RNA–Protein interactions for RNA: ENST00000296581.10

LSM6-201, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM6, Length 2,259 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-201ENST00000296581 PER2O15055 1255 aa15.73■□□□□ 0.11
LSM6-201ENST00000296581 KRT38O76015 456 aa15.73■□□□□ 0.11
LSM6-201ENST00000296581 MT-ND3P03897 115 aa15.73■□□□□ 0.11
LSM6-201ENST00000296581 CNTFP26441 200 aa15.73■□□□□ 0.11
LSM6-201ENST00000296581 GCKP35557 465 aa15.73■□□□□ 0.11
LSM6-201ENST00000296581 CHRNA4P43681 627 aa15.73■□□□□ 0.11
LSM6-201ENST00000296581 ARF5P84085 180 aa15.73■□□□□ 0.11
LSM6-201ENST00000296581 ACTN3Q08043 901 aaPredicted RBP15.73■□□□□ 0.11
LSM6-201ENST00000296581 MPPE1Q53F39 396 aa15.73■□□□□ 0.11
LSM6-201ENST00000296581 SH3RF2Q8TEC5 729 aa15.73■□□□□ 0.11
LSM6-201ENST00000296581 ZNF707Q96C28 371 aaPredicted RBP15.73■□□□□ 0.11
LSM6-201ENST00000296581 MTBPQ96DY7 904 aa15.73■□□□□ 0.11
LSM6-201ENST00000296581 ALG14Q96F25 216 aa15.73■□□□□ 0.11
LSM6-201ENST00000296581 FEM1AQ9BSK4 669 aa15.73■□□□□ 0.11
LSM6-201ENST00000296581 CINPQ9BW66 212 aaPredicted RBP15.73■□□□□ 0.11
LSM6-201ENST00000296581 RABEP2Q9H5N1 569 aa15.73■□□□□ 0.11
LSM6-201ENST00000296581 NKIRAS1Q9NYS0 192 aa15.73■□□□□ 0.11
LSM6-201ENST00000296581 LAMA2P24043 3122 aaKnown RBP15.73■□□□□ 0.11
LSM6-201ENST00000296581 TTC24A2A3L6 582 aaPredicted RBP15.73■□□□□ 0.11
LSM6-201ENST00000296581 TRIM49D1C9J1S8 452 aa15.73■□□□□ 0.11
LSM6-201ENST00000296581 CBX4O00257 560 aa15.73■□□□□ 0.11
LSM6-201ENST00000296581 SPAG7O75391 227 aa15.73■□□□□ 0.11
LSM6-201ENST00000296581 CR2P20023 1033 aa15.73■□□□□ 0.11
LSM6-201ENST00000296581 NMBRP28336 390 aa15.73■□□□□ 0.11
LSM6-201ENST00000296581 MZF1P28698 734 aaPredicted RBP15.73■□□□□ 0.11
LSM6-201ENST00000296581 AVPR1AP37288 418 aa15.73■□□□□ 0.11
LSM6-201ENST00000296581 NUMBP49757 651 aa15.73■□□□□ 0.11
LSM6-201ENST00000296581 MSLNQ13421 630 aaPredicted RBP15.73■□□□□ 0.11
LSM6-201ENST00000296581 CYTH1Q15438 398 aa15.73■□□□□ 0.11
LSM6-201ENST00000296581 TLDC1Q6P9B6 456 aa15.73■□□□□ 0.11
LSM6-201ENST00000296581 RASSF3Q86WH2 238 aa15.73■□□□□ 0.11
LSM6-201ENST00000296581 ANKRD42Q8N9B4 389 aa15.73■□□□□ 0.11
LSM6-201ENST00000296581 BANPQ8N9N5 519 aa15.73■□□□□ 0.11
LSM6-201ENST00000296581 PPHLN1Q8NEY8 458 aaKnown RBP15.73■□□□□ 0.11
LSM6-201ENST00000296581 WFDC5Q8TCV5 224 aa15.73■□□□□ 0.11
LSM6-201ENST00000296581 SERAC1Q96JX3 654 aa15.73■□□□□ 0.11
LSM6-201ENST00000296581 RANBP9Q96S59 729 aa15.73■□□□□ 0.11
LSM6-201ENST00000296581 PPANQ9NQ55 473 aaKnown RBP15.73■□□□□ 0.11
LSM6-201ENST00000296581 ZMYM5Q9UJ78 669 aa15.73■□□□□ 0.11
LSM6-201ENST00000296581 CCL26Q9Y258 94 aa15.73■□□□□ 0.11
LSM6-201ENST00000296581 TCAF1Q9Y4C2 921 aa15.73■□□□□ 0.11
LSM6-201ENST00000296581 HMX2A2RU54 273 aa15.72■□□□□ 0.11
LSM6-201ENST00000296581 RASSF9O75901 435 aa15.72■□□□□ 0.11
LSM6-201ENST00000296581 PAPLNO95428 1278 aa15.72■□□□□ 0.11
LSM6-201ENST00000296581 CD160O95971 181 aa15.72■□□□□ 0.11
LSM6-201ENST00000296581 EPOP01588 193 aa15.72■□□□□ 0.11
LSM6-201ENST00000296581 ERVK-10P10266 1014 aa15.72■□□□□ 0.11
LSM6-201ENST00000296581 ADRA1DP25100 572 aa15.72■□□□□ 0.11
LSM6-201ENST00000296581 PBX2P40425 430 aa15.72■□□□□ 0.11
LSM6-201ENST00000296581 SLC18A2Q05940 514 aa15.72■□□□□ 0.11
LSM6-201ENST00000296581 CDH18Q13634 790 aa15.72■□□□□ 0.11
LSM6-201ENST00000296581 POU6F1Q14863 301 aa15.72■□□□□ 0.11
LSM6-201ENST00000296581 SLC1A5Q15758 541 aa15.72■□□□□ 0.11
LSM6-201ENST00000296581 PACS1Q6VY07 963 aa15.72■□□□□ 0.11
LSM6-201ENST00000296581 ADGRD2Q7Z7M1 963 aa15.72■□□□□ 0.11
LSM6-201ENST00000296581 DDI1Q8WTU0 396 aa15.72■□□□□ 0.11
LSM6-201ENST00000296581 USP13Q92995 863 aaPredicted RBP15.72■□□□□ 0.11
LSM6-201ENST00000296581 FEM1CQ96JP0 617 aa15.72■□□□□ 0.11
LSM6-201ENST00000296581 IRAK4Q9NWZ3 460 aa15.72■□□□□ 0.11
LSM6-201ENST00000296581 ZFATQ9P243 1243 aa15.72■□□□□ 0.11
LSM6-201ENST00000296581 GMNCA6NCL1 334 aa15.71■□□□□ 0.11
LSM6-201ENST00000296581 GJB3O75712 270 aa15.71■□□□□ 0.11
LSM6-201ENST00000296581 ATXN1LP0C7T5 689 aaKnown RBP15.71■□□□□ 0.11
LSM6-201ENST00000296581 GBP2P32456 591 aaPredicted RBP15.71■□□□□ 0.11
LSM6-201ENST00000296581 CSKP41240 450 aa15.71■□□□□ 0.11
LSM6-201ENST00000296581 SERPINH1P50454 418 aaKnown RBP15.71■□□□□ 0.11
LSM6-201ENST00000296581 SEC24CP53992 1094 aa15.71■□□□□ 0.11
LSM6-201ENST00000296581 NTHL1P78549 312 aa15.71■□□□□ 0.11
LSM6-201ENST00000296581 ELMSAN1Q6PJG2 1045 aa15.71■□□□□ 0.11
LSM6-201ENST00000296581 TIFABQ6ZNK6 161 aa15.71■□□□□ 0.11
LSM6-201ENST00000296581 KDELC2Q7Z4H8 507 aa15.71■□□□□ 0.11
LSM6-201ENST00000296581 MFN1Q8IWA4 741 aa15.71■□□□□ 0.11
LSM6-201ENST00000296581 DCAF4L2Q8NA75 395 aa15.71■□□□□ 0.11
LSM6-201ENST00000296581 TTC16Q8NEE8 873 aa15.71■□□□□ 0.11
LSM6-201ENST00000296581 MGARPQ8TDB4 240 aa15.71■□□□□ 0.11
LSM6-201ENST00000296581 ZNF778Q96MU6 729 aa15.71■□□□□ 0.11
LSM6-201ENST00000296581 LMAN2LQ9H0V9 348 aa15.71■□□□□ 0.11
LSM6-201ENST00000296581 CPSF2Q9P2I0 782 aaKnown RBP15.71■□□□□ 0.11
LSM6-201ENST00000296581 SLC17A6Q9P2U8 582 aa15.71■□□□□ 0.11
LSM6-201ENST00000296581 PSAT1Q9Y617 370 aa15.71■□□□□ 0.11
LSM6-201ENST00000296581 CCDC195A0A1B0GUA6 201 aa15.71■□□□□ 0.11
LSM6-201ENST00000296581 SNAP91O60641 907 aa15.71■□□□□ 0.11
LSM6-201ENST00000296581 SKAP2O75563 359 aaPredicted RBP15.71■□□□□ 0.11
LSM6-201ENST00000296581 SERPINF2P08697 491 aa15.71■□□□□ 0.11
LSM6-201ENST00000296581 TCF3P15923 654 aa15.71■□□□□ 0.11
LSM6-201ENST00000296581 CES1P23141 567 aa15.71■□□□□ 0.11
LSM6-201ENST00000296581 RGRP47804 291 aa15.71■□□□□ 0.11
LSM6-201ENST00000296581 INO80DQ53TQ3 878 aaPredicted RBP15.71■□□□□ 0.11
LSM6-201ENST00000296581 FYB2Q5VWT5 728 aa15.71■□□□□ 0.11
LSM6-201ENST00000296581 GRASPQ7Z6J2 395 aaPredicted RBP15.71■□□□□ 0.11
LSM6-201ENST00000296581 KCNMB4Q86W47 210 aa15.71■□□□□ 0.11
LSM6-201ENST00000296581 SPATS2Q86XZ4 545 aaKnown RBP15.71■□□□□ 0.11
LSM6-201ENST00000296581 SLC25A41Q8N5S1 370 aa15.71■□□□□ 0.11
LSM6-201ENST00000296581 RIN3Q8TB24 985 aa15.71■□□□□ 0.11
LSM6-201ENST00000296581 THOC1Q96FV9 657 aaKnown RBP15.71■□□□□ 0.11
LSM6-201ENST00000296581 CPNE1Q99829 537 aa15.71■□□□□ 0.11
LSM6-201ENST00000296581 TREX1Q9NSU2 369 aa15.71■□□□□ 0.11
LSM6-201ENST00000296581 TDP1Q9NUW8 608 aa15.71■□□□□ 0.11
LSM6-201ENST00000296581 IL1RAPL1Q9NZN1 696 aa15.71■□□□□ 0.11
LSM6-201ENST00000296581 VPS28Q9UK41 221 aa15.71■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms