308537 TSPAN6O43657 245 aa20.07■□□□□ 0.8
PDZRN3-202ENST00000308537 BUB1BO60566 1050 aaPredicted RBP20.07■□□□□ 0.8
PDZRN3-202ENST00000308537 MAGEC1O60732 1142 aa20.07■□□□□ 0.8
PDZRN3-202ENST00000308537 PIGNO95427 931 aa20.07■□□□□ 0.8
PDZRN3-202ENST00000308537 IGSF6O95976 241 aa20.07■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms