RNA–Protein interactions for RNA: ENST00000303354.10

SCN9A-201, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN9A, Length 9,786 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-201ENST00000303354 RPL38P63173 70 aaKnown RBP7.87□□□□□ -1.15
SCN9A-201ENST00000303354 ARF5P84085 180 aa7.87□□□□□ -1.15
SCN9A-201ENST00000303354 PTSQ03393 145 aa7.87□□□□□ -1.15
SCN9A-201ENST00000303354 ZNF268Q14587 947 aaPredicted RBP7.87□□□□□ -1.15
SCN9A-201ENST00000303354 ZNHIT3Q15649 155 aaPredicted RBP7.87□□□□□ -1.15
SCN9A-201ENST00000303354 ZIK1Q3SY52 487 aaPredicted RBP7.87□□□□□ -1.15
SCN9A-201ENST00000303354 IFNL1Q8IU54 200 aa7.87□□□□□ -1.15
SCN9A-201ENST00000303354 ZNF655Q8N720 491 aaPredicted RBP7.87□□□□□ -1.15
SCN9A-201ENST00000303354 C12orf76Q8N812 135 aaPredicted RBP7.87□□□□□ -1.15
SCN9A-201ENST00000303354 ARMC5Q96C12 935 aa7.87□□□□□ -1.15
SCN9A-201ENST00000303354 AVENQ9NQS1 362 aaPredicted RBP7.87□□□□□ -1.15
SCN9A-201ENST00000303354 DDX52Q9Y2R4 599 aaKnown RBP eCLIP7.87□□□□□ -1.15
SCN9A-201ENST00000303354 BCORL1Q5H9F3 1711 aa7.87□□□□□ -1.15
SCN9A-201ENST00000303354 PECAM1P16284 738 aaPredicted RBP7.87□□□□□ -1.15
SCN9A-201ENST00000303354 ERCC2P18074 760 aa7.87□□□□□ -1.15
SCN9A-201ENST00000303354 OC90Q02509 493 aaPredicted RBP7.87□□□□□ -1.15
SCN9A-201ENST00000303354 FPGSQ05932 587 aa7.87□□□□□ -1.15
SCN9A-201ENST00000303354 RGS1Q08116 209 aa7.87□□□□□ -1.15
SCN9A-201ENST00000303354 MGAT5Q09328 741 aa7.87□□□□□ -1.15
SCN9A-201ENST00000303354 GRSF1Q12849 480 aaKnown RBP eCLIP7.87□□□□□ -1.15
SCN9A-201ENST00000303354 DPYSL3Q14195 570 aa7.87□□□□□ -1.15
SCN9A-201ENST00000303354 CERCAMQ5T4B2 595 aa7.87□□□□□ -1.15
SCN9A-201ENST00000303354 METTL27Q8N6F8 245 aaPredicted RBP7.87□□□□□ -1.15
SCN9A-201ENST00000303354 DNAJB14Q8TBM8 379 aa7.87□□□□□ -1.15
SCN9A-201ENST00000303354 GAL3ST1Q99999 423 aa7.87□□□□□ -1.15
SCN9A-201ENST00000303354 KIAA1522Q9P206 1035 aaPredicted RBP7.87□□□□□ -1.15
SCN9A-201ENST00000303354 CPQQ9Y646 472 aa7.87□□□□□ -1.15
SCN9A-201ENST00000303354 CDC42BPAQ5VT25 1732 aa7.86□□□□□ -1.15
SCN9A-201ENST00000303354 FAM220BPB1ANY3 271 aa7.86□□□□□ -1.15
SCN9A-201ENST00000303354 DGKAP23743 735 aa7.86□□□□□ -1.15
SCN9A-201ENST00000303354 TLX1P31314 330 aaPredicted RBP7.86□□□□□ -1.15
SCN9A-201ENST00000303354 MASP1P48740 699 aa7.86□□□□□ -1.15
SCN9A-201ENST00000303354 COPZ1P61923 177 aa7.86□□□□□ -1.15
SCN9A-201ENST00000303354 STX4Q12846 297 aa7.86□□□□□ -1.15
SCN9A-201ENST00000303354 DNAL1Q4LDG9 190 aa7.86□□□□□ -1.15
SCN9A-201ENST00000303354 MPPE1Q53F39 396 aa7.86□□□□□ -1.15
SCN9A-201ENST00000303354 STXBP5Q5T5C0 1151 aa7.86□□□□□ -1.15
SCN9A-201ENST00000303354 OR7D4Q8NG98 312 aa7.86□□□□□ -1.15
SCN9A-201ENST00000303354 NKX2-3Q8TAU0 364 aa7.86□□□□□ -1.15
SCN9A-201ENST00000303354 TRNT1Q96Q11 434 aaKnown RBP7.86□□□□□ -1.15
SCN9A-201ENST00000303354 LACRTQ9GZZ8 138 aa7.86□□□□□ -1.15
SCN9A-201ENST00000303354 GKN1Q9NS71 199 aa7.86□□□□□ -1.15
SCN9A-201ENST00000303354 OGDHLQ9ULD0 1010 aa7.86□□□□□ -1.15
SCN9A-201ENST00000303354 MST1RQ04912 1400 aa7.86□□□□□ -1.15
SCN9A-201ENST00000303354 ZBTB22O15209 634 aa7.86□□□□□ -1.15
SCN9A-201ENST00000303354 RGS14O43566 566 aa7.86□□□□□ -1.15
SCN9A-201ENST00000303354 NR2F1P10589 423 aa7.86□□□□□ -1.15
SCN9A-201ENST00000303354 LAG3P18627 525 aa7.86□□□□□ -1.15
SCN9A-201ENST00000303354 SLC5A3P53794 718 aa7.86□□□□□ -1.15
SCN9A-201ENST00000303354 RCN1Q15293 331 aa7.86□□□□□ -1.15
SCN9A-201ENST00000303354 IL17AQ16552 155 aa7.86□□□□□ -1.15
SCN9A-201ENST00000303354 INTS6LQ5JSJ4 861 aaKnown RBP7.86□□□□□ -1.15
SCN9A-201ENST00000303354 FUT10Q6P4F1 479 aa7.86□□□□□ -1.15
SCN9A-201ENST00000303354 UBE2R2Q712K3 238 aaPredicted RBP7.86□□□□□ -1.15
SCN9A-201ENST00000303354 CTU1Q7Z7A3 348 aaKnown RBP7.86□□□□□ -1.15
SCN9A-201ENST00000303354 ZBTB46Q86UZ6 589 aa7.86□□□□□ -1.15
SCN9A-201ENST00000303354 GPR135Q8IZ08 494 aa7.86□□□□□ -1.15
SCN9A-201ENST00000303354 OR56A4Q8NGH8 313 aa7.86□□□□□ -1.15
SCN9A-201ENST00000303354 HDAC10Q969S8 669 aa7.86□□□□□ -1.15
SCN9A-201ENST00000303354 LINGO1Q96FE5 620 aa7.86□□□□□ -1.15
SCN9A-201ENST00000303354 POLR1BQ9H9Y6 1135 aa7.86□□□□□ -1.15
SCN9A-201ENST00000303354 ZNF624Q9P2J8 865 aaPredicted RBP7.86□□□□□ -1.15
SCN9A-201ENST00000303354 KANSL1LA0AUZ9 987 aa7.86□□□□□ -1.15
SCN9A-201ENST00000303354 PSMD10O75832 226 aa7.86□□□□□ -1.15
SCN9A-201ENST00000303354 C8AP07357 584 aa7.86□□□□□ -1.15
SCN9A-201ENST00000303354 KCNJ5P48544 419 aa7.86□□□□□ -1.15
SCN9A-201ENST00000303354 RASA2Q15283 850 aa7.86□□□□□ -1.15
SCN9A-201ENST00000303354 PTGR2Q8N8N7 351 aaPredicted RBP7.86□□□□□ -1.15
SCN9A-201ENST00000303354 ESAMQ96AP7 390 aa7.86□□□□□ -1.15
SCN9A-201ENST00000303354 KXD1Q9BQD3 176 aa7.86□□□□□ -1.15
SCN9A-201ENST00000303354 CDADC1Q9BWV3 514 aa7.86□□□□□ -1.15
SCN9A-201ENST00000303354 XRN2Q9H0D6 950 aaKnown RBP eCLIP7.86□□□□□ -1.15
SCN9A-201ENST00000303354 ABCB8Q9NUT2 735 aa7.86□□□□□ -1.15
SCN9A-201ENST00000303354 MPOP05164 745 aa7.86□□□□□ -1.15
SCN9A-201ENST00000303354 LMO2P25791 158 aa7.86□□□□□ -1.15
SCN9A-201ENST00000303354 CLK3P49761 638 aaKnown RBP7.86□□□□□ -1.15
SCN9A-201ENST00000303354 CDH13P55290 713 aa7.86□□□□□ -1.15
SCN9A-201ENST00000303354 SCRN3Q0VDG4 424 aa7.86□□□□□ -1.15
SCN9A-201ENST00000303354 SUZ12Q15022 739 aaKnown RBP7.86□□□□□ -1.15
SCN9A-201ENST00000303354 C11orf88Q6PI97 169 aa7.86□□□□□ -1.15
SCN9A-201ENST00000303354 GRASPQ7Z6J2 395 aaPredicted RBP7.86□□□□□ -1.15
SCN9A-201ENST00000303354 ZNF598Q86UK7 904 aaKnown RBP7.86□□□□□ -1.15
SCN9A-201ENST00000303354 FAM35AQ86V20 835 aa7.86□□□□□ -1.15
SCN9A-201ENST00000303354 PSTKQ8IV42 348 aaKnown RBP7.86□□□□□ -1.15
SCN9A-201ENST00000303354 CCDC103Q8IW40 242 aa7.86□□□□□ -1.15
SCN9A-201ENST00000303354 DEFB107AQ8IZN7 70 aa7.86□□□□□ -1.15
SCN9A-201ENST00000303354 GNPTGQ9UJJ9 305 aa7.86□□□□□ -1.15
SCN9A-201ENST00000303354 TMEM114B3SHH9 223 aa7.86□□□□□ -1.15
SCN9A-201ENST00000303354 SLC28A2O43868 658 aa7.86□□□□□ -1.15
SCN9A-201ENST00000303354 RBP1P09455 135 aa7.86□□□□□ -1.15
SCN9A-201ENST00000303354 AQP1P29972 269 aa7.86□□□□□ -1.15
SCN9A-201ENST00000303354 COX10Q12887 443 aa7.86□□□□□ -1.15
SCN9A-201ENST00000303354 ARSIQ5FYB1 569 aa7.86□□□□□ -1.15
SCN9A-201ENST00000303354 MLIPQ5VWP3 458 aa7.86□□□□□ -1.15
SCN9A-201ENST00000303354 ANKRD23Q86SG2 305 aa7.86□□□□□ -1.15
SCN9A-201ENST00000303354 CACTIN-AS1Q8N1I8 211 aa7.86□□□□□ -1.15
SCN9A-201ENST00000303354 C7orf57Q8NEG2 295 aa7.86□□□□□ -1.15
SCN9A-201ENST00000303354 OR4A15Q8NGL6 344 aa7.86□□□□□ -1.15
SCN9A-201ENST00000303354 SLC9A6Q92581 669 aa7.86□□□□□ -1.15
SCN9A-201ENST00000303354 CD248Q9HCU0 757 aa7.86□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms